RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 UGT2B28Q9BY64 529 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 TRIM49BA6NDI0 452 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 TRIM49D1C9J1S8 452 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 F8W810 466 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 PGK2P07205 417 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 POTEIP0CG38 1075 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 GRIK1P39086 918 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 TPI1P60174 286 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 CCZ1BP86790 482 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 CCZ1P86791 482 aaPredicted RBP11.97□□□□□ -0.49
PTCH1-209ENST00000437951 FBXO42Q6P3S6 717 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 TUBA3EQ6PEY2 450 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 KCTD17Q8N5Z5 321 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 PIK3C3Q8NEB9 887 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 BTBD10Q9BSF8 475 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 PFDN2Q9UHV9 154 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 FAM220BPB1ANY3 271 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 WWP2O00308 870 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 BMP3P12645 472 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 ARPC4P59998 168 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 PDK1Q15118 436 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 BICRALQ6AI39 1079 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 KYQ8NBH2 561 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 ATXN2LQ8WWM7 1075 aaKnown RBP11.97□□□□□ -0.49
PTCH1-209ENST00000437951 CAMKK2Q96RR4 588 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 C8orf4Q9NR00 106 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 DYRK4Q9NR20 520 aa11.97□□□□□ -0.49
PTCH1-209ENST00000437951 PDXKO00764 312 aa11.96□□□□□ -0.49
PTCH1-209ENST00000437951 TIMM44O43615 452 aa11.96□□□□□ -0.49
PTCH1-209ENST00000437951 GSTT1P30711 240 aa11.96□□□□□ -0.49
PTCH1-209ENST00000437951 MAPK6Q16659 721 aa11.96□□□□□ -0.49
PTCH1-209ENST00000437951 CCDC153Q494R4 210 aa11.96□□□□□ -0.49
PTCH1-209ENST00000437951 ATP13A5Q4VNC0 1218 aa11.96□□□□□ -0.49
PTCH1-209ENST00000437951 PID1Q7Z2X4 250 aa11.96□□□□□ -0.49
PTCH1-209ENST00000437951 CACTIN-AS1Q8N1I8 211 aa11.96□□□□□ -0.49
PTCH1-209ENST00000437951 GRPEL2Q8TAA5 225 aa11.96□□□□□ -0.49
PTCH1-209ENST00000437951 GDPD5Q8WTR4 605 aa11.96□□□□□ -0.49
PTCH1-209ENST00000437951 CAVIN3Q969G5 261 aa11.96□□□□□ -0.49
PTCH1-209ENST00000437951 DHX35Q9H5Z1 703 aaKnown RBP11.96□□□□□ -0.49
PTCH1-209ENST00000437951 ARMC7Q9H6L4 198 aa11.96□□□□□ -0.49
PTCH1-209ENST00000437951 BSDC1Q9NW68 430 aaPredicted RBP11.96□□□□□ -0.49
PTCH1-209ENST00000437951 CLCA2Q9UQC9 943 aa11.96□□□□□ -0.49
PTCH1-209ENST00000437951 E9PBE3 544 aa11.96□□□□□ -0.49
PTCH1-209ENST00000437951 PIK3CDO00329 1044 aa11.96□□□□□ -0.49
PTCH1-209ENST00000437951 RAP1GAPP47736 663 aa11.96□□□□□ -0.49
PTCH1-209ENST00000437951 EXOSC10Q01780 885 aaKnown RBP11.96□□□□□ -0.49
PTCH1-209ENST00000437951 PRKCQQ04759 706 aa11.96□□□□□ -0.49
PTCH1-209ENST00000437951 RASA2Q15283 850 aa11.96□□□□□ -0.49
PTCH1-209ENST00000437951 PTPN21Q16825 1174 aa11.96□□□□□ -0.49
PTCH1-209ENST00000437951 TMEM26Q6ZUK4 368 aa11.96□□□□□ -0.49
PTCH1-209ENST00000437951 LRRC6Q86X45 466 aa11.96□□□□□ -0.49
PTCH1-209ENST00000437951 AMER2Q8N7J2 671 aa11.96□□□□□ -0.49
PTCH1-209ENST00000437951 SNX31Q8N9S9 440 aa11.96□□□□□ -0.49
PTCH1-209ENST00000437951 WBP11Q9Y2W2 641 aaKnown RBP11.96□□□□□ -0.49
PTCH1-209ENST00000437951 FLT3P36888 993 aa11.96□□□□□ -0.49
PTCH1-209ENST00000437951 ATP12AP54707 1039 aa11.96□□□□□ -0.49
PTCH1-209ENST00000437951 RAB15P59190 212 aa11.96□□□□□ -0.49
PTCH1-209ENST00000437951 PLIN5Q00G26 463 aa11.96□□□□□ -0.49
PTCH1-209ENST00000437951 ZNF846Q147U1 533 aa11.96□□□□□ -0.49
PTCH1-209ENST00000437951 AKAP14Q86UN6 197 aa11.96□□□□□ -0.49
PTCH1-209ENST00000437951 MED15Q96RN5 788 aa11.96□□□□□ -0.49
PTCH1-209ENST00000437951 THUMPD3Q9BV44 507 aaKnown RBP11.96□□□□□ -0.49
PTCH1-209ENST00000437951 RRN3Q9NYV6 651 aa11.96□□□□□ -0.49
PTCH1-209ENST00000437951 PNMA3Q9UL41 463 aa11.96□□□□□ -0.49
PTCH1-209ENST00000437951 CORO1CQ9ULV4 474 aaPredicted RBP11.96□□□□□ -0.49
PTCH1-209ENST00000437951 HEATR9A2RTY3 570 aa11.96□□□□□ -0.5
PTCH1-209ENST00000437951 RAD51CO43502 376 aa11.96□□□□□ -0.5
PTCH1-209ENST00000437951 GAS2O43903 313 aaKnown RBP11.96□□□□□ -0.5
PTCH1-209ENST00000437951 VPS4BO75351 444 aa11.96□□□□□ -0.5
PTCH1-209ENST00000437951 SRGNP10124 158 aa11.96□□□□□ -0.5
PTCH1-209ENST00000437951 PDXDC2PQ6P474 469 aa11.96□□□□□ -0.5
PTCH1-209ENST00000437951 LRRC34Q8IZ02 419 aa11.96□□□□□ -0.5
PTCH1-209ENST00000437951 PHACTR1Q9C0D0 580 aa11.96□□□□□ -0.5
PTCH1-209ENST00000437951 NDUFB9Q9Y6M9 179 aa11.96□□□□□ -0.5
PTCH1-209ENST00000437951 TRIM43BA6NCK2 446 aa11.96□□□□□ -0.5
PTCH1-209ENST00000437951 SRRM3A6NNA2 597 aaPredicted RBP11.96□□□□□ -0.5
PTCH1-209ENST00000437951 GNB5O14775 395 aa11.96□□□□□ -0.5
PTCH1-209ENST00000437951 ANXA6P08133 673 aa11.96□□□□□ -0.5
PTCH1-209ENST00000437951 EIF4A1P60842 406 aaKnown RBP11.96□□□□□ -0.5
PTCH1-209ENST00000437951 POU4F1Q01851 419 aa11.96□□□□□ -0.5
PTCH1-209ENST00000437951 RC3H1Q5TC82 1133 aaKnown RBP11.96□□□□□ -0.5
PTCH1-209ENST00000437951 SIX5Q8N196 739 aa11.96□□□□□ -0.5
PTCH1-209ENST00000437951 CCDC185Q8N715 623 aa11.96□□□□□ -0.5
PTCH1-209ENST00000437951 KCTD14Q9BQ13 255 aaPredicted RBP11.96□□□□□ -0.5
PTCH1-209ENST00000437951 RBM12Q9NTZ6 932 aaKnown RBP11.96□□□□□ -0.5
PTCH1-209ENST00000437951 KCND2Q9NZV8 630 aa11.96□□□□□ -0.5
PTCH1-209ENST00000437951 LEMD3Q9Y2U8 911 aa11.96□□□□□ -0.5
PTCH1-209ENST00000437951 RALAP11233 206 aa11.96□□□□□ -0.5
PTCH1-209ENST00000437951 FBXO31Q5XUX0 539 aaPredicted RBP11.96□□□□□ -0.5
PTCH1-209ENST00000437951 SLC22A9Q8IVM8 553 aa11.96□□□□□ -0.5
PTCH1-209ENST00000437951 CDC40O60508 579 aaKnown RBP eCLIP11.95□□□□□ -0.5
PTCH1-209ENST00000437951 MYL4P12829 197 aa11.95□□□□□ -0.5
PTCH1-209ENST00000437951 PSMB9P28065 219 aa11.95□□□□□ -0.5
PTCH1-209ENST00000437951 IFNGR2P38484 337 aa11.95□□□□□ -0.5
PTCH1-209ENST00000437951 PEX3P56589 373 aa11.95□□□□□ -0.5
PTCH1-209ENST00000437951 DLG4P78352 724 aa11.95□□□□□ -0.5
PTCH1-209ENST00000437951 OLR1P78380 273 aa11.95□□□□□ -0.5
PTCH1-209ENST00000437951 QPRTQ15274 297 aa11.95□□□□□ -0.5
PTCH1-209ENST00000437951 UNC45BQ8IWX7 931 aa11.95□□□□□ -0.5
PTCH1-209ENST00000437951 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms