RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 CEP63Q96MT8 703 aa11.17□□□□□ -0.62
MCF2L-216ENST00000439475 ASB16Q96NS5 453 aa11.17□□□□□ -0.62
MCF2L-216ENST00000439475 PKMYT1Q99640 499 aa11.17□□□□□ -0.62
MCF2L-216ENST00000439475 RPP25Q9BUL9 199 aaKnown RBP11.17□□□□□ -0.62
MCF2L-216ENST00000439475 TRMT61BQ9BVS5 477 aaKnown RBP11.17□□□□□ -0.62
MCF2L-216ENST00000439475 IRF2BPLQ9H1B7 796 aa11.17□□□□□ -0.62
MCF2L-216ENST00000439475 SMOC2Q9H3U7 446 aa11.17□□□□□ -0.62
MCF2L-216ENST00000439475 TASP1Q9H6P5 420 aa11.17□□□□□ -0.62
MCF2L-216ENST00000439475 CYP3A43Q9HB55 503 aa11.17□□□□□ -0.62
MCF2L-216ENST00000439475 ATP2C2O75185 946 aa11.16□□□□□ -0.62
MCF2L-216ENST00000439475 MOSPD3O75425 235 aa11.16□□□□□ -0.62
MCF2L-216ENST00000439475 VNN1O95497 513 aa11.16□□□□□ -0.62
MCF2L-216ENST00000439475 GNA14O95837 355 aa11.16□□□□□ -0.62
MCF2L-216ENST00000439475 ASS1P00966 412 aaKnown RBP11.16□□□□□ -0.62
MCF2L-216ENST00000439475 TRIM49P0CI25 452 aa11.16□□□□□ -0.62
MCF2L-216ENST00000439475 TRIM49CP0CI26 452 aa11.16□□□□□ -0.62
MCF2L-216ENST00000439475 PSMC3P17980 439 aa11.16□□□□□ -0.62
MCF2L-216ENST00000439475 BDNFP23560 247 aa11.16□□□□□ -0.62
MCF2L-216ENST00000439475 MXI1P50539 228 aa11.16□□□□□ -0.62
MCF2L-216ENST00000439475 CDR1P51861 262 aa11.16□□□□□ -0.62
MCF2L-216ENST00000439475 CDH8P55286 799 aa11.16□□□□□ -0.62
MCF2L-216ENST00000439475 PSMC1P62191 440 aaKnown RBP11.16□□□□□ -0.62
MCF2L-216ENST00000439475 CETN1Q12798 172 aa11.16□□□□□ -0.62
MCF2L-216ENST00000439475 DDR2Q16832 855 aa11.16□□□□□ -0.62
MCF2L-216ENST00000439475 MDH1BQ5I0G3 518 aa11.16□□□□□ -0.62
MCF2L-216ENST00000439475 WDR44Q5JSH3 913 aa11.16□□□□□ -0.62
MCF2L-216ENST00000439475 FAM78AQ5JUQ0 283 aa11.16□□□□□ -0.62
MCF2L-216ENST00000439475 KLHL10Q6JEL2 608 aa11.16□□□□□ -0.62
MCF2L-216ENST00000439475 FOXR2Q6PJQ5 311 aa11.16□□□□□ -0.62
MCF2L-216ENST00000439475 UNC93AQ86WB7 457 aa11.16□□□□□ -0.62
MCF2L-216ENST00000439475 SIX5Q8N196 739 aa11.16□□□□□ -0.62
MCF2L-216ENST00000439475 TTC39CQ8N584 583 aa11.16□□□□□ -0.62
MCF2L-216ENST00000439475 B3GALNT2Q8NCR0 500 aa11.16□□□□□ -0.62
MCF2L-216ENST00000439475 GPR152Q8TDT2 470 aa11.16□□□□□ -0.62
MCF2L-216ENST00000439475 IRF7Q92985 503 aa11.16□□□□□ -0.62
MCF2L-216ENST00000439475 PCED1BQ96HM7 432 aa11.16□□□□□ -0.62
MCF2L-216ENST00000439475 GBP4Q96PP9 640 aa11.16□□□□□ -0.62
MCF2L-216ENST00000439475 KXD1Q9BQD3 176 aa11.16□□□□□ -0.62
MCF2L-216ENST00000439475 MED10Q9BTT4 135 aa11.16□□□□□ -0.62
MCF2L-216ENST00000439475 ELOVL4Q9GZR5 314 aa11.16□□□□□ -0.62
MCF2L-216ENST00000439475 BRD9Q9H8M2 597 aa11.16□□□□□ -0.62
MCF2L-216ENST00000439475 TRPV4Q9HBA0 871 aa11.16□□□□□ -0.62
MCF2L-216ENST00000439475 CRTAC1Q9NQ79 661 aa11.16□□□□□ -0.62
MCF2L-216ENST00000439475 ARMCX3Q9UH62 379 aaPredicted RBP11.16□□□□□ -0.62
MCF2L-216ENST00000439475 CA14Q9ULX7 337 aa11.16□□□□□ -0.62
MCF2L-216ENST00000439475 XIRP2A4UGR9 3374 aa11.16□□□□□ -0.62
MCF2L-216ENST00000439475 SLC38A8A6NNN8 435 aa11.15□□□□□ -0.62
MCF2L-216ENST00000439475 GOLGA6L22H0YM25 854 aa11.15□□□□□ -0.62
MCF2L-216ENST00000439475 BIN1O00499 593 aa11.15□□□□□ -0.62
MCF2L-216ENST00000439475 ZNF263O14978 683 aa11.15□□□□□ -0.62
MCF2L-216ENST00000439475 HCRTO43612 131 aa11.15□□□□□ -0.62
MCF2L-216ENST00000439475 NOL4O94818 638 aa11.15□□□□□ -0.62
MCF2L-216ENST00000439475 WEE1P30291 646 aa11.15□□□□□ -0.62
MCF2L-216ENST00000439475 PPP3CCP48454 512 aa11.15□□□□□ -0.62
MCF2L-216ENST00000439475 MCCD1P59942 119 aaPredicted RBP11.15□□□□□ -0.62
MCF2L-216ENST00000439475 NOP14P78316 857 aaKnown RBP11.15□□□□□ -0.62
MCF2L-216ENST00000439475 PRKCQQ04759 706 aa11.15□□□□□ -0.62
MCF2L-216ENST00000439475 PPP3CAQ08209 521 aa11.15□□□□□ -0.62
MCF2L-216ENST00000439475 MORC3Q14149 939 aa11.15□□□□□ -0.62
MCF2L-216ENST00000439475 CCDC40Q4G0X9 1142 aa11.15□□□□□ -0.62
MCF2L-216ENST00000439475 SLC44A4Q53GD3 710 aa11.15□□□□□ -0.62
MCF2L-216ENST00000439475 DCAF17Q5H9S7 520 aaPredicted RBP11.15□□□□□ -0.62
MCF2L-216ENST00000439475 C1orf220Q5T0J3 134 aa11.15□□□□□ -0.62
MCF2L-216ENST00000439475 ASTLQ6HA08 431 aaPredicted RBP11.15□□□□□ -0.62
MCF2L-216ENST00000439475 PHLDB3Q6NSJ2 640 aa11.15□□□□□ -0.62
MCF2L-216ENST00000439475 SCARA5Q6ZMJ2 495 aa11.15□□□□□ -0.62
MCF2L-216ENST00000439475 DENND5BQ6ZUT9 1274 aa11.15□□□□□ -0.62
MCF2L-216ENST00000439475 GAREM2Q75VX8 874 aa11.15□□□□□ -0.62
MCF2L-216ENST00000439475 FRMD5Q7Z6J6 570 aa11.15□□□□□ -0.62
MCF2L-216ENST00000439475 ARID3BQ8IVW6 561 aaPredicted RBP11.15□□□□□ -0.62
MCF2L-216ENST00000439475 MFSD6LQ8IWD5 586 aa11.15□□□□□ -0.62
MCF2L-216ENST00000439475 FBXL13Q8NEE6 735 aa11.15□□□□□ -0.62
MCF2L-216ENST00000439475 ST13P5Q8NFI4 369 aaPredicted RBP11.15□□□□□ -0.62
MCF2L-216ENST00000439475 TAS1R2Q8TE23 839 aa11.15□□□□□ -0.62
MCF2L-216ENST00000439475 NELFBQ8WX92 580 aa11.15□□□□□ -0.62
MCF2L-216ENST00000439475 EEF2KMTQ96G04 330 aa11.15□□□□□ -0.62
MCF2L-216ENST00000439475 TRMT2BQ96GJ1 504 aaKnown RBP11.15□□□□□ -0.62
MCF2L-216ENST00000439475 SPATA17Q96L03 361 aa11.15□□□□□ -0.62
MCF2L-216ENST00000439475 C8orf48Q96LL4 319 aa11.15□□□□□ -0.62
MCF2L-216ENST00000439475 ZSWIM3Q96MP5 696 aa11.15□□□□□ -0.62
MCF2L-216ENST00000439475 NELL2Q99435 816 aa11.15□□□□□ -0.62
MCF2L-216ENST00000439475 ZNF334Q9HCZ1 680 aaPredicted RBP11.15□□□□□ -0.62
MCF2L-216ENST00000439475 ARHGEF3Q9NR81 526 aa11.15□□□□□ -0.62
MCF2L-216ENST00000439475 THG1LQ9NWX6 298 aaKnown RBP11.15□□□□□ -0.62
MCF2L-216ENST00000439475 RAB20Q9NX57 234 aa11.15□□□□□ -0.62
MCF2L-216ENST00000439475 OBP2AQ9NY56 170 aa11.15□□□□□ -0.62
MCF2L-216ENST00000439475 KIAA1468Q9P260 1216 aa11.15□□□□□ -0.62
MCF2L-216ENST00000439475 TRIM49BA6NDI0 452 aa11.14□□□□□ -0.63
MCF2L-216ENST00000439475 HEPACAM2A8MVW5 462 aa11.14□□□□□ -0.63
MCF2L-216ENST00000439475 NCAM2O15394 837 aa11.14□□□□□ -0.63
MCF2L-216ENST00000439475 F11P03951 625 aa11.14□□□□□ -0.63
MCF2L-216ENST00000439475 HMGA1P17096 107 aaKnown RBP11.14□□□□□ -0.63
MCF2L-216ENST00000439475 GDI1P31150 447 aa11.14□□□□□ -0.63
MCF2L-216ENST00000439475 AVPR1AP37288 418 aa11.14□□□□□ -0.63
MCF2L-216ENST00000439475 GPR15P49685 360 aa11.14□□□□□ -0.63
MCF2L-216ENST00000439475 PDE6CP51160 858 aa11.14□□□□□ -0.63
MCF2L-216ENST00000439475 NLRP12P59046 1061 aa11.14□□□□□ -0.63
MCF2L-216ENST00000439475 PAK1Q13153 545 aa11.14□□□□□ -0.63
MCF2L-216ENST00000439475 CAMK4Q16566 473 aa11.14□□□□□ -0.63
MCF2L-216ENST00000439475 SDHAF4Q5VUM1 108 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms