RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 EPB41P11171 864 aaKnown RBP6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 PTPN1P18031 435 aaKnown RBP6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 CYP2F1P24903 491 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 SOX11P35716 441 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 PIK3CAP42336 1068 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 ALDH1A3P47895 512 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 LHX1P48742 406 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 RPIAP49247 311 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 GPR15P49685 360 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 AP3M2P53677 418 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 EPHB3P54753 998 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 CLDN10P78369 228 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 TSPY1Q01534 308 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 LRMPQ12912 555 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 NR1H3Q13133 447 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 NCOA4Q13772 614 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 TAF12Q16514 161 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 NFIL3Q16649 462 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 DDR2Q16832 855 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 CCDC142Q17RM4 750 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 ZNF699Q32M78 642 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 PABPC1LQ4VXU2 614 aaKnown RBP6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 ZCWPW2Q504Y3 356 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 COBLL1Q53SF7 1204 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 CYP4A22Q5TCH4 519 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 IQCEQ6IPM2 695 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 SCARA5Q6ZMJ2 495 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 CLEC17AQ6ZS10 378 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 DPH6Q7L8W6 267 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 OTOP3Q7RTS5 596 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 DNAJB7Q7Z6W7 309 aaPredicted RBP6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 BPHLQ86WA6 291 aaPredicted RBP6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 SPATA2LQ8IUW3 424 aaPredicted RBP6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 SCN4BQ8IWT1 228 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 TMEM86AQ8N2M4 240 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 ELMOD1Q8N336 334 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 TDRD5Q8NAT2 981 aaKnown RBP6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 STKLD1Q8NE28 680 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 CMASQ8NFW8 434 aaPredicted RBP6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 TAS1R2Q8TE23 839 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 TMEM174Q8WUU8 243 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 KBTBD7Q8WVZ9 684 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 SYAP1Q96A49 352 aaPredicted RBP6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 TCEAL4Q96EI5 215 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 MYADMQ96S97 322 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 SYT15Q9BQS2 421 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 ACBD6Q9BR61 282 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 RPP25Q9BUL9 199 aaKnown RBP6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 RHOBTB2Q9BYZ6 727 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 GTPBP4Q9BZE4 634 aaKnown RBP6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 SDCBP2Q9H190 292 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 NUP62CLQ9H1M0 184 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 SMOC2Q9H3U7 446 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 DPEP3Q9H4B8 488 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 MAGEC2Q9UBF1 373 aaPredicted RBP6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 MAGED2Q9UNF1 606 aaPredicted RBP6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 MRPS23Q9Y3D9 190 aaKnown RBP6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 NME7Q9Y5B8 376 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 PCDHB5Q9Y5E4 795 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 CHD9Q3L8U1 2897 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 CLUHO75153 1309 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 DENND4AQ7Z401 1863 aa6.17□□□□□ -1.42
HMGB3P24-201ENST00000433260 BICDL2A1A5D9 508 aa6.16□□□□□ -1.42
HMGB3P24-201ENST00000433260 FAM86C2PA6NEL3 165 aa6.16□□□□□ -1.42
HMGB3P24-201ENST00000433260 PI4K2BG5E9Z4 385 aa6.16□□□□□ -1.42
HMGB3P24-201ENST00000433260 GABRDO14764 452 aa6.16□□□□□ -1.42
HMGB3P24-201ENST00000433260 RHOP08100 348 aa6.16□□□□□ -1.42
HMGB3P24-201ENST00000433260 HAPLN1P10915 354 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P24-201ENST00000433260 LAMP2P13473 410 aa6.16□□□□□ -1.42
HMGB3P24-201ENST00000433260 ALADP13716 330 aa6.16□□□□□ -1.42
HMGB3P24-201ENST00000433260 CD58P19256 250 aa6.16□□□□□ -1.42
HMGB3P24-201ENST00000433260 WARSP23381 471 aaKnown RBP6.16□□□□□ -1.42
HMGB3P24-201ENST00000433260 ATICP31939 592 aa6.16□□□□□ -1.42
HMGB3P24-201ENST00000433260 GRIK1P39086 918 aa6.16□□□□□ -1.42
HMGB3P24-201ENST00000433260 PPP1R2P41236 205 aa6.16□□□□□ -1.42
HMGB3P24-201ENST00000433260 TUFMP49411 452 aaKnown RBP6.16□□□□□ -1.42
HMGB3P24-201ENST00000433260 MCCD1P59942 119 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P24-201ENST00000433260 LRRC63Q05C16 580 aa6.16□□□□□ -1.42
HMGB3P24-201ENST00000433260 PAK1Q13153 545 aa6.16□□□□□ -1.42
HMGB3P24-201ENST00000433260 MTMR3Q13615 1198 aa6.16□□□□□ -1.42
HMGB3P24-201ENST00000433260 TEAD2Q15562 447 aa6.16□□□□□ -1.42
HMGB3P24-201ENST00000433260 TPD52L1Q16890 204 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P24-201ENST00000433260 SLC5A9Q2M3M2 681 aa6.16□□□□□ -1.42
HMGB3P24-201ENST00000433260 ZACNQ401N2 412 aa6.16□□□□□ -1.42
HMGB3P24-201ENST00000433260 HSP90AA4PQ58FG1 418 aa6.16□□□□□ -1.42
HMGB3P24-201ENST00000433260 MDH1BQ5I0G3 518 aa6.16□□□□□ -1.42
HMGB3P24-201ENST00000433260 INTS6LQ5JSJ4 861 aaKnown RBP6.16□□□□□ -1.42
HMGB3P24-201ENST00000433260 KRT39Q6A163 491 aa6.16□□□□□ -1.42
HMGB3P24-201ENST00000433260 PARM1Q6UWI2 310 aa6.16□□□□□ -1.42
HMGB3P24-201ENST00000433260 CYP26C1Q6V0L0 522 aa6.16□□□□□ -1.42
HMGB3P24-201ENST00000433260 PDZD4Q76G19 769 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P24-201ENST00000433260 FILIP1Q7Z7B0 1213 aa6.16□□□□□ -1.42
HMGB3P24-201ENST00000433260 ACOT1Q86TX2 421 aa6.16□□□□□ -1.42
HMGB3P24-201ENST00000433260 TRIML1Q8N9V2 468 aa6.16□□□□□ -1.42
HMGB3P24-201ENST00000433260 CCDC150Q8NCX0 1101 aa6.16□□□□□ -1.42
HMGB3P24-201ENST00000433260 BAP1Q92560 729 aa6.16□□□□□ -1.42
HMGB3P24-201ENST00000433260 SEMA4DQ92854 862 aa6.16□□□□□ -1.42
HMGB3P24-201ENST00000433260 FGF13Q92913 245 aa6.16□□□□□ -1.42
HMGB3P24-201ENST00000433260 ZSWIM3Q96MP5 696 aa6.16□□□□□ -1.42
HMGB3P24-201ENST00000433260 MED15Q96RN5 788 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms