RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 MED16Q9Y2X0 877 aa4.21□□□□□ -1.74
UBR3-206ENST00000444475 TO15178 435 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 ZSCAN9O15535 394 aaPredicted RBP4.2□□□□□ -1.74
UBR3-206ENST00000444475 CTAG2O75638 210 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 TK1P04183 234 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 TPOP07202 933 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 XRCC6P12956 609 aaKnown RBP eCLIP4.2□□□□□ -1.74
UBR3-206ENST00000444475 KRT4P19013 534 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 GRM5P41594 1212 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 ATXN3P54252 364 aaPredicted RBP4.2□□□□□ -1.74
UBR3-206ENST00000444475 TBC1D8BQ0IIM8 1120 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 CAPSQ13938 189 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 HABP2Q14520 560 aaPredicted RBP4.2□□□□□ -1.74
UBR3-206ENST00000444475 ADAMTSL4Q6UY14 1074 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 MARK2Q7KZI7 788 aaKnown RBP4.2□□□□□ -1.74
UBR3-206ENST00000444475 OTOAQ7RTW8 1153 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 PLPPR4Q7Z2D5 763 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 CD302Q8IX05 232 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 C10orf53Q8N6V4 93 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 ANKS4BQ8N8V4 417 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 MARCH10Q8NA82 808 aaPredicted RBP4.2□□□□□ -1.74
UBR3-206ENST00000444475 BVESQ8NE79 360 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 ANKRD20A12PQ8NF67 263 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 C11orf24Q96F05 449 aaPredicted RBP4.2□□□□□ -1.74
UBR3-206ENST00000444475 PCED1AQ9H1Q7 454 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 C14orf93Q9H972 538 aaKnown RBP4.2□□□□□ -1.74
UBR3-206ENST00000444475 TMPRSS4Q9NRS4 437 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 TM7SF3Q9NS93 570 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 IPO11Q9UI26 975 aaKnown RBP4.2□□□□□ -1.74
UBR3-206ENST00000444475 BAG5Q9UL15 447 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 TNFSF13BQ9Y275 285 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 CORINQ9Y5Q5 1042 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 XKRY2A2RUG3 117 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 SOWAHBA6NEL2 793 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 GPR89AB7ZAQ6 455 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 NFKBIEO00221 500 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 WNT9AO14904 365 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 TACC1O75410 805 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 GPR89BP0CG08 455 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 DLATP10515 647 aaKnown RBP4.2□□□□□ -1.74
UBR3-206ENST00000444475 NME2P22392 152 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 SFPQP23246 707 aaKnown RBP eCLIP4.2□□□□□ -1.74
UBR3-206ENST00000444475 HOXA6P31267 233 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 PRKAA2P54646 552 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 FSTL1Q12841 308 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 LRMPQ12912 555 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 RIPK1Q13546 671 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 BYSLQ13895 437 aaKnown RBP4.2□□□□□ -1.74
UBR3-206ENST00000444475 TBCEQ15813 527 aaPredicted RBP4.2□□□□□ -1.74
UBR3-206ENST00000444475 SLC5A9Q2M3M2 681 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 C1orf185Q5T7R7 199 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 CYP4F22Q6NT55 531 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 PDZD3Q86UT5 571 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 FAM83AQ86UY5 434 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 ZNF784Q8NCA9 323 aaPredicted RBP4.2□□□□□ -1.74
UBR3-206ENST00000444475 KLHDC4Q8TBB5 520 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 MMADHCQ9H3L0 296 aaPredicted RBP4.2□□□□□ -1.74
UBR3-206ENST00000444475 TMEM165Q9HC07 324 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 WDR6Q9NNW5 1121 aaKnown RBP4.2□□□□□ -1.74
UBR3-206ENST00000444475 SAYSD1Q9NPB0 183 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 ZDHHC7Q9NXF8 308 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 COX16Q9P0S2 106 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 CPSF3Q9UKF6 684 aaKnown RBP4.2□□□□□ -1.74
UBR3-206ENST00000444475 DNM1LO00429 736 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 VEGFDO43915 354 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 DGAT1O75907 488 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 F9P00740 461 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 TPBGLP0DKB5 382 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 YPEL5P62699 121 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 IRX1P78414 480 aaPredicted RBP4.2□□□□□ -1.74
UBR3-206ENST00000444475 HNRNPUQ00839 825 aaKnown RBP eCLIP4.2□□□□□ -1.74
UBR3-206ENST00000444475 SRSF2Q01130 221 aaKnown RBP4.2□□□□□ -1.74
UBR3-206ENST00000444475 PPATQ06203 517 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 HNRNPDQ14103 355 aaKnown RBP4.2□□□□□ -1.74
UBR3-206ENST00000444475 EMC10Q5UCC4 262 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 OLFM4Q6UX06 510 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 SEZ6L2Q6UXD5 910 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 ZNF600Q6ZNG1 722 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 USP49Q70CQ1 688 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 ARMC9Q7Z3E5 817 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 OR52M1Q8NGK5 317 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 ERMNQ8TAM6 284 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 GANCQ8TET4 914 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 HDAC10Q969S8 669 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 FER1L6-AS2Q96M78 137 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 PRICKLE1Q96MT3 831 aaPredicted RBP4.2□□□□□ -1.74
UBR3-206ENST00000444475 DDX50Q9BQ39 737 aaKnown RBP4.2□□□□□ -1.74
UBR3-206ENST00000444475 ERP44Q9BS26 406 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 MTMR12Q9C0I1 747 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 ABHD16BQ9H3Z7 469 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 PNPLA8Q9NP80 782 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 COQ6Q9Y2Z9 468 aa4.2□□□□□ -1.74
UBR3-206ENST00000444475 LOC100653049A0A140TA62 436 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 PTPDC1A2A3K4 754 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 TBC1D4O60343 1298 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 KRT34O76011 436 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 PLCG2P16885 1265 aa4.19□□□□□ -1.74
UBR3-206ENST00000444475 TARSP26639 723 aaKnown RBP4.19□□□□□ -1.74
UBR3-206ENST00000444475 PIP4K2AP48426 406 aaPredicted RBP4.19□□□□□ -1.74
UBR3-206ENST00000444475 ZNF81P51508 661 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms