RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 RTL10Q7L3V2 364 aa17.07■□□□□ 0.32
USP39-205ENST00000442708 C12orf29Q8N999 325 aa17.07■□□□□ 0.32
USP39-205ENST00000442708 SLC4A11Q8NBS3 891 aa17.07■□□□□ 0.32
USP39-205ENST00000442708 STKLD1Q8NE28 680 aa17.07■□□□□ 0.32
USP39-205ENST00000442708 C2orf15Q8WU43 125 aaKnown RBP17.07■□□□□ 0.32
USP39-205ENST00000442708 SEPT5Q99719 369 aaPredicted RBP17.07■□□□□ 0.32
USP39-205ENST00000442708 TSPY26PQ9H489 355 aa17.07■□□□□ 0.32
USP39-205ENST00000442708 POMKQ9H5K3 350 aa17.07■□□□□ 0.32
USP39-205ENST00000442708 HSFX1Q9UBD0 423 aa17.07■□□□□ 0.32
USP39-205ENST00000442708 LGALS16A8MUM7 142 aa17.06■□□□□ 0.32
USP39-205ENST00000442708 BECN2A8MW95 431 aa17.06■□□□□ 0.32
USP39-205ENST00000442708 RNF225M0QZC1 329 aaPredicted RBP17.06■□□□□ 0.32
USP39-205ENST00000442708 CALCAP01258 141 aa17.06■□□□□ 0.32
USP39-205ENST00000442708 BDNFP23560 247 aa17.06■□□□□ 0.32
USP39-205ENST00000442708 TBXAS1P24557 533 aaPredicted RBP17.06■□□□□ 0.32
USP39-205ENST00000442708 ZNF445P59923 1031 aa17.06■□□□□ 0.32
USP39-205ENST00000442708 CYP27A1Q02318 531 aa17.06■□□□□ 0.32
USP39-205ENST00000442708 GCNT1Q02742 428 aa17.06■□□□□ 0.32
USP39-205ENST00000442708 CBX2Q14781 532 aaPredicted RBP17.06■□□□□ 0.32
USP39-205ENST00000442708 SMAD2Q15796 467 aaKnown RBP17.06■□□□□ 0.32
USP39-205ENST00000442708 AAK1Q2M2I8 961 aa17.06■□□□□ 0.32
USP39-205ENST00000442708 CFAP221Q4G0U5 840 aa17.06■□□□□ 0.32
USP39-205ENST00000442708 SDHAF4Q5VUM1 108 aa17.06■□□□□ 0.32
USP39-205ENST00000442708 CES5AQ6NT32 575 aa17.06■□□□□ 0.32
USP39-205ENST00000442708 GRASPQ7Z6J2 395 aaPredicted RBP17.06■□□□□ 0.32
USP39-205ENST00000442708 SPATA2LQ8IUW3 424 aaPredicted RBP17.06■□□□□ 0.32
USP39-205ENST00000442708 FAM200AQ8TCP9 573 aa17.06■□□□□ 0.32
USP39-205ENST00000442708 GPR152Q8TDT2 470 aa17.06■□□□□ 0.32
USP39-205ENST00000442708 TNIP3Q96KP6 325 aa17.06■□□□□ 0.32
USP39-205ENST00000442708 NT5C1AQ9BXI3 368 aa17.06■□□□□ 0.32
USP39-205ENST00000442708 ZNF518BQ9C0D4 1074 aa17.06■□□□□ 0.32
USP39-205ENST00000442708 ABCB6Q9NP58 842 aa17.06■□□□□ 0.32
USP39-205ENST00000442708 UBE2TQ9NPD8 197 aaPredicted RBP17.06■□□□□ 0.32
USP39-205ENST00000442708 FAM49BQ9NUQ9 324 aa17.06■□□□□ 0.32
USP39-205ENST00000442708 DNMT3BQ9UBC3 853 aaKnown RBP17.06■□□□□ 0.32
USP39-205ENST00000442708 CAVIN2O95810 425 aa17.05■□□□□ 0.32
USP39-205ENST00000442708 LRG1P02750 347 aa17.05■□□□□ 0.32
USP39-205ENST00000442708 POU2F2P09086 479 aa17.05■□□□□ 0.32
USP39-205ENST00000442708 CCDC130P13994 396 aa17.05■□□□□ 0.32
USP39-205ENST00000442708 MAPRE1Q15691 268 aaKnown RBP17.05■□□□□ 0.32
USP39-205ENST00000442708 DDR2Q16832 855 aa17.05■□□□□ 0.32
USP39-205ENST00000442708 C4orf50Q6ZRC1 276 aa17.05■□□□□ 0.32
USP39-205ENST00000442708 FAM35AQ86V20 835 aa17.05■□□□□ 0.32
USP39-205ENST00000442708 HS6ST3Q8IZP7 471 aa17.05■□□□□ 0.32
USP39-205ENST00000442708 FUKQ8N0W3 1084 aa17.05■□□□□ 0.32
USP39-205ENST00000442708 GIPC2Q8TF65 315 aa17.05■□□□□ 0.32
USP39-205ENST00000442708 TMEM176AQ96HP8 235 aa17.05■□□□□ 0.32
USP39-205ENST00000442708 FUBP3Q96I24 572 aaKnown RBP eCLIP17.05■□□□□ 0.32
USP39-205ENST00000442708 APEX2Q9UBZ4 518 aa17.05■□□□□ 0.32
USP39-205ENST00000442708 SIK3Q9Y2K2 1263 aa17.05■□□□□ 0.32
USP39-205ENST00000442708 MYH10P35580 1976 aa17.05■□□□□ 0.32
USP39-205ENST00000442708 TEX33O43247 280 aa17.04■□□□□ 0.32
USP39-205ENST00000442708 XYLBO75191 536 aa17.04■□□□□ 0.32
USP39-205ENST00000442708 MTHFRP42898 656 aa17.04■□□□□ 0.32
USP39-205ENST00000442708 MAGEA11P43364 429 aa17.04■□□□□ 0.32
USP39-205ENST00000442708 TUFMP49411 452 aaKnown RBP17.04■□□□□ 0.32
USP39-205ENST00000442708 PTPN21Q16825 1174 aa17.04■□□□□ 0.32
USP39-205ENST00000442708 PUS10Q3MIT2 529 aaKnown RBP17.04■□□□□ 0.32
USP39-205ENST00000442708 ATAT1Q5SQI0 421 aa17.04■□□□□ 0.32
USP39-205ENST00000442708 CYP26C1Q6V0L0 522 aa17.04■□□□□ 0.32
USP39-205ENST00000442708 SLC2A14Q8TDB8 520 aa17.04■□□□□ 0.32
USP39-205ENST00000442708 RIPOR3Q96MK2 946 aa17.04■□□□□ 0.32
USP39-205ENST00000442708 NAP1L5Q96NT1 182 aaPredicted RBP17.04■□□□□ 0.32
USP39-205ENST00000442708 LSM14BQ9BX40 385 aaKnown RBP17.04■□□□□ 0.32
USP39-205ENST00000442708 LRRC3Q9BY71 257 aa17.04■□□□□ 0.32
USP39-205ENST00000442708 FAM124BQ9H5Z6 455 aaPredicted RBP17.04■□□□□ 0.32
USP39-205ENST00000442708 PIDD1Q9HB75 910 aa17.04■□□□□ 0.32
USP39-205ENST00000442708 CNTN6Q9UQ52 1028 aa17.04■□□□□ 0.32
USP39-205ENST00000442708 PCDHB4Q9Y5E5 795 aa17.04■□□□□ 0.32
USP39-205ENST00000442708 DOCK8Q8NF50 2099 aa17.03■□□□□ 0.32
USP39-205ENST00000442708 PATJQ8NI35 1801 aa17.03■□□□□ 0.32
USP39-205ENST00000442708 EPHB6O15197 1021 aa17.03■□□□□ 0.32
USP39-205ENST00000442708 NOL4O94818 638 aa17.03■□□□□ 0.32
USP39-205ENST00000442708 CCR2P41597 374 aa17.03■□□□□ 0.32
USP39-205ENST00000442708 ALDH1A3P47895 512 aa17.03■□□□□ 0.32
USP39-205ENST00000442708 EPHB3P54753 998 aa17.03■□□□□ 0.32
USP39-205ENST00000442708 MTMR3Q13615 1198 aa17.03■□□□□ 0.32
USP39-205ENST00000442708 SLC5A9Q2M3M2 681 aa17.03■□□□□ 0.32
USP39-205ENST00000442708 PPP1R26Q5T8A7 1209 aaPredicted RBP17.03■□□□□ 0.32
USP39-205ENST00000442708 KLHDC7AQ5VTJ3 777 aa17.03■□□□□ 0.32
USP39-205ENST00000442708 IQCEQ6IPM2 695 aa17.03■□□□□ 0.32
USP39-205ENST00000442708 POTEHQ6S545 545 aa17.03■□□□□ 0.32
USP39-205ENST00000442708 TMEM270Q6UE05 265 aa17.03■□□□□ 0.32
USP39-205ENST00000442708 SCN4BQ8IWT1 228 aa17.03■□□□□ 0.32
USP39-205ENST00000442708 TTC39CQ8N584 583 aa17.03■□□□□ 0.32
USP39-205ENST00000442708 ANKRD20A12PQ8NF67 263 aa17.03■□□□□ 0.32
USP39-205ENST00000442708 HEXIM2Q96MH2 286 aaKnown RBP17.03■□□□□ 0.32
USP39-205ENST00000442708 ZSWIM1Q9BR11 485 aa17.03■□□□□ 0.32
USP39-205ENST00000442708 CORO1BQ9BR76 489 aa17.03■□□□□ 0.32
USP39-205ENST00000442708 MED10Q9BTT4 135 aa17.03■□□□□ 0.32
USP39-205ENST00000442708 GANQ9H2C0 597 aa17.03■□□□□ 0.32
USP39-205ENST00000442708 ZNF334Q9HCZ1 680 aaPredicted RBP17.03■□□□□ 0.32
USP39-205ENST00000442708 WDR6Q9NNW5 1121 aaKnown RBP17.03■□□□□ 0.32
USP39-205ENST00000442708 RTN4Q9NQC3 1192 aaKnown RBP17.03■□□□□ 0.32
USP39-205ENST00000442708 FHOD1Q9Y613 1164 aa17.03■□□□□ 0.32
USP39-205ENST00000442708 OBSL1O75147 1896 aa17.03■□□□□ 0.32
USP39-205ENST00000442708 ZNF638Q14966 1978 aaKnown RBP17.02■□□□□ 0.32
USP39-205ENST00000442708 CLUHO75153 1309 aa17.02■□□□□ 0.32
USP39-205ENST00000442708 DENND4CQ5VZ89 1909 aa17.02■□□□□ 0.32
USP39-205ENST00000442708 F8VP50 259 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms