RNA–Protein interactions for RNA: ENST00000438317.5

ERGIC3-207, Transcript of ERGIC and golgi 3, humanhuman

TSL 3

Gene ERGIC3, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-207ENST00000438317 MIS12Q9H081 205 aa11.66□□□□□ -0.54
ERGIC3-207ENST00000438317 XYLT2Q9H1B5 865 aa11.66□□□□□ -0.54
ERGIC3-207ENST00000438317 CDT1Q9H211 546 aa11.66□□□□□ -0.54
ERGIC3-207ENST00000438317 VRTNQ9H8Y1 702 aa11.66□□□□□ -0.54
ERGIC3-207ENST00000438317 CNOT10Q9H9A5 744 aaKnown RBP11.66□□□□□ -0.54
ERGIC3-207ENST00000438317 XPNPEP3Q9NQH7 507 aa11.66□□□□□ -0.54
ERGIC3-207ENST00000438317 TMEM39AQ9NV64 488 aa11.66□□□□□ -0.54
ERGIC3-207ENST00000438317 DRG1Q9Y295 367 aaKnown RBP11.66□□□□□ -0.54
ERGIC3-207ENST00000438317 EFR3BQ9Y2G0 817 aa11.66□□□□□ -0.54
ERGIC3-207ENST00000438317 A0A1W2PQ45 241 aaPredicted RBP11.65□□□□□ -0.54
ERGIC3-207ENST00000438317 A0A1W2PQY0 241 aa11.65□□□□□ -0.54
ERGIC3-207ENST00000438317 TCRBV5S1A1TA0A578 114 aa11.65□□□□□ -0.54
ERGIC3-207ENST00000438317 TCRBV7S2A1N4TA0A589 114 aa11.65□□□□□ -0.54
ERGIC3-207ENST00000438317 SIGLEC16A6NMB1 481 aa11.65□□□□□ -0.54
ERGIC3-207ENST00000438317 LACTBL1A8MY62 500 aa11.65□□□□□ -0.54
ERGIC3-207ENST00000438317 TJP3O95049 919 aa11.65□□□□□ -0.54
ERGIC3-207ENST00000438317 PGK1P00558 417 aa11.65□□□□□ -0.54
ERGIC3-207ENST00000438317 CFHP08603 1231 aa11.65□□□□□ -0.54
ERGIC3-207ENST00000438317 PTPN7P35236 360 aa11.65□□□□□ -0.54
ERGIC3-207ENST00000438317 CLCN3P51790 818 aa11.65□□□□□ -0.54
ERGIC3-207ENST00000438317 PPP2R2AP63151 447 aa11.65□□□□□ -0.54
ERGIC3-207ENST00000438317 ADCY2Q08462 1091 aa11.65□□□□□ -0.54
ERGIC3-207ENST00000438317 ACAP1Q15027 740 aa11.65□□□□□ -0.54
ERGIC3-207ENST00000438317 PCBP1Q15365 356 aaKnown RBP eCLIP11.65□□□□□ -0.54
ERGIC3-207ENST00000438317 KRT71Q3SY84 523 aa11.65□□□□□ -0.54
ERGIC3-207ENST00000438317 EEF1DP3Q658K8 133 aa11.65□□□□□ -0.54
ERGIC3-207ENST00000438317 DNAJC24Q6P3W2 148 aa11.65□□□□□ -0.54
ERGIC3-207ENST00000438317 DRICH1Q6PGQ1 229 aaPredicted RBP11.65□□□□□ -0.54
ERGIC3-207ENST00000438317 B4GALNT4Q76KP1 1039 aa11.65□□□□□ -0.54
ERGIC3-207ENST00000438317 ANKRD33Q7Z3H0 272 aa11.65□□□□□ -0.54
ERGIC3-207ENST00000438317 ZNF410Q86VK4 478 aa11.65□□□□□ -0.54
ERGIC3-207ENST00000438317 PASD1Q8IV76 773 aa11.65□□□□□ -0.54
ERGIC3-207ENST00000438317 CCDC50Q8IVM0 306 aa11.65□□□□□ -0.54
ERGIC3-207ENST00000438317 CCDC89Q8N998 374 aa11.65□□□□□ -0.54
ERGIC3-207ENST00000438317 C3orf20Q8ND61 904 aa11.65□□□□□ -0.54
ERGIC3-207ENST00000438317 TRAPPC12Q8WVT3 735 aa11.65□□□□□ -0.54
ERGIC3-207ENST00000438317 C1orf54Q8WWF1 131 aa11.65□□□□□ -0.54
ERGIC3-207ENST00000438317 SNF8Q96H20 258 aa11.65□□□□□ -0.54
ERGIC3-207ENST00000438317 FAM84AQ96KN4 292 aa11.65□□□□□ -0.54
ERGIC3-207ENST00000438317 SCLT1Q96NL6 688 aa11.65□□□□□ -0.54
ERGIC3-207ENST00000438317 TOX2Q96NM4 488 aa11.65□□□□□ -0.54
ERGIC3-207ENST00000438317 FRMD8P1Q9BZ68 369 aaPredicted RBP11.65□□□□□ -0.54
ERGIC3-207ENST00000438317 ABHD16BQ9H3Z7 469 aa11.65□□□□□ -0.54
ERGIC3-207ENST00000438317 IFT122Q9HBG6 1241 aa11.65□□□□□ -0.54
ERGIC3-207ENST00000438317 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.65□□□□□ -0.54
ERGIC3-207ENST00000438317 TRIP11Q15643 1979 aa11.65□□□□□ -0.55
ERGIC3-207ENST00000438317 A0A087WZ62 844 aa11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 FAM170AA1A519 330 aa11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 H3BRB1 525 aa11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 EBAG9O00559 213 aa11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 TIMP1P01033 207 aa11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 WEE2P0C1S8 567 aa11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 RARBP10826 455 aa11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 VDRP11473 427 aa11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 HOXD8P13378 290 aaPredicted RBP11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 CD58P19256 250 aa11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 SSR1P43307 286 aaKnown RBP11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 ASPAP45381 313 aa11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 KCNJ1P48048 391 aa11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 GSCP56915 257 aaPredicted RBP11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 RBP5P82980 135 aa11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 KRT17Q04695 432 aa11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 KLF1Q13351 362 aaPredicted RBP11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 CCDC85BQ15834 202 aaPredicted RBP11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 CNGA2Q16280 664 aa11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 HADHQ16836 314 aaKnown RBP11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 TMEM240Q5SV17 173 aa11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 PPP1R15BQ5SWA1 713 aa11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 MTHFD1LQ6UB35 978 aa11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 POLNQ7Z5Q5 900 aa11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 RNF180Q86T96 592 aa11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 CPNE8Q86YQ8 564 aa11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 SH2D3CQ8N5H7 860 aa11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 BCAS4Q8TDM0 211 aa11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 FNIP1Q8TF40 1166 aa11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 AFG1LQ8WV93 481 aa11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 CENPTQ96BT3 561 aa11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 TLCD1Q96CP7 247 aa11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 NECAB3Q96P71 396 aaPredicted RBP11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 FDXACB1Q9BRP7 624 aaPredicted RBP11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 ADPGKQ9BRR6 497 aa11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 C16orf70Q9BSU1 422 aa11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 TRAIPQ9BWF2 469 aa11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 TRIM7Q9C029 511 aa11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 EPN3Q9H201 632 aa11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 CENPHQ9H3R5 247 aa11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 TUT1Q9H6E5 874 aaKnown RBP11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 PLEKHA5Q9HAU0 1116 aa11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 BCCIPQ9P287 314 aaKnown RBP eCLIP11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 ANAPC5Q9UJX4 755 aa11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 ITGA11Q9UKX5 1188 aa11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 AKT3Q9Y243 479 aa11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 DERAQ9Y315 318 aa11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 C2CD2Q9Y426 696 aa11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 XIRP2A4UGR9 3374 aa11.64□□□□□ -0.55
ERGIC3-207ENST00000438317 TCF20Q9UGU0 1960 aaKnown RBP11.63□□□□□ -0.55
ERGIC3-207ENST00000438317 A0A1B0GUA9 196 aa11.63□□□□□ -0.55
ERGIC3-207ENST00000438317 B4GALT5O43286 388 aa11.63□□□□□ -0.55
ERGIC3-207ENST00000438317 ADAMTS4O75173 837 aa11.63□□□□□ -0.55
ERGIC3-207ENST00000438317 AGTP01019 485 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms