RNA–Protein interactions for RNA: ENST00000440400.1

ACTN4-204, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-204ENST00000440400 FSBPO95073 299 aa13.91□□□□□ -0.18
ACTN4-204ENST00000440400 PFKMP08237 780 aa13.91□□□□□ -0.18
ACTN4-204ENST00000440400 LRPAP1P30533 357 aa13.91□□□□□ -0.18
ACTN4-204ENST00000440400 GPD2P43304 727 aa13.91□□□□□ -0.18
ACTN4-204ENST00000440400 MRPS6P82932 125 aaKnown RBP13.91□□□□□ -0.18
ACTN4-204ENST00000440400 ZNF200P98182 395 aaPredicted RBP13.91□□□□□ -0.18
ACTN4-204ENST00000440400 ZNF211Q13398 564 aaPredicted RBP13.91□□□□□ -0.18
ACTN4-204ENST00000440400 PTPROQ16827 1216 aa13.91□□□□□ -0.18
ACTN4-204ENST00000440400 PTPN20Q4JDL3 420 aa13.91□□□□□ -0.18
ACTN4-204ENST00000440400 AADACL2Q6P093 401 aa13.91□□□□□ -0.18
ACTN4-204ENST00000440400 POLNQ7Z5Q5 900 aa13.91□□□□□ -0.18
ACTN4-204ENST00000440400 FAM228AQ86W67 206 aa13.91□□□□□ -0.18
ACTN4-204ENST00000440400 XYLT1Q86Y38 959 aa13.91□□□□□ -0.18
ACTN4-204ENST00000440400 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.91□□□□□ -0.18
ACTN4-204ENST00000440400 ARHGAP39Q9C0H5 1083 aa13.91□□□□□ -0.18
ACTN4-204ENST00000440400 SLC40A1Q9NP59 571 aa13.91□□□□□ -0.18
ACTN4-204ENST00000440400 CHST12Q9NRB3 414 aa13.91□□□□□ -0.18
ACTN4-204ENST00000440400 FAM114A2Q9NRY5 505 aa13.91□□□□□ -0.18
ACTN4-204ENST00000440400 ZDHHC18Q9NUE0 388 aa13.91□□□□□ -0.18
ACTN4-204ENST00000440400 UBQLN1Q9UMX0 589 aaKnown RBP13.91□□□□□ -0.18
ACTN4-204ENST00000440400 NEU2Q9Y3R4 380 aa13.91□□□□□ -0.18
ACTN4-204ENST00000440400 NME7Q9Y5B8 376 aa13.91□□□□□ -0.18
ACTN4-204ENST00000440400 ZSCAN5CA6NGD5 496 aaPredicted RBP13.91□□□□□ -0.18
ACTN4-204ENST00000440400 MICAL2O94851 1124 aa13.91□□□□□ -0.18
ACTN4-204ENST00000440400 FAM26DQ5JW98 314 aa13.91□□□□□ -0.18
ACTN4-204ENST00000440400 ARHGAP17Q68EM7 881 aa13.91□□□□□ -0.18
ACTN4-204ENST00000440400 LLGL2Q6P1M3 1020 aa13.91□□□□□ -0.18
ACTN4-204ENST00000440400 TTC27Q6P3X3 843 aa13.91□□□□□ -0.18
ACTN4-204ENST00000440400 KLHL7Q8IXQ5 586 aa13.91□□□□□ -0.18
ACTN4-204ENST00000440400 CCDC13Q8IYE1 715 aa13.91□□□□□ -0.18
ACTN4-204ENST00000440400 BEST2Q8NFU1 509 aa13.91□□□□□ -0.18
ACTN4-204ENST00000440400 PIK3R5Q8WYR1 880 aa13.91□□□□□ -0.18
ACTN4-204ENST00000440400 SPDL1Q96EA4 605 aa13.91□□□□□ -0.18
ACTN4-204ENST00000440400 TACO1Q9BSH4 297 aaKnown RBP13.91□□□□□ -0.18
ACTN4-204ENST00000440400 FAM49AQ9H0Q0 323 aaPredicted RBP13.91□□□□□ -0.18
ACTN4-204ENST00000440400 TRPV2Q9Y5S1 764 aa13.91□□□□□ -0.18
ACTN4-204ENST00000440400 PATJQ8NI35 1801 aa13.9□□□□□ -0.18
ACTN4-204ENST00000440400 GBP1P32455 592 aa13.9□□□□□ -0.18
ACTN4-204ENST00000440400 TAS2R40P59535 323 aa13.9□□□□□ -0.18
ACTN4-204ENST00000440400 COPS2P61201 443 aa13.9□□□□□ -0.18
ACTN4-204ENST00000440400 OGDHQ02218 1023 aa13.9□□□□□ -0.18
ACTN4-204ENST00000440400 PIGHQ14442 188 aaPredicted RBP13.9□□□□□ -0.18
ACTN4-204ENST00000440400 ACAP1Q15027 740 aa13.9□□□□□ -0.18
ACTN4-204ENST00000440400 SCARA5Q6ZMJ2 495 aa13.9□□□□□ -0.18
ACTN4-204ENST00000440400 PLVAPQ9BX97 442 aa13.9□□□□□ -0.18
ACTN4-204ENST00000440400 NXF3Q9H4D5 531 aaKnown RBP13.9□□□□□ -0.18
ACTN4-204ENST00000440400 TMEM110-MUSTN1A8MSY1 372 aa13.9□□□□□ -0.18
ACTN4-204ENST00000440400 RECQL4O94761 1208 aa13.9□□□□□ -0.18
ACTN4-204ENST00000440400 CD4P01730 458 aa13.9□□□□□ -0.18
ACTN4-204ENST00000440400 SETSIPP0DME0 302 aa13.9□□□□□ -0.18
ACTN4-204ENST00000440400 RARAP10276 462 aa13.9□□□□□ -0.18
ACTN4-204ENST00000440400 PSMC4P43686 418 aa13.9□□□□□ -0.18
ACTN4-204ENST00000440400 YARSP54577 528 aaKnown RBP13.9□□□□□ -0.18
ACTN4-204ENST00000440400 CDH8P55286 799 aa13.9□□□□□ -0.18
ACTN4-204ENST00000440400 MYO1EQ12965 1108 aa13.9□□□□□ -0.18
ACTN4-204ENST00000440400 SYDE1Q6ZW31 735 aaPredicted RBP13.9□□□□□ -0.18
ACTN4-204ENST00000440400 IQCKQ8N0W5 287 aa13.9□□□□□ -0.18
ACTN4-204ENST00000440400 C7orf31Q8N865 590 aa13.9□□□□□ -0.18
ACTN4-204ENST00000440400 ARMC2Q8NEN0 867 aa13.9□□□□□ -0.18
ACTN4-204ENST00000440400 ARL8AQ96BM9 186 aa13.9□□□□□ -0.18
ACTN4-204ENST00000440400 RAB17Q9H0T7 212 aa13.9□□□□□ -0.18
ACTN4-204ENST00000440400 CPSF2Q9P2I0 782 aaKnown RBP13.9□□□□□ -0.18
ACTN4-204ENST00000440400 AMACRQ9UHK6 382 aa13.9□□□□□ -0.18
ACTN4-204ENST00000440400 CEP350Q5VT06 3117 aa13.9□□□□□ -0.18
ACTN4-204ENST00000440400 TLR3O15455 904 aaKnown RBP13.89□□□□□ -0.19
ACTN4-204ENST00000440400 PNPLA4P41247 253 aa13.89□□□□□ -0.19
ACTN4-204ENST00000440400 DR1Q01658 176 aa13.89□□□□□ -0.19
ACTN4-204ENST00000440400 WLSQ5T9L3 541 aa13.89□□□□□ -0.19
ACTN4-204ENST00000440400 DRICH1Q6PGQ1 229 aaPredicted RBP13.89□□□□□ -0.19
ACTN4-204ENST00000440400 B4GALNT4Q76KP1 1039 aa13.89□□□□□ -0.19
ACTN4-204ENST00000440400 STK32AQ8WU08 396 aa13.89□□□□□ -0.19
ACTN4-204ENST00000440400 PPP1R10Q96QC0 940 aaKnown RBP13.89□□□□□ -0.19
ACTN4-204ENST00000440400 ERP44Q9BS26 406 aa13.89□□□□□ -0.19
ACTN4-204ENST00000440400 CYLDQ9NQC7 956 aa13.89□□□□□ -0.19
ACTN4-204ENST00000440400 NXF1Q9UBU9 619 aaKnown RBP13.89□□□□□ -0.19
ACTN4-204ENST00000440400 TUBGCP4Q9UGJ1 667 aa13.89□□□□□ -0.19
ACTN4-204ENST00000440400 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.89□□□□□ -0.19
ACTN4-204ENST00000440400 PODXLO00592 558 aa13.89□□□□□ -0.19
ACTN4-204ENST00000440400 TTI1O43156 1089 aa13.89□□□□□ -0.19
ACTN4-204ENST00000440400 KRT19P08727 400 aa13.89□□□□□ -0.19
ACTN4-204ENST00000440400 COILP38432 576 aaPredicted RBP13.89□□□□□ -0.19
ACTN4-204ENST00000440400 SEC24CP53992 1094 aa13.89□□□□□ -0.19
ACTN4-204ENST00000440400 RNASE9P60153 205 aaKnown RBP13.89□□□□□ -0.19
ACTN4-204ENST00000440400 CACNB2Q08289 660 aaPredicted RBP13.89□□□□□ -0.19
ACTN4-204ENST00000440400 GRIK3Q13003 919 aa13.89□□□□□ -0.19
ACTN4-204ENST00000440400 SND1Q7KZF4 910 aaKnown RBP eCLIP13.89□□□□□ -0.198e-20■□□□□ 9.3
ACTN4-204ENST00000440400 MRPL10Q7Z7H8 261 aaKnown RBP13.89□□□□□ -0.19
ACTN4-204ENST00000440400 ERICH1Q86X53 443 aa13.89□□□□□ -0.19
ACTN4-204ENST00000440400 TSEN2Q8NCE0 465 aaKnown RBP13.89□□□□□ -0.19
ACTN4-204ENST00000440400 TBC1D31Q96DN5 1066 aa13.89□□□□□ -0.19
ACTN4-204ENST00000440400 CCDC114Q96M63 670 aa13.89□□□□□ -0.19
ACTN4-204ENST00000440400 SPATS2LQ9NUQ6 558 aaKnown RBP13.89□□□□□ -0.19
ACTN4-204ENST00000440400 NFU1Q9UMS0 254 aa13.89□□□□□ -0.19
ACTN4-204ENST00000440400 EFR3BQ9Y2G0 817 aa13.89□□□□□ -0.19
ACTN4-204ENST00000440400 SMIM28A0A1B0GU29 152 aa13.89□□□□□ -0.19
ACTN4-204ENST00000440400 TCRBV7S2A1N4TA0A589 114 aa13.89□□□□□ -0.19
ACTN4-204ENST00000440400 C3orf70A6NLC5 250 aaPredicted RBP13.89□□□□□ -0.19
ACTN4-204ENST00000440400 ERBB2P04626 1255 aa13.89□□□□□ -0.19
ACTN4-204ENST00000440400 FAM153BP0C7A2 387 aa13.89□□□□□ -0.19
ACTN4-204ENST00000440400 SCNN1AP37088 669 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms