RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 FAM13AO94988 1023 aa17.61■□□□□ 0.41
PMS1-213ENST00000441310 ITGB5P18084 799 aa17.61■□□□□ 0.41
PMS1-213ENST00000441310 SPP2Q13103 211 aa17.61■□□□□ 0.41
PMS1-213ENST00000441310 PCNX4Q63HM2 1172 aa17.61■□□□□ 0.41
PMS1-213ENST00000441310 PYDC1Q8WXC3 89 aa17.61■□□□□ 0.41
PMS1-213ENST00000441310 HSPBAP1Q96EW2 488 aa17.61■□□□□ 0.41
PMS1-213ENST00000441310 NUP85Q9BW27 656 aa17.61■□□□□ 0.41
PMS1-213ENST00000441310 HEMGNQ9BXL5 484 aa17.61■□□□□ 0.41
PMS1-213ENST00000441310 INTS2Q9H0H0 1204 aaKnown RBP17.61■□□□□ 0.41
PMS1-213ENST00000441310 VILLO15195 856 aa17.61■□□□□ 0.41
PMS1-213ENST00000441310 FMO5P49326 533 aa17.61■□□□□ 0.41
PMS1-213ENST00000441310 AQP4P55087 323 aa17.61■□□□□ 0.41
PMS1-213ENST00000441310 FASTKD3Q14CZ7 662 aaKnown RBP17.61■□□□□ 0.41
PMS1-213ENST00000441310 RBM15BQ8NDT2 890 aaKnown RBP17.61■□□□□ 0.41
PMS1-213ENST00000441310 SHKBP1Q8TBC3 707 aa17.61■□□□□ 0.41
PMS1-213ENST00000441310 ZNF564Q8TBZ8 553 aaPredicted RBP17.61■□□□□ 0.41
PMS1-213ENST00000441310 PRPF31Q8WWY3 499 aaKnown RBP17.61■□□□□ 0.41
PMS1-213ENST00000441310 CFAP57Q96MR6 1250 aa17.61■□□□□ 0.41
PMS1-213ENST00000441310 NMUR2Q9GZQ4 415 aa17.61■□□□□ 0.41
PMS1-213ENST00000441310 TMEM150BA6NC51 233 aa17.6■□□□□ 0.41
PMS1-213ENST00000441310 TYROBPO43914 113 aa17.6■□□□□ 0.41
PMS1-213ENST00000441310 MYCLP12524 364 aaPredicted RBP17.6■□□□□ 0.41
PMS1-213ENST00000441310 RAP1GDS1P52306 607 aa17.6■□□□□ 0.41
PMS1-213ENST00000441310 CAV1Q03135 178 aa17.6■□□□□ 0.41
PMS1-213ENST00000441310 SULT2A1Q06520 285 aa17.6■□□□□ 0.41
PMS1-213ENST00000441310 COG2Q14746 738 aa17.6■□□□□ 0.41
PMS1-213ENST00000441310 MMEL1Q495T6 779 aa17.6■□□□□ 0.41
PMS1-213ENST00000441310 ALYREFQ86V81 257 aaKnown RBP17.6■□□□□ 0.41
PMS1-213ENST00000441310 FAM160B2Q86V87 743 aa17.6■□□□□ 0.41
PMS1-213ENST00000441310 PDSS2Q86YH6 399 aa17.6■□□□□ 0.41
PMS1-213ENST00000441310 SKA1Q96BD8 255 aa17.6■□□□□ 0.41
PMS1-213ENST00000441310 WNK4Q96J92 1243 aa17.6■□□□□ 0.41
PMS1-213ENST00000441310 TSSK1BQ9BXA7 367 aa17.6■□□□□ 0.41
PMS1-213ENST00000441310 USP29Q9HBJ7 922 aa17.6■□□□□ 0.41
PMS1-213ENST00000441310 BTBD7Q9P203 1132 aa17.6■□□□□ 0.41
PMS1-213ENST00000441310 ZNF536O15090 1300 aa17.6■□□□□ 0.41
PMS1-213ENST00000441310 F8W8V4 182 aa17.6■□□□□ 0.41
PMS1-213ENST00000441310 BUD23O43709 281 aaKnown RBP17.6■□□□□ 0.41
PMS1-213ENST00000441310 COG7P83436 770 aa17.6■□□□□ 0.41
PMS1-213ENST00000441310 ASPHQ12797 758 aa17.6■□□□□ 0.41
PMS1-213ENST00000441310 KLHDC10Q6PID8 442 aa17.6■□□□□ 0.41
PMS1-213ENST00000441310 MTBPQ96DY7 904 aa17.6■□□□□ 0.41
PMS1-213ENST00000441310 TEPSINQ96N21 525 aa17.6■□□□□ 0.41
PMS1-213ENST00000441310 DEFB129Q9H1M3 183 aa17.6■□□□□ 0.41
PMS1-213ENST00000441310 MANSC1Q9H8J5 431 aa17.6■□□□□ 0.41
PMS1-213ENST00000441310 ARHGEF4Q9NR80 690 aa17.6■□□□□ 0.41
PMS1-213ENST00000441310 SLC7A8Q9UHI5 535 aa17.6■□□□□ 0.41
PMS1-213ENST00000441310 TBC1D12O60347 775 aa17.6■□□□□ 0.41
PMS1-213ENST00000441310 VARSP26640 1264 aaKnown RBP17.6■□□□□ 0.41
PMS1-213ENST00000441310 HIRAP54198 1017 aaPredicted RBP17.6■□□□□ 0.41
PMS1-213ENST00000441310 HADHBP55084 474 aaKnown RBP17.6■□□□□ 0.41
PMS1-213ENST00000441310 ARL4CP56559 192 aa17.6■□□□□ 0.41
PMS1-213ENST00000441310 BTKQ06187 659 aa17.6■□□□□ 0.41
PMS1-213ENST00000441310 PDK3Q15120 406 aa17.6■□□□□ 0.41
PMS1-213ENST00000441310 RASA2Q15283 850 aa17.6■□□□□ 0.41
PMS1-213ENST00000441310 LRRC8BQ6P9F7 803 aa17.6■□□□□ 0.41
PMS1-213ENST00000441310 NET1Q7Z628 596 aaPredicted RBP17.6■□□□□ 0.41
PMS1-213ENST00000441310 ULK2Q8IYT8 1036 aa17.6■□□□□ 0.41
PMS1-213ENST00000441310 RDH13Q8NBN7 331 aa17.6■□□□□ 0.41
PMS1-213ENST00000441310 HACL1Q9UJ83 578 aa17.6■□□□□ 0.41
PMS1-213ENST00000441310 GTPBP10A4D1E9 387 aaKnown RBP17.59■□□□□ 0.41
PMS1-213ENST00000441310 FSCN2O14926 492 aa17.59■□□□□ 0.41
PMS1-213ENST00000441310 MYL2P10916 166 aa17.59■□□□□ 0.41
PMS1-213ENST00000441310 UQCRBP14927 111 aa17.59■□□□□ 0.41
PMS1-213ENST00000441310 VCLP18206 1134 aa17.59■□□□□ 0.41
PMS1-213ENST00000441310 PRELPP51888 382 aa17.59■□□□□ 0.41
PMS1-213ENST00000441310 TRMT5Q32P41 509 aaKnown RBP17.59■□□□□ 0.41
PMS1-213ENST00000441310 FKBP1CQ5VVH2 108 aa17.59■□□□□ 0.41
PMS1-213ENST00000441310 NCCRP1Q6ZVX7 275 aaPredicted RBP17.59■□□□□ 0.41
PMS1-213ENST00000441310 ARL10Q8N8L6 244 aa17.59■□□□□ 0.41
PMS1-213ENST00000441310 SLCO2A1Q92959 643 aa17.59■□□□□ 0.41
PMS1-213ENST00000441310 POLR3CQ9BUI4 534 aaPredicted RBP17.59■□□□□ 0.41
PMS1-213ENST00000441310 SLC17A7Q9P2U7 560 aa17.59■□□□□ 0.41
PMS1-213ENST00000441310 APEX2Q9UBZ4 518 aa17.59■□□□□ 0.41
PMS1-213ENST00000441310 CTDP1Q9Y5B0 961 aaPredicted RBP17.59■□□□□ 0.41
PMS1-213ENST00000441310 CD151P48509 253 aa17.59■□□□□ 0.41
PMS1-213ENST00000441310 ACTR3P61158 418 aa17.59■□□□□ 0.41
PMS1-213ENST00000441310 NCOA4Q13772 614 aa17.59■□□□□ 0.41
PMS1-213ENST00000441310 C1orf228Q6PIY5 440 aa17.59■□□□□ 0.41
PMS1-213ENST00000441310 SLC35B4Q969S0 331 aa17.59■□□□□ 0.41
PMS1-213ENST00000441310 ZBED3Q96IU2 234 aaPredicted RBP17.59■□□□□ 0.41
PMS1-213ENST00000441310 LXNQ9BS40 222 aa17.59■□□□□ 0.41
PMS1-213ENST00000441310 KCNK13Q9HB14 408 aa17.59■□□□□ 0.41
PMS1-213ENST00000441310 PCDH18Q9HCL0 1135 aa17.59■□□□□ 0.41
PMS1-213ENST00000441310 BARX2Q9UMQ3 279 aaPredicted RBP17.59■□□□□ 0.41
PMS1-213ENST00000441310 ATP6V1B1P15313 513 aa17.59■□□□□ 0.41
PMS1-213ENST00000441310 PTGER2P43116 358 aa17.59■□□□□ 0.41
PMS1-213ENST00000441310 MSLNQ13421 630 aaPredicted RBP17.59■□□□□ 0.41
PMS1-213ENST00000441310 DLK2Q6UY11 383 aa17.59■□□□□ 0.41
PMS1-213ENST00000441310 GSTA5Q7RTV2 222 aa17.59■□□□□ 0.41
PMS1-213ENST00000441310 TCP10LQ8TDR4 215 aa17.59■□□□□ 0.41
PMS1-213ENST00000441310 GAB3Q8WWW8 586 aa17.59■□□□□ 0.41
PMS1-213ENST00000441310 OXNAD1Q96HP4 312 aaPredicted RBP17.59■□□□□ 0.41
PMS1-213ENST00000441310 DCLK3Q9C098 648 aa17.59■□□□□ 0.41
PMS1-213ENST00000441310 KCNH7Q9NS40 1196 aa17.59■□□□□ 0.41
PMS1-213ENST00000441310 MAGEC1O60732 1142 aa17.58■□□□□ 0.41
PMS1-213ENST00000441310 YY1P25490 414 aa17.58■□□□□ 0.41
PMS1-213ENST00000441310 DCTN2Q13561 401 aaKnown RBP17.58■□□□□ 0.41
PMS1-213ENST00000441310 DNAJC14Q6Y2X3 702 aaPredicted RBP17.58■□□□□ 0.41
PMS1-213ENST00000441310 TREML1Q86YW5 311 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms