RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 NR2E3Q9Y5X4 410 aa2.66□□□□□ -1.98
CDC40-204ENST00000431461 ACTL7AQ9Y615 435 aa2.66□□□□□ -1.98
CDC40-204ENST00000431461 WNT6Q9Y6F9 365 aa2.66□□□□□ -1.98
CDC40-204ENST00000431461 CCDC187A0A096LP49 1063 aa2.65□□□□□ -1.99
CDC40-204ENST00000431461 ERVV-2B6SEH9 535 aa2.65□□□□□ -1.99
CDC40-204ENST00000431461 PRR23D1E9PI22 279 aaPredicted RBP2.65□□□□□ -1.99
CDC40-204ENST00000431461 TPP1O14773 563 aa2.65□□□□□ -1.99
CDC40-204ENST00000431461 KIAA0391O15091 583 aaKnown RBP2.65□□□□□ -1.99
CDC40-204ENST00000431461 GRM6O15303 877 aa2.65□□□□□ -1.99
CDC40-204ENST00000431461 NTN1O95631 604 aa2.65□□□□□ -1.99
CDC40-204ENST00000431461 PRR35P0CG20 571 aa2.65□□□□□ -1.99
CDC40-204ENST00000431461 PRR23D2P0DMB1 279 aaPredicted RBP2.65□□□□□ -1.99
CDC40-204ENST00000431461 RHCEP18577 417 aa2.65□□□□□ -1.99
CDC40-204ENST00000431461 PCSK1P29120 753 aa2.65□□□□□ -1.99
CDC40-204ENST00000431461 PRDX5P30044 214 aa2.65□□□□□ -1.99
CDC40-204ENST00000431461 WNT3P56703 355 aa2.65□□□□□ -1.99
CDC40-204ENST00000431461 RHDQ02161 417 aa2.65□□□□□ -1.99
CDC40-204ENST00000431461 TFF2Q03403 129 aa2.65□□□□□ -1.99
CDC40-204ENST00000431461 SLC10A2Q12908 348 aaPredicted RBP2.65□□□□□ -1.99
CDC40-204ENST00000431461 SNAPC2Q13487 334 aa2.65□□□□□ -1.99
CDC40-204ENST00000431461 RAB32Q13637 225 aa2.65□□□□□ -1.99
CDC40-204ENST00000431461 ZNF267Q14586 743 aaPredicted RBP2.65□□□□□ -1.99
CDC40-204ENST00000431461 GEN1Q17RS7 908 aa2.65□□□□□ -1.99
CDC40-204ENST00000431461 LONRF3Q496Y0 759 aa2.65□□□□□ -1.99
CDC40-204ENST00000431461 CCDC93Q567U6 631 aa2.65□□□□□ -1.99
CDC40-204ENST00000431461 KHDC1LQ5JSQ8 128 aa2.65□□□□□ -1.99
CDC40-204ENST00000431461 RNF220Q5VTB9 566 aa2.65□□□□□ -1.99
CDC40-204ENST00000431461 LMBRD2Q68DH5 695 aaPredicted RBP2.65□□□□□ -1.99
CDC40-204ENST00000431461 SFRP4Q6FHJ7 346 aaPredicted RBP2.65□□□□□ -1.99
CDC40-204ENST00000431461 NPNTQ6UXI9 565 aa2.65□□□□□ -1.99
CDC40-204ENST00000431461 ZNF783Q6ZMS7 281 aa2.65□□□□□ -1.99
CDC40-204ENST00000431461 CCDC149Q6ZUS6 474 aa2.65□□□□□ -1.99
CDC40-204ENST00000431461 KRTAP5-2Q701N4 177 aa2.65□□□□□ -1.99
CDC40-204ENST00000431461 PEG10Q86TG7 708 aaKnown RBP2.65□□□□□ -1.99
CDC40-204ENST00000431461 FAM90A1Q86YD7 464 aa2.65□□□□□ -1.99
CDC40-204ENST00000431461 CCDC146Q8IYE0 955 aa2.65□□□□□ -1.99
CDC40-204ENST00000431461 SDR16C5Q8N3Y7 309 aa2.65□□□□□ -1.99
CDC40-204ENST00000431461 ZBTB34Q8NCN2 500 aa2.65□□□□□ -1.99
CDC40-204ENST00000431461 STON2Q8WXE9 905 aa2.65□□□□□ -1.99
CDC40-204ENST00000431461 TSR2Q969E8 191 aaKnown RBP2.65□□□□□ -1.99
CDC40-204ENST00000431461 SMOQ99835 787 aa2.65□□□□□ -1.99
CDC40-204ENST00000431461 KRTAP4-3Q9BYR4 195 aa2.65□□□□□ -1.99
CDC40-204ENST00000431461 UNKQ9C0B0 810 aaKnown RBP2.65□□□□□ -1.99
CDC40-204ENST00000431461 MRPL46Q9H2W6 279 aaKnown RBP2.65□□□□□ -1.99
CDC40-204ENST00000431461 ANLNQ9NQW6 1124 aa2.65□□□□□ -1.99
CDC40-204ENST00000431461 DDX21Q9NR30 783 aaKnown RBP eCLIP2.65□□□□□ -1.99
CDC40-204ENST00000431461 SLC23A1Q9UHI7 598 aa2.65□□□□□ -1.99
CDC40-204ENST00000431461 BTBD3Q9Y2F9 522 aa2.65□□□□□ -1.99
CDC40-204ENST00000431461 MED16Q9Y2X0 877 aa2.65□□□□□ -1.99
CDC40-204ENST00000431461 OBSCNQ5VST9 7968 aa2.65□□□□□ -1.99
CDC40-204ENST00000431461 SPATA31A3Q5VYP0 1347 aa2.65□□□□□ -1.99
CDC40-204ENST00000431461 CCDC194A0A1B0GVG4 234 aa2.64□□□□□ -1.99
CDC40-204ENST00000431461 A0A1W2PS29 197 aa2.64□□□□□ -1.99
CDC40-204ENST00000431461 CFAP69A5D8W1 941 aa2.64□□□□□ -1.99
CDC40-204ENST00000431461 NT5C1B-RDH14C9J2C7 533 aa2.64□□□□□ -1.99
CDC40-204ENST00000431461 H3BNC9 293 aa2.64□□□□□ -1.99
CDC40-204ENST00000431461 F2RL2O00254 374 aa2.64□□□□□ -1.99
CDC40-204ENST00000431461 PRPF3O43395 683 aaKnown RBP2.64□□□□□ -1.99
CDC40-204ENST00000431461 MOSPD3O75425 235 aa2.64□□□□□ -1.99
CDC40-204ENST00000431461 ALDH2P05091 517 aa2.64□□□□□ -1.99
CDC40-204ENST00000431461 EN2P19622 333 aaPredicted RBP2.64□□□□□ -1.99
CDC40-204ENST00000431461 KCNJ5P48544 419 aa2.64□□□□□ -1.99
CDC40-204ENST00000431461 TUBA4AP68366 448 aa2.64□□□□□ -1.99
CDC40-204ENST00000431461 NOMO3P69849 1222 aa2.64□□□□□ -1.99
CDC40-204ENST00000431461 TCF15Q12870 199 aa2.64□□□□□ -1.99
CDC40-204ENST00000431461 GRM1Q13255 1194 aa2.64□□□□□ -1.99
CDC40-204ENST00000431461 PLS1Q14651 629 aa2.64□□□□□ -1.99
CDC40-204ENST00000431461 HLXQ14774 488 aaPredicted RBP2.64□□□□□ -1.99
CDC40-204ENST00000431461 BRD3Q15059 726 aa2.64□□□□□ -1.99
CDC40-204ENST00000431461 LRRC41Q15345 812 aa2.64□□□□□ -1.99
CDC40-204ENST00000431461 CNN3Q15417 329 aaKnown RBP2.64□□□□□ -1.99
CDC40-204ENST00000431461 KIAA0753Q2KHM9 967 aa2.64□□□□□ -1.99
CDC40-204ENST00000431461 NOMO2Q5JPE7 1267 aa2.64□□□□□ -1.99
CDC40-204ENST00000431461 TEDDM1Q5T9Z0 273 aa2.64□□□□□ -1.99
CDC40-204ENST00000431461 FAM160B1Q5W0V3 765 aa2.64□□□□□ -1.99
CDC40-204ENST00000431461 OVCH2Q7RTZ1 564 aa2.64□□□□□ -1.99
CDC40-204ENST00000431461 CLNKQ7Z7G1 428 aa2.64□□□□□ -1.99
CDC40-204ENST00000431461 C14orf80Q86SX3 495 aa2.64□□□□□ -1.99
CDC40-204ENST00000431461 DPP9Q86TI2 863 aa2.64□□□□□ -1.99
CDC40-204ENST00000431461 RAVER1Q8IY67 606 aaKnown RBP2.64□□□□□ -1.99
CDC40-204ENST00000431461 SAMD3Q8N6K7 520 aa2.64□□□□□ -1.99
CDC40-204ENST00000431461 ACRBPQ8NEB7 543 aa2.64□□□□□ -1.99
CDC40-204ENST00000431461 PJA1Q8NG27 643 aa2.64□□□□□ -1.99
CDC40-204ENST00000431461 TFAP2BQ92481 460 aa2.64□□□□□ -1.99
CDC40-204ENST00000431461 RPL36ALQ969Q0 106 aaKnown RBP2.64□□□□□ -1.99
CDC40-204ENST00000431461 APIPQ96GX9 242 aa2.64□□□□□ -1.99
CDC40-204ENST00000431461 PGBD1Q96JS3 809 aa2.64□□□□□ -1.99
CDC40-204ENST00000431461 MSLNLQ96KJ4 702 aa2.64□□□□□ -1.99
CDC40-204ENST00000431461 TNIP3Q96KP6 325 aa2.64□□□□□ -1.99
CDC40-204ENST00000431461 STRBPQ96SI9 672 aaKnown RBP2.64□□□□□ -1.99
CDC40-204ENST00000431461 VRK1Q99986 396 aaPredicted RBP2.64□□□□□ -1.99
CDC40-204ENST00000431461 COLEC11Q9BWP8 271 aa2.64□□□□□ -1.99
CDC40-204ENST00000431461 B3GNT5Q9BYG0 378 aa2.64□□□□□ -1.99
CDC40-204ENST00000431461 SEMA4CQ9C0C4 833 aa2.64□□□□□ -1.99
CDC40-204ENST00000431461 ZNF518BQ9C0D4 1074 aa2.64□□□□□ -1.99
CDC40-204ENST00000431461 LDAHQ9H6V9 325 aa2.64□□□□□ -1.99
CDC40-204ENST00000431461 ARNT2Q9HBZ2 717 aa2.64□□□□□ -1.99
CDC40-204ENST00000431461 PNPLA8Q9NP80 782 aa2.64□□□□□ -1.99
CDC40-204ENST00000431461 ST6GALNAC1Q9NSC7 600 aaPredicted RBP2.64□□□□□ -1.99
CDC40-204ENST00000431461 INTS13Q9NVM9 706 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms