RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 ZNF560Q96MR9 790 aa12.48□□□□□ -0.41
CHRNA1-207ENST00000435083 FIZ1Q96SL8 496 aa12.48□□□□□ -0.41
CHRNA1-207ENST00000435083 IKZF4Q9H2S9 585 aa12.48□□□□□ -0.41
CHRNA1-207ENST00000435083 TRAV19A0A0A6YYK7 116 aa12.47□□□□□ -0.41
CHRNA1-207ENST00000435083 C1QTNF9BB2RNN3 333 aa12.47□□□□□ -0.41
CHRNA1-207ENST00000435083 H3BQV1 296 aa12.47□□□□□ -0.41
CHRNA1-207ENST00000435083 SLC26A4O43511 780 aa12.47□□□□□ -0.41
CHRNA1-207ENST00000435083 CKMP06732 381 aa12.47□□□□□ -0.41
CHRNA1-207ENST00000435083 C1QTNF9P0C862 333 aa12.47□□□□□ -0.41
CHRNA1-207ENST00000435083 PLCG1P19174 1290 aa12.47□□□□□ -0.41
CHRNA1-207ENST00000435083 ACAT1P24752 427 aaKnown RBP12.47□□□□□ -0.41
CHRNA1-207ENST00000435083 CYP2F1P24903 491 aa12.47□□□□□ -0.41
CHRNA1-207ENST00000435083 NR1H3Q13133 447 aa12.47□□□□□ -0.41
CHRNA1-207ENST00000435083 CRELD2Q6UXH1 353 aaPredicted RBP12.47□□□□□ -0.41
CHRNA1-207ENST00000435083 PDCL2Q8N4E4 241 aa12.47□□□□□ -0.41
CHRNA1-207ENST00000435083 TSTD1Q8NFU3 115 aa12.47□□□□□ -0.41
CHRNA1-207ENST00000435083 OSCP1Q8WVF1 389 aa12.47□□□□□ -0.41
CHRNA1-207ENST00000435083 POMGNT1Q8WZA1 660 aa12.47□□□□□ -0.41
CHRNA1-207ENST00000435083 RAD54LQ92698 747 aa12.47□□□□□ -0.41
CHRNA1-207ENST00000435083 ATP2A3Q93084 1043 aa12.47□□□□□ -0.41
CHRNA1-207ENST00000435083 SLC22A12Q96S37 553 aa12.47□□□□□ -0.41
CHRNA1-207ENST00000435083 TPSD1Q9BZJ3 242 aa12.47□□□□□ -0.41
CHRNA1-207ENST00000435083 TMEM206Q9H813 350 aa12.47□□□□□ -0.41
CHRNA1-207ENST00000435083 DDX43Q9NXZ2 648 aaKnown RBP12.47□□□□□ -0.41
CHRNA1-207ENST00000435083 EBF1Q9UH73 591 aa12.47□□□□□ -0.41
CHRNA1-207ENST00000435083 AGAP1Q9UPQ3 857 aa12.47□□□□□ -0.41
CHRNA1-207ENST00000435083 KHNYNO15037 678 aaKnown RBP12.47□□□□□ -0.41
CHRNA1-207ENST00000435083 HUS1O60921 280 aa12.47□□□□□ -0.41
CHRNA1-207ENST00000435083 TADA3O75528 432 aa12.47□□□□□ -0.41
CHRNA1-207ENST00000435083 NOL4O94818 638 aa12.47□□□□□ -0.41
CHRNA1-207ENST00000435083 IL18RAPO95256 599 aa12.47□□□□□ -0.41
CHRNA1-207ENST00000435083 POLR2BP30876 1174 aaKnown RBP12.47□□□□□ -0.41
CHRNA1-207ENST00000435083 PNPLA4P41247 253 aa12.47□□□□□ -0.41
CHRNA1-207ENST00000435083 TFAMQ00059 246 aaKnown RBP12.47□□□□□ -0.41
CHRNA1-207ENST00000435083 ZNF252P-AS1Q0IIN9 211 aa12.47□□□□□ -0.41
CHRNA1-207ENST00000435083 ZNF77Q15935 545 aa12.47□□□□□ -0.41
CHRNA1-207ENST00000435083 EML3Q32P44 896 aa12.47□□□□□ -0.41
CHRNA1-207ENST00000435083 USP39Q53GS9 565 aaKnown RBP12.47□□□□□ -0.41
CHRNA1-207ENST00000435083 UNQ6494/PRO21346Q6UXR6 183 aa12.47□□□□□ -0.41
CHRNA1-207ENST00000435083 SCN4BQ8IWT1 228 aa12.47□□□□□ -0.41
CHRNA1-207ENST00000435083 ARL14EPQ8N8R7 260 aaPredicted RBP12.47□□□□□ -0.41
CHRNA1-207ENST00000435083 ACBD6Q9BR61 282 aa12.47□□□□□ -0.41
CHRNA1-207ENST00000435083 GTF3C4Q9UKN8 822 aa12.47□□□□□ -0.41
CHRNA1-207ENST00000435083 L1RE1Q9UN81 338 aa12.47□□□□□ -0.41
CHRNA1-207ENST00000435083 STYXL1Q9Y6J8 313 aa12.47□□□□□ -0.41
CHRNA1-207ENST00000435083 MYO16Q9Y6X6 1858 aa12.46□□□□□ -0.41
CHRNA1-207ENST00000435083 KIAA1549LQ6ZVL6 1849 aa12.46□□□□□ -0.41
CHRNA1-207ENST00000435083 LNP1A1A4G5 178 aa12.46□□□□□ -0.42
CHRNA1-207ENST00000435083 ITGB3P05106 788 aa12.46□□□□□ -0.42
CHRNA1-207ENST00000435083 SPINK2P20155 84 aa12.46□□□□□ -0.42
CHRNA1-207ENST00000435083 SEC13P55735 322 aa12.46□□□□□ -0.42
CHRNA1-207ENST00000435083 MYL7Q01449 175 aa12.46□□□□□ -0.42
CHRNA1-207ENST00000435083 POU5F1Q01860 360 aaKnown RBP12.46□□□□□ -0.42
CHRNA1-207ENST00000435083 USP4Q13107 963 aa12.46□□□□□ -0.42
CHRNA1-207ENST00000435083 POSTNQ15063 836 aa12.46□□□□□ -0.42
CHRNA1-207ENST00000435083 C2orf27AQ580R0 203 aa12.46□□□□□ -0.42
CHRNA1-207ENST00000435083 INTS6LQ5JSJ4 861 aaKnown RBP12.46□□□□□ -0.42
CHRNA1-207ENST00000435083 SH3PXD2AQ5TCZ1 1133 aa12.46□□□□□ -0.42
CHRNA1-207ENST00000435083 TTC30AQ86WT1 665 aa12.46□□□□□ -0.42
CHRNA1-207ENST00000435083 NT5DC4Q86YG4 428 aa12.46□□□□□ -0.42
CHRNA1-207ENST00000435083 SPATA2LQ8IUW3 424 aaPredicted RBP12.46□□□□□ -0.42
CHRNA1-207ENST00000435083 KRI1Q8N9T8 703 aaKnown RBP12.46□□□□□ -0.42
CHRNA1-207ENST00000435083 SH3RF2Q8TEC5 729 aa12.46□□□□□ -0.42
CHRNA1-207ENST00000435083 LEO1Q8WVC0 666 aaPredicted RBP12.46□□□□□ -0.42
CHRNA1-207ENST00000435083 LARP4BQ92615 738 aaKnown RBP12.46□□□□□ -0.42
CHRNA1-207ENST00000435083 TRMT2BQ96GJ1 504 aaKnown RBP12.46□□□□□ -0.42
CHRNA1-207ENST00000435083 MYRFLQ96LU7 910 aa12.46□□□□□ -0.42
CHRNA1-207ENST00000435083 KIF2CQ99661 725 aa12.46□□□□□ -0.42
CHRNA1-207ENST00000435083 FAM213AQ9BRX8 229 aa12.46□□□□□ -0.42
CHRNA1-207ENST00000435083 LINC00597Q9H2U6 94 aa12.46□□□□□ -0.42
CHRNA1-207ENST00000435083 ABCB6Q9NP58 842 aa12.46□□□□□ -0.42
CHRNA1-207ENST00000435083 THADAQ6YHU6 1953 aa12.45□□□□□ -0.42
CHRNA1-207ENST00000435083 NUP205Q92621 2012 aa12.45□□□□□ -0.42
CHRNA1-207ENST00000435083 C2orf78A6NCI8 922 aa12.45□□□□□ -0.42
CHRNA1-207ENST00000435083 PATE3B3GLJ2 98 aa12.45□□□□□ -0.42
CHRNA1-207ENST00000435083 HDCP19113 662 aa12.45□□□□□ -0.42
CHRNA1-207ENST00000435083 ADSSP30520 456 aa12.45□□□□□ -0.42
CHRNA1-207ENST00000435083 KCNB1Q14721 858 aa12.45□□□□□ -0.42
CHRNA1-207ENST00000435083 CCDC142Q17RM4 750 aa12.45□□□□□ -0.42
CHRNA1-207ENST00000435083 PMS2CLQ68D20 193 aa12.45□□□□□ -0.42
CHRNA1-207ENST00000435083 ANO7Q6IWH7 933 aa12.45□□□□□ -0.42
CHRNA1-207ENST00000435083 DYMQ7RTS9 669 aa12.45□□□□□ -0.42
CHRNA1-207ENST00000435083 CYP2U1Q7Z449 544 aa12.45□□□□□ -0.42
CHRNA1-207ENST00000435083 C11orf74Q86VG3 221 aa12.45□□□□□ -0.42
CHRNA1-207ENST00000435083 SFR1Q86XK3 245 aa12.45□□□□□ -0.42
CHRNA1-207ENST00000435083 CCDC33Q8N5R6 958 aa12.45□□□□□ -0.42
CHRNA1-207ENST00000435083 CSGALNACT2Q8N6G5 542 aa12.45□□□□□ -0.42
CHRNA1-207ENST00000435083 FSIP1Q8NA03 581 aa12.45□□□□□ -0.42
CHRNA1-207ENST00000435083 CCDC26Q8TAB7 109 aa12.45□□□□□ -0.42
CHRNA1-207ENST00000435083 USP33Q8TEY7 942 aa12.45□□□□□ -0.42
CHRNA1-207ENST00000435083 CACTINQ8WUQ7 758 aaKnown RBP12.45□□□□□ -0.42
CHRNA1-207ENST00000435083 ST6GALNAC4Q9H4F1 302 aa12.45□□□□□ -0.42
CHRNA1-207ENST00000435083 TMEM9BQ9NQ34 198 aa12.45□□□□□ -0.42
CHRNA1-207ENST00000435083 PPP4R2Q9NY27 417 aa12.45□□□□□ -0.42
CHRNA1-207ENST00000435083 GCNT4Q9P109 453 aa12.45□□□□□ -0.42
CHRNA1-207ENST00000435083 ZMIZ1Q9ULJ6 1067 aa12.45□□□□□ -0.42
CHRNA1-207ENST00000435083 HCRTO43612 131 aa12.44□□□□□ -0.42
CHRNA1-207ENST00000435083 NFATC1O95644 943 aa12.44□□□□□ -0.42
CHRNA1-207ENST00000435083 KRT19P08727 400 aa12.44□□□□□ -0.42
CHRNA1-207ENST00000435083 BCKDHBP21953 392 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms