RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 TRAPPC11Q7Z392 1133 aa11.63□□□□□ -0.55
SCN4A-201ENST00000435607 STRBPQ96SI9 672 aaKnown RBP11.63□□□□□ -0.55
SCN4A-201ENST00000435607 LZTS1Q9Y250 596 aa11.63□□□□□ -0.55
SCN4A-201ENST00000435607 NUDT14O95848 222 aa11.63□□□□□ -0.55
SCN4A-201ENST00000435607 ITGAXP20702 1163 aa11.63□□□□□ -0.55
SCN4A-201ENST00000435607 SSTR3P32745 418 aaPredicted RBP11.63□□□□□ -0.55
SCN4A-201ENST00000435607 PTPN7P35236 360 aa11.63□□□□□ -0.55
SCN4A-201ENST00000435607 HNMTP50135 292 aa11.63□□□□□ -0.55
SCN4A-201ENST00000435607 PPP2R2AP63151 447 aa11.63□□□□□ -0.55
SCN4A-201ENST00000435607 KRR1Q13601 381 aaKnown RBP11.63□□□□□ -0.55
SCN4A-201ENST00000435607 ZNF655Q8N720 491 aaPredicted RBP11.63□□□□□ -0.55
SCN4A-201ENST00000435607 RPRD1AQ96P16 312 aaPredicted RBP11.63□□□□□ -0.55
SCN4A-201ENST00000435607 MTA3Q9BTC8 594 aa11.63□□□□□ -0.55
SCN4A-201ENST00000435607 GGA3Q9NZ52 723 aa11.63□□□□□ -0.55
SCN4A-201ENST00000435607 AAR2Q9Y312 384 aaKnown RBP11.63□□□□□ -0.55
SCN4A-201ENST00000435607 CFAP73A6NFT4 308 aa11.63□□□□□ -0.55
SCN4A-201ENST00000435607 POLRMTO00411 1230 aaKnown RBP11.63□□□□□ -0.55
SCN4A-201ENST00000435607 KRT33AO76009 404 aa11.63□□□□□ -0.55
SCN4A-201ENST00000435607 AMHP03971 560 aa11.63□□□□□ -0.55
SCN4A-201ENST00000435607 GEMP55040 296 aa11.63□□□□□ -0.55
SCN4A-201ENST00000435607 MAGOHP61326 146 aaKnown RBP11.63□□□□□ -0.55
SCN4A-201ENST00000435607 ZNF200P98182 395 aaPredicted RBP11.63□□□□□ -0.55
SCN4A-201ENST00000435607 BAATQ14032 418 aaPredicted RBP11.63□□□□□ -0.55
SCN4A-201ENST00000435607 NCAPHQ15003 741 aa11.63□□□□□ -0.55
SCN4A-201ENST00000435607 SYCP2LQ5T4T6 812 aa11.63□□□□□ -0.55
SCN4A-201ENST00000435607 ZNF746Q6NUN9 644 aaPredicted RBP11.63□□□□□ -0.55
SCN4A-201ENST00000435607 CD302Q8IX05 232 aa11.63□□□□□ -0.55
SCN4A-201ENST00000435607 CCDC134Q9H6E4 229 aa11.63□□□□□ -0.55
SCN4A-201ENST00000435607 MTRF1O75570 445 aaKnown RBP11.63□□□□□ -0.55
SCN4A-201ENST00000435607 MYBL2P10244 700 aa11.63□□□□□ -0.55
SCN4A-201ENST00000435607 ITGALP20701 1170 aa11.63□□□□□ -0.55
SCN4A-201ENST00000435607 KLRC2P26717 231 aa11.63□□□□□ -0.55
SCN4A-201ENST00000435607 C11orf74Q86VG3 221 aa11.63□□□□□ -0.55
SCN4A-201ENST00000435607 ZNF557Q8N988 423 aaPredicted RBP11.63□□□□□ -0.55
SCN4A-201ENST00000435607 TFB1MQ8WVM0 346 aaKnown RBP11.63□□□□□ -0.55
SCN4A-201ENST00000435607 CASP10Q92851 521 aa11.63□□□□□ -0.55
SCN4A-201ENST00000435607 EME1Q96AY2 570 aa11.63□□□□□ -0.55
SCN4A-201ENST00000435607 ZNF304Q9HCX3 659 aa11.63□□□□□ -0.55
SCN4A-201ENST00000435607 CRYL1Q9Y2S2 319 aa11.63□□□□□ -0.55
SCN4A-201ENST00000435607 GPR1P46091 355 aa11.63□□□□□ -0.55
SCN4A-201ENST00000435607 CASP8Q14790 479 aa11.63□□□□□ -0.55
SCN4A-201ENST00000435607 INAQ16352 499 aa11.63□□□□□ -0.55
SCN4A-201ENST00000435607 TXNRD1Q16881 649 aa11.63□□□□□ -0.55
SCN4A-201ENST00000435607 PAN2Q504Q3 1202 aaKnown RBP11.63□□□□□ -0.55
SCN4A-201ENST00000435607 TMEM143Q96AN5 459 aa11.63□□□□□ -0.55
SCN4A-201ENST00000435607 SH3GL1Q99961 368 aa11.63□□□□□ -0.55
SCN4A-201ENST00000435607 REXO4Q9GZR2 422 aaKnown RBP11.63□□□□□ -0.55
SCN4A-201ENST00000435607 ZCWPW1Q9H0M4 648 aa11.63□□□□□ -0.55
SCN4A-201ENST00000435607 PIH1D3Q9NQM4 214 aaKnown RBP11.63□□□□□ -0.55
SCN4A-201ENST00000435607 FAM196BA6NMK8 535 aa11.62□□□□□ -0.55
SCN4A-201ENST00000435607 NFIBO00712 420 aa11.62□□□□□ -0.55
SCN4A-201ENST00000435607 HOXC6P09630 235 aa11.62□□□□□ -0.55
SCN4A-201ENST00000435607 CYP19A1P11511 503 aaPredicted RBP11.62□□□□□ -0.55
SCN4A-201ENST00000435607 PGM1P36871 562 aa11.62□□□□□ -0.55
SCN4A-201ENST00000435607 TALDO1P37837 337 aa11.62□□□□□ -0.55
SCN4A-201ENST00000435607 SMAD1Q15797 465 aaKnown RBP11.62□□□□□ -0.55
SCN4A-201ENST00000435607 FAM45AQ8TCE6 357 aa11.62□□□□□ -0.55
SCN4A-201ENST00000435607 HPDLQ96IR7 371 aa11.62□□□□□ -0.55
SCN4A-201ENST00000435607 WNK4Q96J92 1243 aa11.62□□□□□ -0.55
SCN4A-201ENST00000435607 OLFM1Q99784 485 aa11.62□□□□□ -0.55
SCN4A-201ENST00000435607 OSBPL5Q9H0X9 879 aaPredicted RBP11.62□□□□□ -0.55
SCN4A-201ENST00000435607 NEO1Q92859 1461 aa11.62□□□□□ -0.55
SCN4A-201ENST00000435607 ANO9A1A5B4 782 aa11.62□□□□□ -0.55
SCN4A-201ENST00000435607 TRIM13O60858 407 aa11.62□□□□□ -0.55
SCN4A-201ENST00000435607 OR6A2O95222 327 aa11.62□□□□□ -0.55
SCN4A-201ENST00000435607 NPTXRO95502 500 aa11.62□□□□□ -0.55
SCN4A-201ENST00000435607 CRTAMO95727 393 aa11.62□□□□□ -0.55
SCN4A-201ENST00000435607 ECDO95905 644 aaPredicted RBP11.62□□□□□ -0.55
SCN4A-201ENST00000435607 CAPN1P07384 714 aa11.62□□□□□ -0.55
SCN4A-201ENST00000435607 PBLDP30039 288 aaPredicted RBP11.62□□□□□ -0.55
SCN4A-201ENST00000435607 EMC2Q15006 297 aa11.62□□□□□ -0.55
SCN4A-201ENST00000435607 CYP51A1Q16850 503 aa11.62□□□□□ -0.55
SCN4A-201ENST00000435607 GOLGA7BQ2TAP0 167 aa11.62□□□□□ -0.55
SCN4A-201ENST00000435607 SCAIQ8N9R8 606 aa11.62□□□□□ -0.55
SCN4A-201ENST00000435607 ANTXR1Q9H6X2 564 aa11.62□□□□□ -0.55
SCN4A-201ENST00000435607 SMIM31A0A1B0GVY4 71 aa11.62□□□□□ -0.55
SCN4A-201ENST00000435607 STRNO43815 780 aa11.62□□□□□ -0.55
SCN4A-201ENST00000435607 DTNBO60941 627 aa11.62□□□□□ -0.55
SCN4A-201ENST00000435607 NOS3P29474 1203 aa11.62□□□□□ -0.55
SCN4A-201ENST00000435607 GUF1Q8N442 669 aaKnown RBP11.62□□□□□ -0.55
SCN4A-201ENST00000435607 TAF1DQ9H5J8 278 aaPredicted RBP11.62□□□□□ -0.55
SCN4A-201ENST00000435607 UBQLN1Q9UMX0 589 aaKnown RBP11.62□□□□□ -0.55
SCN4A-201ENST00000435607 WDR19Q8NEZ3 1342 aa11.62□□□□□ -0.55
SCN4A-201ENST00000435607 B3GAT3O94766 335 aa11.62□□□□□ -0.55
SCN4A-201ENST00000435607 GPD1P21695 349 aa11.62□□□□□ -0.55
SCN4A-201ENST00000435607 GFPT1Q06210 699 aaPredicted RBP11.62□□□□□ -0.55
SCN4A-201ENST00000435607 FRMD8Q9BZ67 464 aaPredicted RBP11.62□□□□□ -0.55
SCN4A-201ENST00000435607 KLHL31Q9H511 634 aa11.62□□□□□ -0.55
SCN4A-201ENST00000435607 KIAA0556O60303 1618 aa11.62□□□□□ -0.55
SCN4A-201ENST00000435607 KIF21AQ7Z4S6 1674 aa11.62□□□□□ -0.55
SCN4A-201ENST00000435607 WWP2O00308 870 aa11.62□□□□□ -0.55
SCN4A-201ENST00000435607 PTGER2P43116 358 aa11.62□□□□□ -0.55
SCN4A-201ENST00000435607 KBTBD12Q3ZCT8 623 aa11.62□□□□□ -0.55
SCN4A-201ENST00000435607 BHMTQ93088 406 aa11.62□□□□□ -0.55
SCN4A-201ENST00000435607 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.62□□□□□ -0.55
SCN4A-201ENST00000435607 PDXKO00764 312 aa11.62□□□□□ -0.55
SCN4A-201ENST00000435607 OPLAHO14841 1288 aa11.62□□□□□ -0.55
SCN4A-201ENST00000435607 ALDH2P05091 517 aa11.62□□□□□ -0.55
SCN4A-201ENST00000435607 PCNAP12004 261 aa11.62□□□□□ -0.55
SCN4A-201ENST00000435607 S100GP29377 79 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms