RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 TXNRD3NBQ6F5E7 133 aa15.89■□□□□ 0.13
CPSF7-205ENST00000439958 AGMOQ6ZNB7 445 aa15.89■□□□□ 0.13
CPSF7-205ENST00000439958 MAATS1Q7Z4T9 603 aa15.89■□□□□ 0.13
CPSF7-205ENST00000439958 PCDHA3Q9Y5H8 950 aa15.89■□□□□ 0.13
CPSF7-205ENST00000439958 PODXLO00592 558 aa15.89■□□□□ 0.13
CPSF7-205ENST00000439958 RRP9O43818 475 aaKnown RBP15.89■□□□□ 0.13
CPSF7-205ENST00000439958 RNF8O76064 485 aa15.89■□□□□ 0.13
CPSF7-205ENST00000439958 CKBP12277 381 aa15.89■□□□□ 0.13
CPSF7-205ENST00000439958 PDGFRAP16234 1089 aa15.89■□□□□ 0.13
CPSF7-205ENST00000439958 BRCC3P46736 316 aa15.89■□□□□ 0.13
CPSF7-205ENST00000439958 CCL23P55773 120 aa15.89■□□□□ 0.13
CPSF7-205ENST00000439958 HSP90B2PQ58FF3 399 aa15.89■□□□□ 0.13
CPSF7-205ENST00000439958 BEND6Q5SZJ8 279 aaPredicted RBP15.89■□□□□ 0.13
CPSF7-205ENST00000439958 PMF1Q6P1K2 205 aa15.89■□□□□ 0.13
CPSF7-205ENST00000439958 CCDC25Q86WR0 208 aa15.89■□□□□ 0.13
CPSF7-205ENST00000439958 LRRC52Q8N7C0 313 aa15.89■□□□□ 0.13
CPSF7-205ENST00000439958 SLAIN1Q8ND83 568 aa15.89■□□□□ 0.13
CPSF7-205ENST00000439958 SNX24Q9Y343 169 aa15.89■□□□□ 0.13
CPSF7-205ENST00000439958 MGAMO43451 1857 aa15.88■□□□□ 0.13
CPSF7-205ENST00000439958 F8W810 466 aa15.88■□□□□ 0.13
CPSF7-205ENST00000439958 CYP3A5P20815 502 aa15.88■□□□□ 0.13
CPSF7-205ENST00000439958 CTNNA1P35221 906 aaKnown RBP15.88■□□□□ 0.13
CPSF7-205ENST00000439958 MCCD1P59942 119 aaPredicted RBP15.88■□□□□ 0.13
CPSF7-205ENST00000439958 CNGA2Q16280 664 aa15.88■□□□□ 0.13
CPSF7-205ENST00000439958 C15orf59Q2T9L4 293 aaPredicted RBP15.88■□□□□ 0.13
CPSF7-205ENST00000439958 MDH1BQ5I0G3 518 aa15.88■□□□□ 0.13
CPSF7-205ENST00000439958 PLEKHA7Q6IQ23 1121 aa15.88■□□□□ 0.13
CPSF7-205ENST00000439958 ABI1Q8IZP0 508 aa15.88■□□□□ 0.13
CPSF7-205ENST00000439958 SENP8Q96LD8 212 aa15.88■□□□□ 0.13
CPSF7-205ENST00000439958 RUFY1Q96T51 708 aa15.88■□□□□ 0.13
CPSF7-205ENST00000439958 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.88■□□□□ 0.133e-8■■■□□ 15.8
CPSF7-205ENST00000439958 DDX43Q9NXZ2 648 aaKnown RBP15.88■□□□□ 0.13
CPSF7-205ENST00000439958 UPP2O95045 317 aa15.88■□□□□ 0.13
CPSF7-205ENST00000439958 CCDC137Q6PK04 289 aaKnown RBP15.88■□□□□ 0.13
CPSF7-205ENST00000439958 CCNI2Q6ZMN8 369 aaPredicted RBP15.88■□□□□ 0.13
CPSF7-205ENST00000439958 DEFB128Q7Z7B8 93 aa15.88■□□□□ 0.13
CPSF7-205ENST00000439958 SLC13A5Q86YT5 568 aaPredicted RBP15.88■□□□□ 0.13
CPSF7-205ENST00000439958 REM2Q8IYK8 340 aaPredicted RBP15.88■□□□□ 0.13
CPSF7-205ENST00000439958 SLC8A3P57103 927 aa15.88■□□□□ 0.13
CPSF7-205ENST00000439958 SH3PXD2AQ5TCZ1 1133 aa15.88■□□□□ 0.13
CPSF7-205ENST00000439958 TTC30AQ86WT1 665 aa15.88■□□□□ 0.13
CPSF7-205ENST00000439958 ZNF518BQ9C0D4 1074 aa15.88■□□□□ 0.13
CPSF7-205ENST00000439958 ASIC3Q9UHC3 531 aa15.88■□□□□ 0.13
CPSF7-205ENST00000439958 PNPLA4P41247 253 aa15.87■□□□□ 0.13
CPSF7-205ENST00000439958 GPD2P43304 727 aa15.87■□□□□ 0.13
CPSF7-205ENST00000439958 PEX5P50542 639 aa15.87■□□□□ 0.13
CPSF7-205ENST00000439958 PTP4A2Q12974 167 aa15.87■□□□□ 0.13
CPSF7-205ENST00000439958 ZBTB6Q15916 424 aa15.87■□□□□ 0.13
CPSF7-205ENST00000439958 FAM183BPQ6ZVS7 135 aa15.87■□□□□ 0.13
CPSF7-205ENST00000439958 CEP57Q86XR8 500 aa15.87■□□□□ 0.13
CPSF7-205ENST00000439958 KRT222Q8N1A0 295 aa15.87■□□□□ 0.13
CPSF7-205ENST00000439958 C3orf20Q8ND61 904 aa15.87■□□□□ 0.13
CPSF7-205ENST00000439958 CASKIN2Q8WXE0 1202 aa15.87■□□□□ 0.13
CPSF7-205ENST00000439958 VCPIP1Q96JH7 1222 aa15.87■□□□□ 0.13
CPSF7-205ENST00000439958 PRDM10Q9NQV6 1147 aa15.87■□□□□ 0.13
CPSF7-205ENST00000439958 SLC38A7Q9NVC3 462 aa15.87■□□□□ 0.13
CPSF7-205ENST00000439958 RAB21Q9UL25 225 aa15.87■□□□□ 0.13
CPSF7-205ENST00000439958 DERAQ9Y315 318 aa15.87■□□□□ 0.13
CPSF7-205ENST00000439958 LAMA3Q16787 3333 aa15.87■□□□□ 0.13
CPSF7-205ENST00000439958 TMEM191CA6NGB0 347 aa15.87■□□□□ 0.13
CPSF7-205ENST00000439958 IGHA2P01877 340 aa15.87■□□□□ 0.13
CPSF7-205ENST00000439958 RARAP10276 462 aa15.87■□□□□ 0.13
CPSF7-205ENST00000439958 PLTPP55058 493 aa15.87■□□□□ 0.13
CPSF7-205ENST00000439958 GOLGA6L1Q8N7Z2 621 aa15.87■□□□□ 0.13
CPSF7-205ENST00000439958 CLEC4CQ8WTT0 213 aa15.87■□□□□ 0.13
CPSF7-205ENST00000439958 SCLYQ96I15 445 aa15.87■□□□□ 0.13
CPSF7-205ENST00000439958 CFAP57Q96MR6 1250 aa15.87■□□□□ 0.13
CPSF7-205ENST00000439958 PCDHGC3Q9UN70 934 aa15.87■□□□□ 0.13
CPSF7-205ENST00000439958 NME7Q9Y5B8 376 aa15.87■□□□□ 0.13
CPSF7-205ENST00000439958 CCDC188H7C350 402 aa15.86■□□□□ 0.13
CPSF7-205ENST00000439958 MAP3K6O95382 1288 aa15.86■□□□□ 0.13
CPSF7-205ENST00000439958 IFNB1P01574 187 aa15.86■□□□□ 0.13
CPSF7-205ENST00000439958 OR1G1P47890 313 aa15.86■□□□□ 0.13
CPSF7-205ENST00000439958 GPS2Q13227 327 aa15.86■□□□□ 0.13
CPSF7-205ENST00000439958 ALKAL1Q6UXT8 129 aa15.86■□□□□ 0.13
CPSF7-205ENST00000439958 B4GALNT4Q76KP1 1039 aa15.86■□□□□ 0.13
CPSF7-205ENST00000439958 FAM193BQ96PV7 902 aaPredicted RBP15.86■□□□□ 0.13
CPSF7-205ENST00000439958 DNAJC17Q9NVM6 304 aaKnown RBP15.86■□□□□ 0.13
CPSF7-205ENST00000439958 SIP14410 1827 aa15.86■□□□□ 0.13
CPSF7-205ENST00000439958 ZNF236Q9UL36 1845 aa15.86■□□□□ 0.13
CPSF7-205ENST00000439958 TARSL2A2RTX5 802 aaKnown RBP15.86■□□□□ 0.13
CPSF7-205ENST00000439958 PIRO00625 290 aa15.86■□□□□ 0.13
CPSF7-205ENST00000439958 CABYRO75952 493 aa15.86■□□□□ 0.13
CPSF7-205ENST00000439958 FAM153BP0C7A2 387 aa15.86■□□□□ 0.13
CPSF7-205ENST00000439958 SLC1A1P43005 524 aa15.86■□□□□ 0.13
CPSF7-205ENST00000439958 ARPP19P56211 112 aa15.86■□□□□ 0.13
CPSF7-205ENST00000439958 PTK7Q13308 1070 aa15.86■□□□□ 0.13
CPSF7-205ENST00000439958 FAM153CQ494X1 144 aa15.86■□□□□ 0.13
CPSF7-205ENST00000439958 PPP6R3Q5H9R7 873 aaPredicted RBP15.86■□□□□ 0.13
CPSF7-205ENST00000439958 FAM117BQ6P1L5 589 aa15.86■□□□□ 0.13
CPSF7-205ENST00000439958 GLB1LQ6UWU2 654 aa15.86■□□□□ 0.13
CPSF7-205ENST00000439958 XYLT1Q86Y38 959 aa15.86■□□□□ 0.13
CPSF7-205ENST00000439958 C3orf58Q8NDZ4 430 aa15.86■□□□□ 0.13
CPSF7-205ENST00000439958 RIN2Q8WYP3 895 aaPredicted RBP15.86■□□□□ 0.13
CPSF7-205ENST00000439958 TNIP3Q96KP6 325 aa15.86■□□□□ 0.13
CPSF7-205ENST00000439958 FUT8Q9BYC5 575 aa15.86■□□□□ 0.13
CPSF7-205ENST00000439958 GPATCH2LQ9NWQ4 482 aa15.86■□□□□ 0.13
CPSF7-205ENST00000439958 SAE1Q9UBE0 346 aaPredicted RBP15.86■□□□□ 0.13
CPSF7-205ENST00000439958 FAM153AQ9UHL3 310 aa15.86■□□□□ 0.13
CPSF7-205ENST00000439958 KCNE1P15382 129 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms