RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 PRRT2Q7Z6L0 340 aaPredicted RBP16.9■□□□□ 0.3
HLA-DQB2-231ENST00000435145 CPXM1Q96SM3 734 aa16.9■□□□□ 0.3
HLA-DQB2-231ENST00000435145 NFKBIZQ9BYH8 718 aa16.9■□□□□ 0.3
HLA-DQB2-231ENST00000435145 TRABDQ9H4I3 376 aa16.9■□□□□ 0.3
HLA-DQB2-231ENST00000435145 RXFP1Q9HBX9 757 aa16.9■□□□□ 0.3
HLA-DQB2-231ENST00000435145 ZMYND8Q9ULU4 1186 aaPredicted RBP16.9■□□□□ 0.3
HLA-DQB2-231ENST00000435145 SMG5Q9UPR3 1016 aaKnown RBP16.9■□□□□ 0.3
HLA-DQB2-231ENST00000435145 OTOFQ9HC10 1997 aa16.9■□□□□ 0.3
HLA-DQB2-231ENST00000435145 E7ESA3 106 aa16.89■□□□□ 0.29
HLA-DQB2-231ENST00000435145 CD19P15391 556 aa16.89■□□□□ 0.29
HLA-DQB2-231ENST00000435145 RAP1GAPP47736 663 aa16.89■□□□□ 0.29
HLA-DQB2-231ENST00000435145 GABRB2P47870 512 aa16.89■□□□□ 0.29
HLA-DQB2-231ENST00000435145 GPX6P59796 221 aa16.89■□□□□ 0.29
HLA-DQB2-231ENST00000435145 PSMC1P62191 440 aaKnown RBP16.89■□□□□ 0.29
HLA-DQB2-231ENST00000435145 ZKSCAN8Q15776 578 aaPredicted RBP16.89■□□□□ 0.29
HLA-DQB2-231ENST00000435145 PKN2Q16513 984 aaKnown RBP16.89■□□□□ 0.29
HLA-DQB2-231ENST00000435145 HADHQ16836 314 aaKnown RBP16.89■□□□□ 0.29
HLA-DQB2-231ENST00000435145 ZNF667Q5HYK9 610 aa16.89■□□□□ 0.29
HLA-DQB2-231ENST00000435145 PPIL6Q8IXY8 311 aa16.89■□□□□ 0.29
HLA-DQB2-231ENST00000435145 TMEM192Q8IY95 271 aa16.89■□□□□ 0.29
HLA-DQB2-231ENST00000435145 ZBED8Q8IZ13 594 aa16.89■□□□□ 0.29
HLA-DQB2-231ENST00000435145 GPC2Q8N158 579 aa16.89■□□□□ 0.29
HLA-DQB2-231ENST00000435145 NAT8LQ8N9F0 302 aa16.89■□□□□ 0.29
HLA-DQB2-231ENST00000435145 C1orf127Q8N9H9 656 aa16.89■□□□□ 0.29
HLA-DQB2-231ENST00000435145 SLC4A11Q8NBS3 891 aa16.89■□□□□ 0.29
HLA-DQB2-231ENST00000435145 CMASQ8NFW8 434 aaPredicted RBP16.89■□□□□ 0.29
HLA-DQB2-231ENST00000435145 CPT1BQ92523 772 aa16.89■□□□□ 0.29
HLA-DQB2-231ENST00000435145 MCRS1Q96EZ8 462 aa16.89■□□□□ 0.29
HLA-DQB2-231ENST00000435145 MINDY3Q9H8M7 445 aa16.89■□□□□ 0.29
HLA-DQB2-231ENST00000435145 VRTNQ9H8Y1 702 aa16.89■□□□□ 0.29
HLA-DQB2-231ENST00000435145 NXF1Q9UBU9 619 aaKnown RBP16.89■□□□□ 0.29
HLA-DQB2-231ENST00000435145 CLUHO75153 1309 aa16.89■□□□□ 0.29
HLA-DQB2-231ENST00000435145 NOP56O00567 594 aaKnown RBP16.89■□□□□ 0.29
HLA-DQB2-231ENST00000435145 CST8O60676 142 aa16.89■□□□□ 0.29
HLA-DQB2-231ENST00000435145 SLC25A27O95847 323 aa16.89■□□□□ 0.29
HLA-DQB2-231ENST00000435145 ERBB2P04626 1255 aa16.89■□□□□ 0.29
HLA-DQB2-231ENST00000435145 GJB1P08034 283 aa16.89■□□□□ 0.29
HLA-DQB2-231ENST00000435145 CXCL8P10145 99 aa16.89■□□□□ 0.29
HLA-DQB2-231ENST00000435145 MGAT5Q09328 741 aa16.89■□□□□ 0.29
HLA-DQB2-231ENST00000435145 CCDC15Q0P6D6 951 aa16.89■□□□□ 0.29
HLA-DQB2-231ENST00000435145 PDIA2Q13087 525 aaKnown RBP16.89■□□□□ 0.29
HLA-DQB2-231ENST00000435145 ACAP1Q15027 740 aa16.89■□□□□ 0.29
HLA-DQB2-231ENST00000435145 HIF1AQ16665 826 aa16.89■□□□□ 0.29
HLA-DQB2-231ENST00000435145 FITM2Q8N6M3 262 aa16.89■□□□□ 0.29
HLA-DQB2-231ENST00000435145 TRAPPC12Q8WVT3 735 aa16.89■□□□□ 0.29
HLA-DQB2-231ENST00000435145 MPHOSPH6Q99547 160 aaKnown RBP16.89■□□□□ 0.29
HLA-DQB2-231ENST00000435145 DHRS4Q9BTZ2 278 aa16.89■□□□□ 0.29
HLA-DQB2-231ENST00000435145 VPS37BQ9H9H4 285 aa16.89■□□□□ 0.29
HLA-DQB2-231ENST00000435145 RPF1Q9H9Y2 349 aaKnown RBP16.89■□□□□ 0.29
HLA-DQB2-231ENST00000435145 SSU72Q9NP77 194 aaKnown RBP16.89■□□□□ 0.29
HLA-DQB2-231ENST00000435145 PPP1R1BQ9UD71 204 aaPredicted RBP16.89■□□□□ 0.29
HLA-DQB2-231ENST00000435145 AGTPBP1Q9UPW5 1226 aa16.89■□□□□ 0.29
HLA-DQB2-231ENST00000435145 MGAMO43451 1857 aa16.88■□□□□ 0.29
HLA-DQB2-231ENST00000435145 INO80B-WBP1J3KQ70 363 aa16.88■□□□□ 0.29
HLA-DQB2-231ENST00000435145 TYROBPO43914 113 aa16.88■□□□□ 0.29
HLA-DQB2-231ENST00000435145 HBP1O60381 514 aa16.88■□□□□ 0.29
HLA-DQB2-231ENST00000435145 CILPO75339 1184 aa16.88■□□□□ 0.29
HLA-DQB2-231ENST00000435145 IFNB1P01574 187 aa16.88■□□□□ 0.29
HLA-DQB2-231ENST00000435145 NFICP08651 508 aa16.88■□□□□ 0.29
HLA-DQB2-231ENST00000435145 IQCF3P0C7M6 154 aa16.88■□□□□ 0.29
HLA-DQB2-231ENST00000435145 CTCFP49711 727 aaPredicted RBP16.88■□□□□ 0.29
HLA-DQB2-231ENST00000435145 GDF10P55107 478 aa16.88■□□□□ 0.29
HLA-DQB2-231ENST00000435145 OSTNP61366 133 aa16.88■□□□□ 0.29
HLA-DQB2-231ENST00000435145 PLCB3Q01970 1234 aa16.88■□□□□ 0.29
HLA-DQB2-231ENST00000435145 MYO1EQ12965 1108 aa16.88■□□□□ 0.29
HLA-DQB2-231ENST00000435145 FAM187BQ17R55 369 aa16.88■□□□□ 0.29
HLA-DQB2-231ENST00000435145 PREPLQ4J6C6 727 aaPredicted RBP16.88■□□□□ 0.29
HLA-DQB2-231ENST00000435145 ZC3H12AQ5D1E8 599 aaKnown RBP16.88■□□□□ 0.29
HLA-DQB2-231ENST00000435145 WLSQ5T9L3 541 aa16.88■□□□□ 0.29
HLA-DQB2-231ENST00000435145 GADL1Q6ZQY3 521 aa16.88■□□□□ 0.29
HLA-DQB2-231ENST00000435145 ANKLE1Q8NAG6 615 aa16.88■□□□□ 0.29
HLA-DQB2-231ENST00000435145 RMDN2Q96LZ7 410 aa16.88■□□□□ 0.29
HLA-DQB2-231ENST00000435145 NLRP4Q96MN2 994 aa16.88■□□□□ 0.29
HLA-DQB2-231ENST00000435145 SPATA33Q96N06 139 aa16.88■□□□□ 0.29
HLA-DQB2-231ENST00000435145 TWNKQ96RR1 684 aa16.88■□□□□ 0.29
HLA-DQB2-231ENST00000435145 INO80BQ9C086 356 aaPredicted RBP16.88■□□□□ 0.29
HLA-DQB2-231ENST00000435145 ELOVL4Q9GZR5 314 aa16.88■□□□□ 0.29
HLA-DQB2-231ENST00000435145 ASCC2Q9H1I8 757 aaPredicted RBP16.88■□□□□ 0.29
HLA-DQB2-231ENST00000435145 SMARCAD1Q9H4L7 1026 aa16.88■□□□□ 0.29
HLA-DQB2-231ENST00000435145 ZWILCHQ9H900 591 aa16.88■□□□□ 0.29
HLA-DQB2-231ENST00000435145 SAE1Q9UBE0 346 aaPredicted RBP16.88■□□□□ 0.29
HLA-DQB2-231ENST00000435145 RABGEF1Q9UJ41 708 aa16.88■□□□□ 0.29
HLA-DQB2-231ENST00000435145 STARD13Q9Y3M8 1113 aa16.88■□□□□ 0.29
HLA-DQB2-231ENST00000435145 POC1B-GALNT4F8VUJ3 575 aa16.87■□□□□ 0.29
HLA-DQB2-231ENST00000435145 GPR25O00155 361 aa16.87■□□□□ 0.29
HLA-DQB2-231ENST00000435145 SMAPO00193 183 aa16.87■□□□□ 0.29
HLA-DQB2-231ENST00000435145 ATP6V1G2O95670 118 aa16.87■□□□□ 0.29
HLA-DQB2-231ENST00000435145 RPL22P35268 128 aaKnown RBP16.87■□□□□ 0.29
HLA-DQB2-231ENST00000435145 CDH8P55286 799 aa16.87■□□□□ 0.29
HLA-DQB2-231ENST00000435145 IRX3P78415 501 aaPredicted RBP16.87■□□□□ 0.29
HLA-DQB2-231ENST00000435145 PTPN11Q06124 597 aaPredicted RBP16.87■□□□□ 0.29
HLA-DQB2-231ENST00000435145 POU5F1BQ06416 359 aa16.87■□□□□ 0.29
HLA-DQB2-231ENST00000435145 SPARCL1Q14515 664 aa16.87■□□□□ 0.29
HLA-DQB2-231ENST00000435145 SMTNL2Q2TAL5 461 aa16.87■□□□□ 0.29
HLA-DQB2-231ENST00000435145 HP1BP3Q5SSJ5 553 aaPredicted RBP16.87■□□□□ 0.29
HLA-DQB2-231ENST00000435145 ANKRD22Q5VYY1 191 aa16.87■□□□□ 0.29
HLA-DQB2-231ENST00000435145 WDR83Q9BRX9 315 aaKnown RBP16.87■□□□□ 0.29
HLA-DQB2-231ENST00000435145 SMYD3Q9H7B4 428 aa16.87■□□□□ 0.29
HLA-DQB2-231ENST00000435145 ECT2Q9H8V3 914 aa16.87■□□□□ 0.29
HLA-DQB2-231ENST00000435145 CYP3A43Q9HB55 503 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms