RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 PIWIL1Q96J94 861 aaKnown RBP17.6■□□□□ 0.41
USHBP1-203ENST00000431146 CHST7Q9NS84 486 aa17.6■□□□□ 0.41
USHBP1-203ENST00000431146 TRMT13Q9NUP7 481 aaKnown RBP17.6■□□□□ 0.41
USHBP1-203ENST00000431146 FAM105AQ9NUU6 356 aa17.6■□□□□ 0.41
USHBP1-203ENST00000431146 AGPSO00116 658 aa17.59■□□□□ 0.41
USHBP1-203ENST00000431146 MLH1P40692 756 aa17.59■□□□□ 0.41
USHBP1-203ENST00000431146 NKX3-2P78367 333 aa17.59■□□□□ 0.41
USHBP1-203ENST00000431146 MGAT3Q09327 533 aa17.59■□□□□ 0.41
USHBP1-203ENST00000431146 GPS2Q13227 327 aa17.59■□□□□ 0.41
USHBP1-203ENST00000431146 DHX34Q14147 1143 aaKnown RBP17.59■□□□□ 0.41
USHBP1-203ENST00000431146 PPP2R5EQ16537 467 aa17.59■□□□□ 0.41
USHBP1-203ENST00000431146 TTC30AQ86WT1 665 aa17.59■□□□□ 0.41
USHBP1-203ENST00000431146 ERP44Q9BS26 406 aa17.59■□□□□ 0.41
USHBP1-203ENST00000431146 ACBD3Q9H3P7 528 aa17.59■□□□□ 0.41
USHBP1-203ENST00000431146 R3HDM2Q9Y2K5 976 aaKnown RBP17.59■□□□□ 0.41
USHBP1-203ENST00000431146 E5RJQ4 531 aa17.59■□□□□ 0.41
USHBP1-203ENST00000431146 GHRP10912 638 aa17.59■□□□□ 0.41
USHBP1-203ENST00000431146 CD52P31358 61 aa17.59■□□□□ 0.41
USHBP1-203ENST00000431146 TAP1Q03518 808 aa17.59■□□□□ 0.41
USHBP1-203ENST00000431146 CYP1B1Q16678 543 aa17.59■□□□□ 0.41
USHBP1-203ENST00000431146 FAM102AQ5T9C2 384 aaPredicted RBP17.59■□□□□ 0.41
USHBP1-203ENST00000431146 TTC39CQ8N584 583 aa17.59■□□□□ 0.41
USHBP1-203ENST00000431146 SEC14L1Q92503 715 aa17.59■□□□□ 0.41
USHBP1-203ENST00000431146 PCYOX1Q9UHG3 505 aa17.59■□□□□ 0.41
USHBP1-203ENST00000431146 SNX24Q9Y343 169 aa17.59■□□□□ 0.41
USHBP1-203ENST00000431146 GOLGA6BA6NDN3 693 aa17.58■□□□□ 0.4
USHBP1-203ENST00000431146 XPOTO43592 962 aaKnown RBP17.58■□□□□ 0.4
USHBP1-203ENST00000431146 GRAP2O75791 330 aa17.58■□□□□ 0.4
USHBP1-203ENST00000431146 SYF2O95926 243 aaKnown RBP17.58■□□□□ 0.4
USHBP1-203ENST00000431146 KRT1P04264 644 aa17.58■□□□□ 0.4
USHBP1-203ENST00000431146 KRT10P13645 584 aa17.58■□□□□ 0.4
USHBP1-203ENST00000431146 CCDC130P13994 396 aa17.58■□□□□ 0.4
USHBP1-203ENST00000431146 GABRB2P47870 512 aa17.58■□□□□ 0.4
USHBP1-203ENST00000431146 TAF6P49848 677 aa17.58■□□□□ 0.4
USHBP1-203ENST00000431146 ADCY2Q08462 1091 aa17.58■□□□□ 0.4
USHBP1-203ENST00000431146 PIGHQ14442 188 aaPredicted RBP17.58■□□□□ 0.4
USHBP1-203ENST00000431146 SMTNL2Q2TAL5 461 aa17.58■□□□□ 0.4
USHBP1-203ENST00000431146 KAZNQ674X7 775 aa17.58■□□□□ 0.4
USHBP1-203ENST00000431146 DUPD1Q68J44 220 aa17.58■□□□□ 0.4
USHBP1-203ENST00000431146 PMF1Q6P1K2 205 aa17.58■□□□□ 0.4
USHBP1-203ENST00000431146 ARFGAP1Q8N6T3 406 aa17.58■□□□□ 0.4
USHBP1-203ENST00000431146 ZNF560Q96MR9 790 aa17.58■□□□□ 0.4
USHBP1-203ENST00000431146 GAD1Q99259 594 aa17.58■□□□□ 0.4
USHBP1-203ENST00000431146 OSBPL8Q9BZF1 889 aa17.58■□□□□ 0.4
USHBP1-203ENST00000431146 RAB17Q9H0T7 212 aa17.58■□□□□ 0.4
USHBP1-203ENST00000431146 CREBZFQ9NS37 354 aa17.58■□□□□ 0.4
USHBP1-203ENST00000431146 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.58■□□□□ 0.4
USHBP1-203ENST00000431146 KIAA1257Q9ULG3 409 aa17.58■□□□□ 0.4
USHBP1-203ENST00000431146 LILRA4P59901 499 aa17.57■□□□□ 0.4
USHBP1-203ENST00000431146 NNTQ13423 1086 aa17.57■□□□□ 0.4
USHBP1-203ENST00000431146 ZNF268Q14587 947 aaPredicted RBP17.57■□□□□ 0.4
USHBP1-203ENST00000431146 CCDC142Q17RM4 750 aa17.57■□□□□ 0.4
USHBP1-203ENST00000431146 SMYD5Q6GMV2 418 aa17.57■□□□□ 0.4
USHBP1-203ENST00000431146 OR6B2Q6IFH4 312 aa17.57■□□□□ 0.4
USHBP1-203ENST00000431146 FAM183BPQ6ZVS7 135 aa17.57■□□□□ 0.4
USHBP1-203ENST00000431146 GSTCDQ8NEC7 633 aa17.57■□□□□ 0.4
USHBP1-203ENST00000431146 EXD1Q8NHP7 514 aa17.57■□□□□ 0.4
USHBP1-203ENST00000431146 RAET1EQ8TD07 263 aa17.57■□□□□ 0.4
USHBP1-203ENST00000431146 MCRS1Q96EZ8 462 aa17.57■□□□□ 0.4
USHBP1-203ENST00000431146 PPP1R10Q96QC0 940 aaKnown RBP17.57■□□□□ 0.4
USHBP1-203ENST00000431146 ZWILCHQ9H900 591 aa17.57■□□□□ 0.4
USHBP1-203ENST00000431146 MIOSQ9NXC5 875 aa17.57■□□□□ 0.4
USHBP1-203ENST00000431146 DDX20Q9UHI6 824 aaKnown RBP17.57■□□□□ 0.4
USHBP1-203ENST00000431146 PADI3Q9ULW8 664 aa17.57■□□□□ 0.4
USHBP1-203ENST00000431146 FAM187AA6NFU0 413 aa17.57■□□□□ 0.4
USHBP1-203ENST00000431146 MGEA5O60502 916 aa17.57■□□□□ 0.4
USHBP1-203ENST00000431146 ADORA2BP29275 332 aa17.57■□□□□ 0.4
USHBP1-203ENST00000431146 GNL1P36915 607 aaPredicted RBP17.57■□□□□ 0.4
USHBP1-203ENST00000431146 AARSP49588 968 aaKnown RBP eCLIP17.57■□□□□ 0.4
USHBP1-203ENST00000431146 ITGA7Q13683 1181 aa17.57■□□□□ 0.4
USHBP1-203ENST00000431146 HSP90B2PQ58FF3 399 aa17.57■□□□□ 0.4
USHBP1-203ENST00000431146 KCNT1Q5JUK3 1230 aa17.57■□□□□ 0.4
USHBP1-203ENST00000431146 MFSD7Q6UXD7 560 aa17.57■□□□□ 0.4
USHBP1-203ENST00000431146 RNF169Q8NCN4 708 aa17.57■□□□□ 0.4
USHBP1-203ENST00000431146 APPL2Q8NEU8 664 aa17.57■□□□□ 0.4
USHBP1-203ENST00000431146 RAPGEF5Q92565 580 aa17.57■□□□□ 0.4
USHBP1-203ENST00000431146 WDR35Q9P2L0 1181 aa17.57■□□□□ 0.4
USHBP1-203ENST00000431146 NOD1Q9Y239 953 aa17.57■□□□□ 0.4
USHBP1-203ENST00000431146 FAN1Q9Y2M0 1017 aa17.57■□□□□ 0.4
USHBP1-203ENST00000431146 LRCH4O75427 683 aa17.56■□□□□ 0.4
USHBP1-203ENST00000431146 IL1R2P27930 398 aa17.56■□□□□ 0.4
USHBP1-203ENST00000431146 CST5P28325 142 aaPredicted RBP17.56■□□□□ 0.4
USHBP1-203ENST00000431146 KLF1Q13351 362 aaPredicted RBP17.56■□□□□ 0.4
USHBP1-203ENST00000431146 MAP3K21Q5TCX8 1036 aa17.56■□□□□ 0.4
USHBP1-203ENST00000431146 NIPA2Q8N8Q9 360 aa17.56■□□□□ 0.4
USHBP1-203ENST00000431146 C12orf50Q8NA57 414 aaPredicted RBP17.56■□□□□ 0.4
USHBP1-203ENST00000431146 PCSK9Q8NBP7 692 aaKnown RBP17.56■□□□□ 0.4
USHBP1-203ENST00000431146 SLITRK1Q96PX8 696 aa17.56■□□□□ 0.4
USHBP1-203ENST00000431146 SNX25Q9H3E2 840 aa17.56■□□□□ 0.4
USHBP1-203ENST00000431146 FAM124BQ9H5Z6 455 aaPredicted RBP17.56■□□□□ 0.4
USHBP1-203ENST00000431146 LRRC19Q9H756 370 aa17.56■□□□□ 0.4
USHBP1-203ENST00000431146 FAM114A2Q9NRY5 505 aa17.56■□□□□ 0.4
USHBP1-203ENST00000431146 GDAP2Q9NXN4 497 aa17.56■□□□□ 0.4
USHBP1-203ENST00000431146 VPS18Q9P253 973 aa17.56■□□□□ 0.4
USHBP1-203ENST00000431146 RASAL2Q9UJF2 1139 aa17.56■□□□□ 0.4
USHBP1-203ENST00000431146 RPL21P46778 160 aaKnown RBP17.56■□□□□ 0.4
USHBP1-203ENST00000431146 ACLYP53396 1101 aa17.56■□□□□ 0.4
USHBP1-203ENST00000431146 GSCP56915 257 aaPredicted RBP17.56■□□□□ 0.4
USHBP1-203ENST00000431146 HTRA3P83110 453 aa17.56■□□□□ 0.4
USHBP1-203ENST00000431146 TAF5Q15542 800 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms