RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 ATP2A3Q93084 1043 aa15.18■□□□□ 0.02
LINC01088-201ENST00000437737 CNOT6LQ96LI5 555 aaKnown RBP15.18■□□□□ 0.02
LINC01088-201ENST00000437737 TSPAN18Q96SJ8 248 aa15.18■□□□□ 0.02
LINC01088-201ENST00000437737 TRPC7Q9HCX4 862 aa15.18■□□□□ 0.02
LINC01088-201ENST00000437737 EVLQ9UI08 416 aaPredicted RBP15.18■□□□□ 0.02
LINC01088-201ENST00000437737 WNT6Q9Y6F9 365 aa15.18■□□□□ 0.02
LINC01088-201ENST00000437737 TNRC6BQ9UPQ9 1833 aaKnown RBP15.17■□□□□ 0.02
LINC01088-201ENST00000437737 PTPRDP23468 1912 aa15.17■□□□□ 0.02
LINC01088-201ENST00000437737 ADAMTS20P59510 1910 aa15.17■□□□□ 0.02
LINC01088-201ENST00000437737 SPAARA0A1B0GVQ0 90 aa15.17■□□□□ 0.02
LINC01088-201ENST00000437737 PP2D1A8MPX8 630 aa15.17■□□□□ 0.02
LINC01088-201ENST00000437737 F13A1P00488 732 aa15.17■□□□□ 0.02
LINC01088-201ENST00000437737 HMGA1P17096 107 aaKnown RBP15.17■□□□□ 0.02
LINC01088-201ENST00000437737 GUCY2CP25092 1073 aa15.17■□□□□ 0.02
LINC01088-201ENST00000437737 SIM1P81133 766 aaPredicted RBP15.17■□□□□ 0.02
LINC01088-201ENST00000437737 FAM160A1Q05DH4 1040 aa15.17■□□□□ 0.02
LINC01088-201ENST00000437737 NR1H3Q13133 447 aa15.17■□□□□ 0.02
LINC01088-201ENST00000437737 NBR1Q14596 966 aa15.17■□□□□ 0.02
LINC01088-201ENST00000437737 ZRSR1Q15695 479 aaKnown RBP15.17■□□□□ 0.02
LINC01088-201ENST00000437737 C2orf27AQ580R0 203 aa15.17■□□□□ 0.02
LINC01088-201ENST00000437737 JADE1Q6IE81 842 aa15.17■□□□□ 0.02
LINC01088-201ENST00000437737 ARMCX6Q7L4S7 300 aa15.17■□□□□ 0.02
LINC01088-201ENST00000437737 BRAPQ7Z569 592 aa15.17■□□□□ 0.02
LINC01088-201ENST00000437737 RASSF3Q86WH2 238 aa15.17■□□□□ 0.02
LINC01088-201ENST00000437737 DCP1BQ8IZD4 617 aaKnown RBP15.17■□□□□ 0.02
LINC01088-201ENST00000437737 IGSF22Q8N9C0 903 aa15.17■□□□□ 0.02
LINC01088-201ENST00000437737 STKLD1Q8NE28 680 aa15.17■□□□□ 0.02
LINC01088-201ENST00000437737 GBP4Q96PP9 640 aa15.17■□□□□ 0.02
LINC01088-201ENST00000437737 PYM1Q9BRP8 204 aaKnown RBP15.17■□□□□ 0.02
LINC01088-201ENST00000437737 NOL7Q9UMY1 257 aaKnown RBP15.17■□□□□ 0.02
LINC01088-201ENST00000437737 ADAMTS9Q9P2N4 1935 aa15.17■□□□□ 0.02
LINC01088-201ENST00000437737 PI4KAP42356 2102 aa15.16■□□□□ 0.02
LINC01088-201ENST00000437737 H0YCG3 227 aa15.16■□□□□ 0.02
LINC01088-201ENST00000437737 TAF4O00268 1085 aa15.16■□□□□ 0.02
LINC01088-201ENST00000437737 PIRO00625 290 aa15.16■□□□□ 0.02
LINC01088-201ENST00000437737 CYB561D2O14569 222 aa15.16■□□□□ 0.02
LINC01088-201ENST00000437737 HNRNPDLO14979 420 aaKnown RBP15.16■□□□□ 0.02
LINC01088-201ENST00000437737 MAP3K13O43283 966 aa15.16■□□□□ 0.02
LINC01088-201ENST00000437737 CKMP06732 381 aa15.16■□□□□ 0.02
LINC01088-201ENST00000437737 NFICP08651 508 aa15.16■□□□□ 0.02
LINC01088-201ENST00000437737 CSH1P0DML2 217 aa15.16■□□□□ 0.02
LINC01088-201ENST00000437737 CSH2P0DML3 217 aa15.16■□□□□ 0.02
LINC01088-201ENST00000437737 ENGP17813 658 aa15.16■□□□□ 0.02
LINC01088-201ENST00000437737 RDXP35241 583 aaKnown RBP15.16■□□□□ 0.02
LINC01088-201ENST00000437737 GPR15P49685 360 aa15.16■□□□□ 0.02
LINC01088-201ENST00000437737 TMEM132DQ14C87 1099 aa15.16■□□□□ 0.02
LINC01088-201ENST00000437737 ATL3Q6DD88 541 aa15.16■□□□□ 0.02
LINC01088-201ENST00000437737 MCTP1Q6DN14 999 aa15.16■□□□□ 0.02
LINC01088-201ENST00000437737 LPCAT2Q7L5N7 544 aa15.16■□□□□ 0.02
LINC01088-201ENST00000437737 KCNK18Q7Z418 384 aa15.16■□□□□ 0.02
LINC01088-201ENST00000437737 LRRTM3Q86VH5 581 aa15.16■□□□□ 0.02
LINC01088-201ENST00000437737 CD302Q8IX05 232 aa15.16■□□□□ 0.02
LINC01088-201ENST00000437737 C4orf32Q8N8J7 132 aa15.16■□□□□ 0.02
LINC01088-201ENST00000437737 MDGA1Q8NFP4 955 aa15.16■□□□□ 0.02
LINC01088-201ENST00000437737 USP33Q8TEY7 942 aa15.16■□□□□ 0.02
LINC01088-201ENST00000437737 FOXP1Q9H334 677 aaPredicted RBP15.16■□□□□ 0.02
LINC01088-201ENST00000437737 ZDHHC9Q9Y397 364 aa15.16■□□□□ 0.02
LINC01088-201ENST00000437737 PCDHB5Q9Y5E4 795 aa15.16■□□□□ 0.02
LINC01088-201ENST00000437737 PCNX2A6NKB5 2137 aa15.16■□□□□ 0.02
LINC01088-201ENST00000437737 HELZP42694 1942 aaKnown RBP15.15■□□□□ 0.02
LINC01088-201ENST00000437737 WDFY3Q8IZQ1 3526 aa15.15■□□□□ 0.02
LINC01088-201ENST00000437737 TRAV19A0A0A6YYK7 116 aa15.15■□□□□ 0.02
LINC01088-201ENST00000437737 OGTO15294 1046 aa15.15■□□□□ 0.02
LINC01088-201ENST00000437737 PRPF40AO75400 957 aaKnown RBP15.15■□□□□ 0.02
LINC01088-201ENST00000437737 ALDH1A2O94788 518 aa15.15■□□□□ 0.02
LINC01088-201ENST00000437737 USP17L7P0C7H9 530 aa15.15■□□□□ 0.02
LINC01088-201ENST00000437737 CDC25AP30304 524 aa15.15■□□□□ 0.02
LINC01088-201ENST00000437737 TRAPPC10P48553 1259 aa15.15■□□□□ 0.02
LINC01088-201ENST00000437737 TAF6P49848 677 aa15.15■□□□□ 0.02
LINC01088-201ENST00000437737 ATXN3P54252 364 aaPredicted RBP15.15■□□□□ 0.02
LINC01088-201ENST00000437737 PKP1Q13835 747 aa15.15■□□□□ 0.02
LINC01088-201ENST00000437737 ZNF77Q15935 545 aa15.15■□□□□ 0.02
LINC01088-201ENST00000437737 EML3Q32P44 896 aa15.15■□□□□ 0.02
LINC01088-201ENST00000437737 SDHAF4Q5VUM1 108 aa15.15■□□□□ 0.02
LINC01088-201ENST00000437737 WSCD1Q658N2 575 aa15.15■□□□□ 0.02
LINC01088-201ENST00000437737 CLEC17AQ6ZS10 378 aa15.15■□□□□ 0.02
LINC01088-201ENST00000437737 CCDC33Q8N5R6 958 aa15.15■□□□□ 0.02
LINC01088-201ENST00000437737 SPACA7Q96KW9 195 aa15.15■□□□□ 0.02
LINC01088-201ENST00000437737 PI4K2AQ9BTU6 479 aa15.15■□□□□ 0.02
LINC01088-201ENST00000437737 MSTO1Q9BUK6 570 aa15.15■□□□□ 0.02
LINC01088-201ENST00000437737 UXTQ9UBK9 157 aaPredicted RBP15.15■□□□□ 0.02
LINC01088-201ENST00000437737 MMP17Q9ULZ9 603 aa15.15■□□□□ 0.02
LINC01088-201ENST00000437737 ATXN2Q99700 1313 aaKnown RBP15.15■□□□□ 0.02
LINC01088-201ENST00000437737 CEP192Q8TEP8 1941 aa15.14■□□□□ 0.01
LINC01088-201ENST00000437737 ANAPC1Q9H1A4 1944 aa15.14■□□□□ 0.01
LINC01088-201ENST00000437737 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.14■□□□□ 0.01
LINC01088-201ENST00000437737 H0Y626 953 aa15.14■□□□□ 0.01
LINC01088-201ENST00000437737 TNFRSF10BO14763 440 aa15.14■□□□□ 0.01
LINC01088-201ENST00000437737 TRIM16O95361 564 aa15.14■□□□□ 0.01
LINC01088-201ENST00000437737 NCKAP1LP55160 1127 aa15.14■□□□□ 0.01
LINC01088-201ENST00000437737 TSPY1Q01534 308 aa15.14■□□□□ 0.01
LINC01088-201ENST00000437737 USP4Q13107 963 aa15.14■□□□□ 0.01
LINC01088-201ENST00000437737 CRY1Q16526 586 aa15.14■□□□□ 0.01
LINC01088-201ENST00000437737 LMBRD2Q68DH5 695 aaPredicted RBP15.14■□□□□ 0.01
LINC01088-201ENST00000437737 SYT12Q8IV01 421 aa15.14■□□□□ 0.01
LINC01088-201ENST00000437737 EFCAB13Q8IY85 973 aa15.14■□□□□ 0.01
LINC01088-201ENST00000437737 TMEFF1Q8IYR6 380 aa15.14■□□□□ 0.01
LINC01088-201ENST00000437737 HDDC3Q8N4P3 179 aa15.14■□□□□ 0.01
LINC01088-201ENST00000437737 RLN3Q8WXF3 142 aa15.14■□□□□ 0.01
LINC01088-201ENST00000437737 CYP2S1Q96SQ9 504 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms