RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 PIDD1Q9HB75 910 aa26.76■■□□□ 1.87
CPNE1-212ENST00000430570 HCFC1R1Q9NWW0 138 aa26.76■■□□□ 1.87
CPNE1-212ENST00000430570 ATF6P18850 670 aa26.75■■□□□ 1.87
CPNE1-212ENST00000430570 BDNFP23560 247 aa26.75■■□□□ 1.87
CPNE1-212ENST00000430570 TUFMP49411 452 aaKnown RBP26.75■■□□□ 1.87
CPNE1-212ENST00000430570 RAD23BP54727 409 aa26.75■■□□□ 1.87
CPNE1-212ENST00000430570 GCNT1Q02742 428 aa26.75■■□□□ 1.87
CPNE1-212ENST00000430570 CBX2Q14781 532 aaPredicted RBP26.75■■□□□ 1.87
CPNE1-212ENST00000430570 SMAD2Q15796 467 aaKnown RBP26.75■■□□□ 1.87
CPNE1-212ENST00000430570 PUS10Q3MIT2 529 aaKnown RBP26.75■■□□□ 1.87
CPNE1-212ENST00000430570 CFAP221Q4G0U5 840 aa26.75■■□□□ 1.87
CPNE1-212ENST00000430570 PAQR9Q6ZVX9 377 aa26.75■■□□□ 1.87
CPNE1-212ENST00000430570 SLC4A11Q8NBS3 891 aa26.75■■□□□ 1.87
CPNE1-212ENST00000430570 FUBP3Q96I24 572 aaKnown RBP eCLIP26.75■■□□□ 1.87
CPNE1-212ENST00000430570 POMKQ9H5K3 350 aa26.75■■□□□ 1.87
CPNE1-212ENST00000430570 ABCB6Q9NP58 842 aa26.75■■□□□ 1.87
CPNE1-212ENST00000430570 DNMT3BQ9UBC3 853 aaKnown RBP26.75■■□□□ 1.87
CPNE1-212ENST00000430570 TPM2P07951 284 aa26.74■■□□□ 1.87
CPNE1-212ENST00000430570 POU2F2P09086 479 aa26.74■■□□□ 1.87
CPNE1-212ENST00000430570 MTHFRP42898 656 aa26.74■■□□□ 1.87
CPNE1-212ENST00000430570 ALDH1A3P47895 512 aa26.74■■□□□ 1.87
CPNE1-212ENST00000430570 ZNF445P59923 1031 aa26.74■■□□□ 1.87
CPNE1-212ENST00000430570 NTHL1P78549 312 aa26.74■■□□□ 1.87
CPNE1-212ENST00000430570 SDHAF4Q5VUM1 108 aa26.74■■□□□ 1.87
CPNE1-212ENST00000430570 CYP26C1Q6V0L0 522 aa26.74■■□□□ 1.87
CPNE1-212ENST00000430570 GRASPQ7Z6J2 395 aaPredicted RBP26.74■■□□□ 1.87
CPNE1-212ENST00000430570 RIPOR3Q96MK2 946 aa26.74■■□□□ 1.87
CPNE1-212ENST00000430570 ZNF518BQ9C0D4 1074 aa26.74■■□□□ 1.87
CPNE1-212ENST00000430570 APEX2Q9UBZ4 518 aa26.74■■□□□ 1.87
CPNE1-212ENST00000430570 AJAP1Q9UKB5 411 aaPredicted RBP26.74■■□□□ 1.87
CPNE1-212ENST00000430570 LGALS16A8MUM7 142 aa26.73■■□□□ 1.87
CPNE1-212ENST00000430570 RNF225M0QZC1 329 aaPredicted RBP26.73■■□□□ 1.87
CPNE1-212ENST00000430570 XYLBO75191 536 aa26.73■■□□□ 1.87
CPNE1-212ENST00000430570 CCDC130P13994 396 aa26.73■■□□□ 1.87
CPNE1-212ENST00000430570 KLK7P49862 253 aa26.73■■□□□ 1.87
CPNE1-212ENST00000430570 CACNA2D1P54289 1103 aa26.73■■□□□ 1.87
CPNE1-212ENST00000430570 DDR2Q16832 855 aa26.73■■□□□ 1.87
CPNE1-212ENST00000430570 FUKQ8N0W3 1084 aa26.73■■□□□ 1.87
CPNE1-212ENST00000430570 TTC39CQ8N584 583 aa26.73■■□□□ 1.87
CPNE1-212ENST00000430570 GPR152Q8TDT2 470 aa26.73■■□□□ 1.87
CPNE1-212ENST00000430570 GIPC2Q8TF65 315 aa26.73■■□□□ 1.87
CPNE1-212ENST00000430570 TMEM176AQ96HP8 235 aa26.73■■□□□ 1.87
CPNE1-212ENST00000430570 FAM124BQ9H5Z6 455 aaPredicted RBP26.73■■□□□ 1.87
CPNE1-212ENST00000430570 FAM49BQ9NUQ9 324 aa26.73■■□□□ 1.87
CPNE1-212ENST00000430570 TMEM30AQ9NV96 361 aa26.73■■□□□ 1.87
CPNE1-212ENST00000430570 PCDHB4Q9Y5E5 795 aa26.73■■□□□ 1.87
CPNE1-212ENST00000430570 TCF20Q9UGU0 1960 aaKnown RBP26.72■■□□□ 1.87
CPNE1-212ENST00000430570 PTPRDP23468 1912 aa26.72■■□□□ 1.87
CPNE1-212ENST00000430570 YWHAEP62258 255 aaKnown RBP26.72■■□□□ 1.87
CPNE1-212ENST00000430570 HS6ST3Q8IZP7 471 aa26.72■■□□□ 1.87
CPNE1-212ENST00000430570 STKLD1Q8NE28 680 aa26.72■■□□□ 1.87
CPNE1-212ENST00000430570 HEXIM2Q96MH2 286 aaKnown RBP26.72■■□□□ 1.87
CPNE1-212ENST00000430570 LSM14BQ9BX40 385 aaKnown RBP26.72■■□□□ 1.87
CPNE1-212ENST00000430570 WDR6Q9NNW5 1121 aaKnown RBP26.72■■□□□ 1.87
CPNE1-212ENST00000430570 NOTCH4Q99466 2003 aa26.71■■□□□ 1.87
CPNE1-212ENST00000430570 MAGEA11P43364 429 aa26.71■■□□□ 1.87
CPNE1-212ENST00000430570 EPHB3P54753 998 aa26.71■■□□□ 1.87
CPNE1-212ENST00000430570 PLD1Q13393 1074 aa26.71■■□□□ 1.87
CPNE1-212ENST00000430570 FKBP15Q5T1M5 1219 aa26.71■■□□□ 1.87
CPNE1-212ENST00000430570 TMEM270Q6UE05 265 aa26.71■■□□□ 1.87
CPNE1-212ENST00000430570 SCN4BQ8IWT1 228 aa26.71■■□□□ 1.87
CPNE1-212ENST00000430570 SLC2A14Q8TDB8 520 aa26.71■■□□□ 1.87
CPNE1-212ENST00000430570 CYFIP2Q96F07 1278 aa26.71■■□□□ 1.87
CPNE1-212ENST00000430570 ZNF512Q96ME7 567 aaPredicted RBP26.71■■□□□ 1.87
CPNE1-212ENST00000430570 NECTIN4Q96NY8 510 aa26.71■■□□□ 1.87
CPNE1-212ENST00000430570 MED10Q9BTT4 135 aa26.71■■□□□ 1.87
CPNE1-212ENST00000430570 DNAJC12Q9UKB3 198 aa26.71■■□□□ 1.87
CPNE1-212ENST00000430570 TEX33O43247 280 aa26.7■■□□□ 1.87
CPNE1-212ENST00000430570 PTPN2P17706 415 aa26.7■■□□□ 1.87
CPNE1-212ENST00000430570 UBXN1Q04323 297 aa26.7■■□□□ 1.87
CPNE1-212ENST00000430570 ARHGAP44Q17R89 818 aa26.7■■□□□ 1.87
CPNE1-212ENST00000430570 KLHDC7AQ5VTJ3 777 aa26.7■■□□□ 1.87
CPNE1-212ENST00000430570 VSTM1Q6UX27 236 aa26.7■■□□□ 1.87
CPNE1-212ENST00000430570 DNAJB7Q7Z6W7 309 aaPredicted RBP26.7■■□□□ 1.87
CPNE1-212ENST00000430570 FAM35AQ86V20 835 aa26.7■■□□□ 1.87
CPNE1-212ENST00000430570 NAP1L5Q96NT1 182 aaPredicted RBP26.7■■□□□ 1.87
CPNE1-212ENST00000430570 CORO1BQ9BR76 489 aa26.7■■□□□ 1.87
CPNE1-212ENST00000430570 FAM50BQ9Y247 325 aa26.7■■□□□ 1.87
CPNE1-212ENST00000430570 SIK3Q9Y2K2 1263 aa26.7■■□□□ 1.87
CPNE1-212ENST00000430570 GOLGA6L19H0YKK7 550 aa26.69■■□□□ 1.86
CPNE1-212ENST00000430570 CALCAP01258 141 aa26.69■■□□□ 1.86
CPNE1-212ENST00000430570 RHOP08100 348 aa26.69■■□□□ 1.86
CPNE1-212ENST00000430570 ADORA2BP29275 332 aa26.69■■□□□ 1.86
CPNE1-212ENST00000430570 GRIK1P39086 918 aa26.69■■□□□ 1.86
CPNE1-212ENST00000430570 MFAP3P55082 362 aa26.69■■□□□ 1.86
CPNE1-212ENST00000430570 MTMR3Q13615 1198 aa26.69■■□□□ 1.86
CPNE1-212ENST00000430570 PPP1R26Q5T8A7 1209 aaPredicted RBP26.69■■□□□ 1.86
CPNE1-212ENST00000430570 IQCEQ6IPM2 695 aa26.69■■□□□ 1.86
CPNE1-212ENST00000430570 ELMOD1Q8N336 334 aa26.69■■□□□ 1.86
CPNE1-212ENST00000430570 RNF214Q8ND24 703 aa26.69■■□□□ 1.86
CPNE1-212ENST00000430570 HNRNPABQ99729 332 aaKnown RBP26.69■■□□□ 1.86
CPNE1-212ENST00000430570 LRRC3Q9BY71 257 aa26.69■■□□□ 1.86
CPNE1-212ENST00000430570 RTN4Q9NQC3 1192 aaKnown RBP26.69■■□□□ 1.86
CPNE1-212ENST00000430570 CLUHO75153 1309 aa26.69■■□□□ 1.86
CPNE1-212ENST00000430570 NRG2O14511 850 aaPredicted RBP26.68■■□□□ 1.86
CPNE1-212ENST00000430570 RPL10AP62906 217 aaKnown RBP26.68■■□□□ 1.86
CPNE1-212ENST00000430570 TPM4P67936 248 aa26.68■■□□□ 1.86
CPNE1-212ENST00000430570 SYCP1Q15431 976 aa26.68■■□□□ 1.86
CPNE1-212ENST00000430570 PTPN21Q16825 1174 aa26.68■■□□□ 1.86
CPNE1-212ENST00000430570 ENOSF1Q7L5Y1 443 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms