RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 MFSD5Q6N075 450 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 PID1Q7Z2X4 250 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 MCUQ8NE86 351 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 BEST2Q8NFU1 509 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 TCP10LQ8TDR4 215 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 HDAC11Q96DB2 347 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 PCDHB18PQ96TA0 734 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 FAM49AQ9H0Q0 323 aaPredicted RBP6.98□□□□□ -1.29
CSDE1-205ENST00000438362 ZNF408Q9H9D4 720 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 IPO11Q9UI26 975 aaKnown RBP6.98□□□□□ -1.29
CSDE1-205ENST00000438362 COG5Q9UP83 839 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 COL1A1P02452 1464 aaPredicted RBP6.98□□□□□ -1.29
CSDE1-205ENST00000438362 A8MXQ7 604 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 C19orf81C9J6K1 198 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 PAEPP09466 180 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 SUPT20HL2P0C7V6 817 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 MYL6P60660 151 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 LRRC36Q1X8D7 754 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 CRY2Q49AN0 593 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 FAXCQ5TGI0 409 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 ATF7IP2Q5U623 682 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 RNF43Q68DV7 783 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 PTF1AQ7RTS3 328 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 RNF169Q8NCN4 708 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 ZNF75CPQ92670 426 aaPredicted RBP6.98□□□□□ -1.29
CSDE1-205ENST00000438362 TMEM109Q9BVC6 243 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 SIX2Q9NPC8 291 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 A1CFQ9NQ94 594 aaKnown RBP6.98□□□□□ -1.29
CSDE1-205ENST00000438362 PIM2Q9P1W9 311 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 TMEM59LQ9UK28 342 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 STARD13Q9Y3M8 1113 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 PCDHA2Q9Y5H9 948 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 PLIN4Q96Q06 1357 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 C5P01031 1676 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 IGKV6D-41A0A0C4DH26 115 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 IL18RAPO95256 599 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 CBX6O95503 412 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 CALCAP01258 141 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 ZSCAN5DPP0CG00 497 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 ITGB5P18084 799 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 EPHB2P29323 1055 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 DPP9Q86TI2 863 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 SLC26A11Q86WA9 606 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 C12orf56Q8IXR9 622 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 LRRC71Q8N4P6 559 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 DCLK2Q8N568 766 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 TRIML2Q8N7C3 387 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 CCNYL1Q8N7R7 359 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 UBA3Q8TBC4 463 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 PGBD4Q96DM1 585 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 TMEM120AQ9BXJ8 343 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 UPF3AQ9H1J1 476 aaKnown RBP6.98□□□□□ -1.29
CSDE1-205ENST00000438362 CCDC68Q9H2F9 335 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 PNMA3Q9UL41 463 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 GJB6O95452 261 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 ABHD2P08910 425 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 ADORA2BP29275 332 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 NCALDP61601 193 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 TTLL4Q14679 1199 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 KYAT1Q16773 422 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 C4orf22Q6V702 233 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 APLFQ8IW19 511 aaPredicted RBP6.98□□□□□ -1.29
CSDE1-205ENST00000438362 EMC1Q8N766 993 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 TMEM161BQ8NDZ6 487 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 AGR3Q8TD06 166 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 STK32AQ8WU08 396 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 TEKT4Q8WW24 435 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 INPP5DQ92835 1189 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 ATXN7L3BQ96GX2 97 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 CLMNQ96JQ2 1002 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 KREMEN1Q96MU8 473 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 PWWP2AQ96N64 755 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 KCNK16Q96T55 309 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 NT5C1AQ9BXI3 368 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 RNPEPL1Q9HAU8 725 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 STXBP5LQ9Y2K9 1186 aa6.98□□□□□ -1.29
CSDE1-205ENST00000438362 ATP8B3O60423 1300 aa6.97□□□□□ -1.29
CSDE1-205ENST00000438362 TCRBV7S2A1N4TA0A589 114 aa6.97□□□□□ -1.29
CSDE1-205ENST00000438362 HUS1O60921 280 aa6.97□□□□□ -1.29
CSDE1-205ENST00000438362 PYGBP11216 843 aa6.97□□□□□ -1.29
CSDE1-205ENST00000438362 BGNP21810 368 aa6.97□□□□□ -1.29
CSDE1-205ENST00000438362 ADRA1DP25100 572 aa6.97□□□□□ -1.29
CSDE1-205ENST00000438362 NLRP11P59045 1033 aaKnown RBP6.97□□□□□ -1.29
CSDE1-205ENST00000438362 FKBP1AP62942 108 aaKnown RBP6.97□□□□□ -1.29
CSDE1-205ENST00000438362 TMEM132DQ14C87 1099 aa6.97□□□□□ -1.29
CSDE1-205ENST00000438362 RASA2Q15283 850 aa6.97□□□□□ -1.29
CSDE1-205ENST00000438362 TRIP10Q15642 601 aa6.97□□□□□ -1.29
CSDE1-205ENST00000438362 EFHC2Q5JST6 749 aa6.97□□□□□ -1.29
CSDE1-205ENST00000438362 RARS2Q5T160 578 aaKnown RBP6.97□□□□□ -1.29
CSDE1-205ENST00000438362 TATDN1Q6P1N9 297 aa6.97□□□□□ -1.29
CSDE1-205ENST00000438362 TTC27Q6P3X3 843 aa6.97□□□□□ -1.29
CSDE1-205ENST00000438362 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.97□□□□□ -1.29
CSDE1-205ENST00000438362 CDR2LQ86X02 465 aaPredicted RBP6.97□□□□□ -1.29
CSDE1-205ENST00000438362 MIEF2Q96C03 454 aa6.97□□□□□ -1.29
CSDE1-205ENST00000438362 CMTM5Q96DZ9 223 aa6.97□□□□□ -1.29
CSDE1-205ENST00000438362 VPS39Q96JC1 886 aa6.97□□□□□ -1.29
CSDE1-205ENST00000438362 XAB2Q9HCS7 855 aaKnown RBP6.97□□□□□ -1.29
CSDE1-205ENST00000438362 PFDN4Q9NQP4 134 aa6.97□□□□□ -1.29
CSDE1-205ENST00000438362 SLC5A4Q9NY91 659 aa6.97□□□□□ -1.29
CSDE1-205ENST00000438362 USP20Q9Y2K6 914 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms