RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 C12orf29Q8N999 325 aa13.45□□□□□ -0.26
SCLT1-202ENST00000439369 ANKRD52Q8NB46 1076 aa13.45□□□□□ -0.26
SCLT1-202ENST00000439369 TMEM35BQ8NCS4 154 aa13.45□□□□□ -0.26
SCLT1-202ENST00000439369 STK32AQ8WU08 396 aa13.45□□□□□ -0.26
SCLT1-202ENST00000439369 SLC20A1Q8WUM9 679 aa13.45□□□□□ -0.26
SCLT1-202ENST00000439369 SMARCD1Q96GM5 515 aa13.45□□□□□ -0.26
SCLT1-202ENST00000439369 PCED1BQ96HM7 432 aa13.45□□□□□ -0.26
SCLT1-202ENST00000439369 ZSWIM1Q9BR11 485 aa13.45□□□□□ -0.26
SCLT1-202ENST00000439369 B3GNT5Q9BYG0 378 aa13.45□□□□□ -0.26
SCLT1-202ENST00000439369 UBXN6Q9BZV1 441 aa13.45□□□□□ -0.26
SCLT1-202ENST00000439369 PDCL3Q9H2J4 239 aa13.45□□□□□ -0.26
SCLT1-202ENST00000439369 DEF6Q9H4E7 631 aa13.45□□□□□ -0.26
SCLT1-202ENST00000439369 NHEJ1Q9H9Q4 299 aaPredicted RBP13.45□□□□□ -0.26
SCLT1-202ENST00000439369 AFF4Q9UHB7 1163 aaKnown RBP13.45□□□□□ -0.26
SCLT1-202ENST00000439369 GTF3C4Q9UKN8 822 aa13.45□□□□□ -0.26
SCLT1-202ENST00000439369 MTUS1Q9ULD2 1270 aa13.45□□□□□ -0.26
SCLT1-202ENST00000439369 COLQQ9Y215 455 aaPredicted RBP13.45□□□□□ -0.26
SCLT1-202ENST00000439369 PCDHB5Q9Y5E4 795 aa13.45□□□□□ -0.26
SCLT1-202ENST00000439369 CDY1Q9Y6F8 540 aa13.45□□□□□ -0.26
SCLT1-202ENST00000439369 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.44□□□□□ -0.26
SCLT1-202ENST00000439369 C2CD2LO14523 706 aa13.44□□□□□ -0.26
SCLT1-202ENST00000439369 HCRTO43612 131 aa13.44□□□□□ -0.26
SCLT1-202ENST00000439369 MICAL2O94851 1124 aa13.44□□□□□ -0.26
SCLT1-202ENST00000439369 ABLIM3O94929 683 aa13.44□□□□□ -0.26
SCLT1-202ENST00000439369 CYP1A1P04798 512 aaPredicted RBP13.44□□□□□ -0.26
SCLT1-202ENST00000439369 ADH1AP07327 375 aa13.44□□□□□ -0.26
SCLT1-202ENST00000439369 MMEP08473 750 aa13.44□□□□□ -0.26
SCLT1-202ENST00000439369 FAM200BP0CF97 657 aa13.44□□□□□ -0.26
SCLT1-202ENST00000439369 DNAJB1P25685 340 aa13.44□□□□□ -0.26
SCLT1-202ENST00000439369 OR1D2P34982 312 aa13.44□□□□□ -0.26
SCLT1-202ENST00000439369 EIF4A3P38919 411 aaKnown RBP13.44□□□□□ -0.26
SCLT1-202ENST00000439369 SNX16P57768 344 aa13.44□□□□□ -0.26
SCLT1-202ENST00000439369 ERVFC1P60507 584 aa13.44□□□□□ -0.26
SCLT1-202ENST00000439369 ROR1Q01973 937 aa13.44□□□□□ -0.26
SCLT1-202ENST00000439369 BST2Q10589 180 aaKnown RBP13.44□□□□□ -0.26
SCLT1-202ENST00000439369 SLC18A3Q16572 532 aa13.44□□□□□ -0.26
SCLT1-202ENST00000439369 GOLGA7BQ2TAP0 167 aa13.44□□□□□ -0.26
SCLT1-202ENST00000439369 SLC39A12Q504Y0 691 aa13.44□□□□□ -0.26
SCLT1-202ENST00000439369 PKDCCQ504Y2 493 aa13.44□□□□□ -0.26
SCLT1-202ENST00000439369 C10orf76Q5T2E6 689 aa13.44□□□□□ -0.26
SCLT1-202ENST00000439369 PPP1R26Q5T8A7 1209 aaPredicted RBP13.44□□□□□ -0.26
SCLT1-202ENST00000439369 SPRED2Q7Z698 418 aa13.44□□□□□ -0.26
SCLT1-202ENST00000439369 FAM35AQ86V20 835 aa13.44□□□□□ -0.26
SCLT1-202ENST00000439369 LRRTM3Q86VH5 581 aa13.44□□□□□ -0.26
SCLT1-202ENST00000439369 SLC30A5Q8TAD4 765 aa13.44□□□□□ -0.26
SCLT1-202ENST00000439369 ZNF461Q8TAF7 563 aa13.44□□□□□ -0.26
SCLT1-202ENST00000439369 OLIG1Q8TAK6 271 aa13.44□□□□□ -0.26
SCLT1-202ENST00000439369 SLC2A14Q8TDB8 520 aa13.44□□□□□ -0.26
SCLT1-202ENST00000439369 ARNTL2Q8WYA1 636 aa13.44□□□□□ -0.26
SCLT1-202ENST00000439369 MYLPFQ96A32 169 aa13.44□□□□□ -0.26
SCLT1-202ENST00000439369 NOX5Q96PH1 765 aa13.44□□□□□ -0.26
SCLT1-202ENST00000439369 CHP1Q99653 195 aa13.44□□□□□ -0.26
SCLT1-202ENST00000439369 CSNK1G1Q9HCP0 422 aa13.44□□□□□ -0.26
SCLT1-202ENST00000439369 PNPLA8Q9NP80 782 aa13.44□□□□□ -0.26
SCLT1-202ENST00000439369 ACP6Q9NPH0 428 aa13.44□□□□□ -0.26
SCLT1-202ENST00000439369 LUC7LQ9NQ29 371 aaKnown RBP13.44□□□□□ -0.26
SCLT1-202ENST00000439369 CYLDQ9NQC7 956 aa13.44□□□□□ -0.26
SCLT1-202ENST00000439369 FAM49BQ9NUQ9 324 aa13.44□□□□□ -0.26
SCLT1-202ENST00000439369 TSPAN16Q9UKR8 245 aa13.44□□□□□ -0.26
SCLT1-202ENST00000439369 C2orf71A6NGG8 1288 aa13.43□□□□□ -0.26
SCLT1-202ENST00000439369 EIF3CLB5ME19 914 aaKnown RBP13.43□□□□□ -0.26
SCLT1-202ENST00000439369 TEX28O15482 410 aa13.43□□□□□ -0.26
SCLT1-202ENST00000439369 AKR1B10O60218 316 aa13.43□□□□□ -0.26
SCLT1-202ENST00000439369 IPO7O95373 1038 aaKnown RBP13.43□□□□□ -0.26
SCLT1-202ENST00000439369 LCA5LO95447 670 aa13.43□□□□□ -0.26
SCLT1-202ENST00000439369 CNPP09543 421 aaKnown RBP13.43□□□□□ -0.26
SCLT1-202ENST00000439369 CCDC130P13994 396 aa13.43□□□□□ -0.26
SCLT1-202ENST00000439369 ATF2P15336 505 aa13.43□□□□□ -0.26
SCLT1-202ENST00000439369 NPR3P17342 541 aa13.43□□□□□ -0.26
SCLT1-202ENST00000439369 KIF11P52732 1056 aa13.43□□□□□ -0.26
SCLT1-202ENST00000439369 CCZ1BP86790 482 aa13.43□□□□□ -0.26
SCLT1-202ENST00000439369 CCZ1P86791 482 aaPredicted RBP13.43□□□□□ -0.26
SCLT1-202ENST00000439369 CYP27A1Q02318 531 aa13.43□□□□□ -0.26
SCLT1-202ENST00000439369 CAMK1Q14012 370 aa13.43□□□□□ -0.26
SCLT1-202ENST00000439369 CLEC16AQ2KHT3 1053 aa13.43□□□□□ -0.26
SCLT1-202ENST00000439369 RSPO2Q6UXX9 243 aaPredicted RBP13.43□□□□□ -0.26
SCLT1-202ENST00000439369 PAQR9Q6ZVX9 377 aa13.43□□□□□ -0.26
SCLT1-202ENST00000439369 GLYCTKQ8IVS8 523 aa13.43□□□□□ -0.26
SCLT1-202ENST00000439369 MSANTD4Q8NCY6 345 aa13.43□□□□□ -0.26
SCLT1-202ENST00000439369 MRPL38Q96DV4 380 aaKnown RBP13.43□□□□□ -0.26
SCLT1-202ENST00000439369 KLHL5Q96PQ7 755 aa13.43□□□□□ -0.26
SCLT1-202ENST00000439369 TMEM209Q96SK2 561 aa13.43□□□□□ -0.26
SCLT1-202ENST00000439369 EIF3CQ99613 913 aaKnown RBP13.43□□□□□ -0.26
SCLT1-202ENST00000439369 MED10Q9BTT4 135 aa13.43□□□□□ -0.26
SCLT1-202ENST00000439369 DUSP16Q9BY84 665 aa13.43□□□□□ -0.26
SCLT1-202ENST00000439369 MIS12Q9H081 205 aa13.43□□□□□ -0.26
SCLT1-202ENST00000439369 ZNF576Q9H609 170 aa13.43□□□□□ -0.26
SCLT1-202ENST00000439369 DMAP1Q9NPF5 467 aaPredicted RBP13.43□□□□□ -0.26
SCLT1-202ENST00000439369 TMLHEQ9NVH6 421 aa13.43□□□□□ -0.26
SCLT1-202ENST00000439369 LMCD1Q9NZU5 365 aa13.43□□□□□ -0.26
SCLT1-202ENST00000439369 ADAMTS1Q9UHI8 967 aa13.43□□□□□ -0.26
SCLT1-202ENST00000439369 NENFQ9UMX5 172 aa13.43□□□□□ -0.26
SCLT1-202ENST00000439369 EPN1Q9Y6I3 576 aaPredicted RBP13.43□□□□□ -0.26
SCLT1-202ENST00000439369 TNRC18O15417 2968 aaPredicted RBP13.43□□□□□ -0.26
SCLT1-202ENST00000439369 A0A087X0T9 212 aa13.42□□□□□ -0.26
SCLT1-202ENST00000439369 WDR27A2RRH5 827 aa13.42□□□□□ -0.26
SCLT1-202ENST00000439369 MTMR11A4FU01 709 aa13.42□□□□□ -0.26
SCLT1-202ENST00000439369 M0QYV0 167 aa13.42□□□□□ -0.26
SCLT1-202ENST00000439369 DDX3XO00571 662 aaKnown RBP eCLIP13.42□□□□□ -0.262e-13■■□□□ 13
SCLT1-202ENST00000439369 XPO1O14980 1071 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms