RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 TARM1B6A8C7 271 aa11.1□□□□□ -0.63
SYNE2-206ENST00000441438 IFIT3O14879 490 aaKnown RBP11.1□□□□□ -0.63
SYNE2-206ENST00000441438 FSBPO95073 299 aa11.1□□□□□ -0.63
SYNE2-206ENST00000441438 PABPC4LP0CB38 370 aaKnown RBP11.1□□□□□ -0.63
SYNE2-206ENST00000441438 CTNNA2P26232 953 aa11.1□□□□□ -0.63
SYNE2-206ENST00000441438 VEPH1Q14D04 833 aa11.1□□□□□ -0.63
SYNE2-206ENST00000441438 CFAP157Q5JU67 520 aa11.1□□□□□ -0.63
SYNE2-206ENST00000441438 SNX30Q5VWJ9 437 aa11.1□□□□□ -0.63
SYNE2-206ENST00000441438 TBC1D9BQ66K14 1250 aa11.1□□□□□ -0.63
SYNE2-206ENST00000441438 SIRT2Q8IXJ6 389 aa11.1□□□□□ -0.63
SYNE2-206ENST00000441438 C12orf56Q8IXR9 622 aa11.1□□□□□ -0.63
SYNE2-206ENST00000441438 ATP2A3Q93084 1043 aa11.1□□□□□ -0.63
SYNE2-206ENST00000441438 PRPF18Q99633 342 aaKnown RBP11.1□□□□□ -0.63
SYNE2-206ENST00000441438 ANAPC5Q9UJX4 755 aa11.1□□□□□ -0.63
SYNE2-206ENST00000441438 SNX6Q9UNH7 406 aa11.1□□□□□ -0.63
SYNE2-206ENST00000441438 AK9Q5TCS8 1911 aa11.1□□□□□ -0.63
SYNE2-206ENST00000441438 MAP3K5Q99683 1374 aa11.09□□□□□ -0.63
SYNE2-206ENST00000441438 DLDP09622 509 aaKnown RBP11.09□□□□□ -0.63
SYNE2-206ENST00000441438 IL15P40933 162 aaPredicted RBP11.09□□□□□ -0.63
SYNE2-206ENST00000441438 BAG6P46379 1132 aa11.09□□□□□ -0.63
SYNE2-206ENST00000441438 RABIFP47224 123 aa11.09□□□□□ -0.63
SYNE2-206ENST00000441438 PPP5CP53041 499 aa11.09□□□□□ -0.63
SYNE2-206ENST00000441438 ERV3-1Q14264 604 aa11.09□□□□□ -0.63
SYNE2-206ENST00000441438 PLCL1Q15111 1095 aa11.09□□□□□ -0.63
SYNE2-206ENST00000441438 SURF1Q15526 300 aa11.09□□□□□ -0.63
SYNE2-206ENST00000441438 ATL3Q6DD88 541 aa11.09□□□□□ -0.63
SYNE2-206ENST00000441438 MRPL50Q8N5N7 158 aaKnown RBP11.09□□□□□ -0.63
SYNE2-206ENST00000441438 OR8K1Q8NGG5 319 aa11.09□□□□□ -0.63
SYNE2-206ENST00000441438 SMARCE1Q969G3 411 aa11.09□□□□□ -0.63
SYNE2-206ENST00000441438 CCDC43Q96MW1 224 aaKnown RBP11.09□□□□□ -0.63
SYNE2-206ENST00000441438 ALS2CR12Q96Q35 445 aa11.09□□□□□ -0.63
SYNE2-206ENST00000441438 C9orf16Q9BUW7 83 aa11.09□□□□□ -0.63
SYNE2-206ENST00000441438 MRM3Q9HC36 420 aaKnown RBP11.09□□□□□ -0.63
SYNE2-206ENST00000441438 SPTLC3Q9NUV7 552 aa11.09□□□□□ -0.63
SYNE2-206ENST00000441438 MARK1Q9P0L2 795 aa11.09□□□□□ -0.63
SYNE2-206ENST00000441438 SENP1Q9P0U3 644 aa11.09□□□□□ -0.63
SYNE2-206ENST00000441438 ORC3Q9UBD5 711 aaPredicted RBP11.09□□□□□ -0.63
SYNE2-206ENST00000441438 CBY1Q9Y3M2 126 aa11.09□□□□□ -0.63
SYNE2-206ENST00000441438 CAPN7Q9Y6W3 813 aa11.09□□□□□ -0.63
SYNE2-206ENST00000441438 PGM3O95394 542 aa11.09□□□□□ -0.63
SYNE2-206ENST00000441438 RB1P06400 928 aa11.09□□□□□ -0.63
SYNE2-206ENST00000441438 ANXA8P13928 327 aa11.09□□□□□ -0.63
SYNE2-206ENST00000441438 IL32P24001 234 aa11.09□□□□□ -0.63
SYNE2-206ENST00000441438 NFKBIAP25963 317 aa11.09□□□□□ -0.63
SYNE2-206ENST00000441438 LSP1P33241 339 aa11.09□□□□□ -0.63
SYNE2-206ENST00000441438 CUL4AQ13619 759 aa11.09□□□□□ -0.63
SYNE2-206ENST00000441438 ANXA8L1Q5VT79 327 aa11.09□□□□□ -0.63
SYNE2-206ENST00000441438 COMTD1Q86VU5 262 aa11.09□□□□□ -0.63
SYNE2-206ENST00000441438 TMEM74Q96NL1 305 aa11.09□□□□□ -0.63
SYNE2-206ENST00000441438 CSRNP1Q96S65 589 aa11.09□□□□□ -0.63
SYNE2-206ENST00000441438 SRCIN1Q9C0H9 1055 aa11.09□□□□□ -0.63
SYNE2-206ENST00000441438 RAD21L1Q9H4I0 556 aa11.09□□□□□ -0.63
SYNE2-206ENST00000441438 OR6C2Q9NZP2 312 aa11.09□□□□□ -0.63
SYNE2-206ENST00000441438 PCDHGA1Q9Y5H4 931 aa11.09□□□□□ -0.63
SYNE2-206ENST00000441438 CFAP99D6REC4 459 aa11.08□□□□□ -0.64
SYNE2-206ENST00000441438 RFC1P35251 1148 aaPredicted RBP11.08□□□□□ -0.64
SYNE2-206ENST00000441438 GNAI1P63096 354 aa11.08□□□□□ -0.64
SYNE2-206ENST00000441438 ROR2Q01974 943 aaKnown RBP11.08□□□□□ -0.64
SYNE2-206ENST00000441438 DSC2Q02487 901 aa11.08□□□□□ -0.64
SYNE2-206ENST00000441438 MRM1Q6IN84 353 aaKnown RBP11.08□□□□□ -0.64
SYNE2-206ENST00000441438 MTDHQ86UE4 582 aaKnown RBP11.08□□□□□ -0.64
SYNE2-206ENST00000441438 ZNF296Q8WUU4 475 aaPredicted RBP11.08□□□□□ -0.64
SYNE2-206ENST00000441438 IRGQQ8WZA9 623 aa11.08□□□□□ -0.64
SYNE2-206ENST00000441438 INPP5DQ92835 1189 aa11.08□□□□□ -0.64
SYNE2-206ENST00000441438 C11orf24Q96F05 449 aaPredicted RBP11.08□□□□□ -0.64
SYNE2-206ENST00000441438 ATP6V0BQ99437 205 aa11.08□□□□□ -0.64
SYNE2-206ENST00000441438 ISCUQ9H1K1 167 aa11.08□□□□□ -0.64
SYNE2-206ENST00000441438 BHMT2Q9H2M3 363 aa11.08□□□□□ -0.64
SYNE2-206ENST00000441438 SERINC1Q9NRX5 453 aa11.08□□□□□ -0.64
SYNE2-206ENST00000441438 TNFSF13BQ9Y275 285 aa11.08□□□□□ -0.64
SYNE2-206ENST00000441438 CIDEAO60543 219 aa11.08□□□□□ -0.64
SYNE2-206ENST00000441438 NOL3O60936 208 aaKnown RBP11.08□□□□□ -0.64
SYNE2-206ENST00000441438 PEX11AO75192 247 aa11.08□□□□□ -0.64
SYNE2-206ENST00000441438 CHRNA1P02708 482 aa11.08□□□□□ -0.64
SYNE2-206ENST00000441438 CCND1P24385 295 aa11.08□□□□□ -0.64
SYNE2-206ENST00000441438 CASP5P51878 434 aa11.08□□□□□ -0.64
SYNE2-206ENST00000441438 BCL2A1Q16548 175 aa11.08□□□□□ -0.64
SYNE2-206ENST00000441438 FAM98CQ17RN3 349 aaKnown RBP11.08□□□□□ -0.64
SYNE2-206ENST00000441438 TAF2Q6P1X5 1199 aa11.08□□□□□ -0.64
SYNE2-206ENST00000441438 SLC22A25Q6T423 547 aa11.08□□□□□ -0.64
SYNE2-206ENST00000441438 C3orf58Q8NDZ4 430 aa11.08□□□□□ -0.64
SYNE2-206ENST00000441438 ZNF671Q8TAW3 534 aa11.08□□□□□ -0.64
SYNE2-206ENST00000441438 TMEM40Q8WWA1 233 aa11.08□□□□□ -0.64
SYNE2-206ENST00000441438 EFHD2Q96C19 240 aaPredicted RBP11.08□□□□□ -0.64
SYNE2-206ENST00000441438 GORASP1Q9BQQ3 440 aa11.08□□□□□ -0.64
SYNE2-206ENST00000441438 TRIM56Q9BRZ2 755 aaKnown RBP11.08□□□□□ -0.64
SYNE2-206ENST00000441438 KIF13BQ9NQT8 1826 aa11.08□□□□□ -0.64
SYNE2-206ENST00000441438 GPR89AB7ZAQ6 455 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 F8W810 466 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 GPR89BP0CG08 455 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 PRKAR1AP10644 381 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 SELLP14151 372 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 FUT4P22083 530 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 RPP30P78346 268 aaKnown RBP11.07□□□□□ -0.64
SYNE2-206ENST00000441438 RBP5P82980 135 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 SLC2A7Q6PXP3 512 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 KIF6Q6ZMV9 814 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 ATCAYQ86WG3 371 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 URGCPQ8TCY9 931 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 RUSC1Q9BVN2 902 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms