RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 CORO1BQ9BR76 489 aa13.13□□□□□ -0.31
USP1-203ENST00000442679 NT5C1AQ9BXI3 368 aa13.13□□□□□ -0.31
USP1-203ENST00000442679 B3GNT5Q9BYG0 378 aa13.13□□□□□ -0.31
USP1-203ENST00000442679 VPS16Q9H269 839 aa13.13□□□□□ -0.31
USP1-203ENST00000442679 FAM124BQ9H5Z6 455 aaPredicted RBP13.13□□□□□ -0.31
USP1-203ENST00000442679 CEP72Q9P209 647 aa13.13□□□□□ -0.31
USP1-203ENST00000442679 DNMT3BQ9UBC3 853 aaKnown RBP13.13□□□□□ -0.31
USP1-203ENST00000442679 PRKAG3Q9UGI9 489 aa13.13□□□□□ -0.31
USP1-203ENST00000442679 CLUHO75153 1309 aa13.13□□□□□ -0.31
USP1-203ENST00000442679 GTPBP10A4D1E9 387 aaKnown RBP13.12□□□□□ -0.31
USP1-203ENST00000442679 BECN2A8MW95 431 aa13.12□□□□□ -0.31
USP1-203ENST00000442679 CLDN5O00501 218 aa13.12□□□□□ -0.31
USP1-203ENST00000442679 TPM2P07951 284 aa13.12□□□□□ -0.31
USP1-203ENST00000442679 SLC9A1P19634 815 aa13.12□□□□□ -0.31
USP1-203ENST00000442679 BDNFP23560 247 aa13.12□□□□□ -0.31
USP1-203ENST00000442679 FSHRP23945 695 aa13.12□□□□□ -0.31
USP1-203ENST00000442679 MAGEA11P43364 429 aa13.12□□□□□ -0.31
USP1-203ENST00000442679 RPL10AP62906 217 aaKnown RBP13.12□□□□□ -0.31
USP1-203ENST00000442679 DDR2Q16832 855 aa13.12□□□□□ -0.31
USP1-203ENST00000442679 EXOC3L4Q17RC7 722 aa13.12□□□□□ -0.31
USP1-203ENST00000442679 PABPC1LQ4VXU2 614 aaKnown RBP13.12□□□□□ -0.31
USP1-203ENST00000442679 ZNF394Q53GI3 561 aa13.12□□□□□ -0.31
USP1-203ENST00000442679 PHLDB3Q6NSJ2 640 aa13.12□□□□□ -0.31
USP1-203ENST00000442679 POTEHQ6S545 545 aa13.12□□□□□ -0.31
USP1-203ENST00000442679 DNAJB7Q7Z6W7 309 aaPredicted RBP13.12□□□□□ -0.31
USP1-203ENST00000442679 SCN4BQ8IWT1 228 aa13.12□□□□□ -0.31
USP1-203ENST00000442679 C12orf29Q8N999 325 aa13.12□□□□□ -0.31
USP1-203ENST00000442679 GPR152Q8TDT2 470 aa13.12□□□□□ -0.31
USP1-203ENST00000442679 GIPC2Q8TF65 315 aa13.12□□□□□ -0.31
USP1-203ENST00000442679 HEXIM2Q96MH2 286 aaKnown RBP13.12□□□□□ -0.31
USP1-203ENST00000442679 MED10Q9BTT4 135 aa13.12□□□□□ -0.31
USP1-203ENST00000442679 ELOVL4Q9GZR5 314 aa13.12□□□□□ -0.31
USP1-203ENST00000442679 HSD3B7Q9H2F3 369 aa13.12□□□□□ -0.31
USP1-203ENST00000442679 UBE2TQ9NPD8 197 aaPredicted RBP13.12□□□□□ -0.31
USP1-203ENST00000442679 LIMA1Q9UHB6 759 aaKnown RBP13.12□□□□□ -0.31
USP1-203ENST00000442679 ASB3Q9Y575 518 aa13.12□□□□□ -0.31
USP1-203ENST00000442679 BRWD1Q9NSI6 2320 aa13.12□□□□□ -0.31
USP1-203ENST00000442679 ATP8B3O60423 1300 aa13.12□□□□□ -0.31
USP1-203ENST00000442679 CAVIN2O95810 425 aa13.11□□□□□ -0.31
USP1-203ENST00000442679 RHOP08100 348 aa13.11□□□□□ -0.31
USP1-203ENST00000442679 ZNF18P17022 549 aa13.11□□□□□ -0.31
USP1-203ENST00000442679 ATF6P18850 670 aa13.11□□□□□ -0.31
USP1-203ENST00000442679 SP100P23497 879 aaPredicted RBP13.11□□□□□ -0.31
USP1-203ENST00000442679 PON1P27169 355 aa13.11□□□□□ -0.31
USP1-203ENST00000442679 GRIK1P39086 918 aa13.11□□□□□ -0.31
USP1-203ENST00000442679 GPR15P49685 360 aa13.11□□□□□ -0.31
USP1-203ENST00000442679 RAD23BP54727 409 aa13.11□□□□□ -0.31
USP1-203ENST00000442679 GCNT1Q02742 428 aa13.11□□□□□ -0.31
USP1-203ENST00000442679 ZP2Q05996 745 aa13.11□□□□□ -0.31
USP1-203ENST00000442679 VEPH1Q14D04 833 aa13.11□□□□□ -0.31
USP1-203ENST00000442679 IQCB1Q15051 598 aa13.11□□□□□ -0.31
USP1-203ENST00000442679 TAF12Q16514 161 aa13.11□□□□□ -0.31
USP1-203ENST00000442679 CYP4A22Q5TCH4 519 aa13.11□□□□□ -0.31
USP1-203ENST00000442679 SDHAF4Q5VUM1 108 aa13.11□□□□□ -0.31
USP1-203ENST00000442679 TRIM65Q6PJ69 517 aa13.11□□□□□ -0.31
USP1-203ENST00000442679 VSTM1Q6UX27 236 aa13.11□□□□□ -0.31
USP1-203ENST00000442679 ITIH5Q86UX2 942 aa13.11□□□□□ -0.31
USP1-203ENST00000442679 HS6ST3Q8IZP7 471 aa13.11□□□□□ -0.31
USP1-203ENST00000442679 KAT5Q92993 513 aa13.11□□□□□ -0.31
USP1-203ENST00000442679 PSMG2Q969U7 264 aa13.11□□□□□ -0.31
USP1-203ENST00000442679 TMEM176AQ96HP8 235 aa13.11□□□□□ -0.31
USP1-203ENST00000442679 NECAB3Q96P71 396 aaPredicted RBP13.11□□□□□ -0.31
USP1-203ENST00000442679 UHRF1Q96T88 793 aaPredicted RBP13.11□□□□□ -0.31
USP1-203ENST00000442679 ZNF518BQ9C0D4 1074 aa13.11□□□□□ -0.31
USP1-203ENST00000442679 CBX8Q9HC52 389 aa13.11□□□□□ -0.31
USP1-203ENST00000442679 ASAH2Q9NR71 780 aa13.11□□□□□ -0.31
USP1-203ENST00000442679 NR2E1Q9Y466 385 aa13.11□□□□□ -0.31
USP1-203ENST00000442679 PCDHB4Q9Y5E5 795 aa13.11□□□□□ -0.31
USP1-203ENST00000442679 A0A0C4DFX4 3053 aa13.1□□□□□ -0.31
USP1-203ENST00000442679 LRRC10BA6NIK2 292 aa13.1□□□□□ -0.31
USP1-203ENST00000442679 LOC730098B7Z3J9 87 aa13.1□□□□□ -0.31
USP1-203ENST00000442679 MYL4P12829 197 aa13.1□□□□□ -0.31
USP1-203ENST00000442679 CCDC130P13994 396 aa13.1□□□□□ -0.31
USP1-203ENST00000442679 ACO1P21399 889 aaKnown RBP13.1□□□□□ -0.31
USP1-203ENST00000442679 GBP2P32456 591 aaPredicted RBP13.1□□□□□ -0.31
USP1-203ENST00000442679 COPB1P53618 953 aaKnown RBP13.1□□□□□ -0.31
USP1-203ENST00000442679 MFAP3P55082 362 aa13.1□□□□□ -0.31
USP1-203ENST00000442679 APBA1Q02410 837 aa13.1□□□□□ -0.31
USP1-203ENST00000442679 PAQR9Q6ZVX9 377 aa13.1□□□□□ -0.31
USP1-203ENST00000442679 PDZD4Q76G19 769 aaPredicted RBP13.1□□□□□ -0.31
USP1-203ENST00000442679 OTOP3Q7RTS5 596 aa13.1□□□□□ -0.31
USP1-203ENST00000442679 FUKQ8N0W3 1084 aa13.1□□□□□ -0.31
USP1-203ENST00000442679 UBR7Q8N806 425 aa13.1□□□□□ -0.31
USP1-203ENST00000442679 SLC4A11Q8NBS3 891 aa13.1□□□□□ -0.31
USP1-203ENST00000442679 ITFG1Q8TB96 612 aa13.1□□□□□ -0.31
USP1-203ENST00000442679 SLC2A14Q8TDB8 520 aa13.1□□□□□ -0.31
USP1-203ENST00000442679 ACSF2Q96CM8 615 aaPredicted RBP13.1□□□□□ -0.31
USP1-203ENST00000442679 CYFIP2Q96F07 1278 aa13.1□□□□□ -0.31
USP1-203ENST00000442679 KREMEN1Q96MU8 473 aa13.1□□□□□ -0.31
USP1-203ENST00000442679 AVENQ9NQS1 362 aaPredicted RBP13.1□□□□□ -0.31
USP1-203ENST00000442679 FAM49BQ9NUQ9 324 aa13.1□□□□□ -0.31
USP1-203ENST00000442679 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.1□□□□□ -0.31
USP1-203ENST00000442679 APEX2Q9UBZ4 518 aa13.1□□□□□ -0.31
USP1-203ENST00000442679 USTQ9Y2C2 406 aa13.1□□□□□ -0.31
USP1-203ENST00000442679 MRPS23Q9Y3D9 190 aaKnown RBP13.1□□□□□ -0.31
USP1-203ENST00000442679 MTCL1Q9Y4B5 1905 aaKnown RBP13.09□□□□□ -0.31
USP1-203ENST00000442679 C5orf42Q9H799 3197 aa13.09□□□□□ -0.31
USP1-203ENST00000442679 C19orf67A6NJJ6 358 aa13.09□□□□□ -0.31
USP1-203ENST00000442679 ZNF197O14709 1029 aa13.09□□□□□ -0.31
USP1-203ENST00000442679 TRIM66O15016 1216 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms