RNA–Protein interactions for RNA: ENST00000430559.5

TNFSF13B-202, Transcript of TNF superfamily member 13b, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFSF13B, Length 2,614 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-202ENST00000430559 CCT6BQ92526 530 aa13.14□□□□□ -0.31
TNFSF13B-202ENST00000430559 RBM41Q96IZ5 413 aaKnown RBP13.14□□□□□ -0.31
TNFSF13B-202ENST00000430559 SERPINB12Q96P63 405 aa13.14□□□□□ -0.31
TNFSF13B-202ENST00000430559 SMARCAD1Q9H4L7 1026 aa13.14□□□□□ -0.31
TNFSF13B-202ENST00000430559 AKT3Q9Y243 479 aa13.14□□□□□ -0.31
TNFSF13B-202ENST00000430559 TNFSF13BQ9Y275 285 aa13.14□□□□□ -0.31
TNFSF13B-202ENST00000430559 NME7Q9Y5B8 376 aa13.14□□□□□ -0.31
TNFSF13B-202ENST00000430559 SGK1O00141 431 aa13.13□□□□□ -0.31
TNFSF13B-202ENST00000430559 CXCL11O14625 94 aa13.13□□□□□ -0.31
TNFSF13B-202ENST00000430559 HGSO14964 777 aaPredicted RBP13.13□□□□□ -0.31
TNFSF13B-202ENST00000430559 HBP1O60381 514 aa13.13□□□□□ -0.31
TNFSF13B-202ENST00000430559 CST8O60676 142 aa13.13□□□□□ -0.31
TNFSF13B-202ENST00000430559 SPAG7O75391 227 aa13.13□□□□□ -0.31
TNFSF13B-202ENST00000430559 MAP3K6O95382 1288 aa13.13□□□□□ -0.31
TNFSF13B-202ENST00000430559 SLC25A27O95847 323 aa13.13□□□□□ -0.31
TNFSF13B-202ENST00000430559 BRAFP15056 766 aa13.13□□□□□ -0.31
TNFSF13B-202ENST00000430559 AP3M2P53677 418 aa13.13□□□□□ -0.31
TNFSF13B-202ENST00000430559 VCPP55072 806 aaKnown RBP13.13□□□□□ -0.31
TNFSF13B-202ENST00000430559 SLC20A2Q08357 652 aa13.13□□□□□ -0.31
TNFSF13B-202ENST00000430559 CCDC121Q6ZUS5 278 aa13.13□□□□□ -0.31
TNFSF13B-202ENST00000430559 ILDR2Q71H61 639 aa13.13□□□□□ -0.31
TNFSF13B-202ENST00000430559 ZCCHC9Q8N567 271 aaKnown RBP13.13□□□□□ -0.31
TNFSF13B-202ENST00000430559 SPOCK2Q92563 424 aa13.13□□□□□ -0.31
TNFSF13B-202ENST00000430559 ROPN1BQ9BZX4 212 aaPredicted RBP13.13□□□□□ -0.31
TNFSF13B-202ENST00000430559 C2orf40Q9H1Z8 148 aa13.13□□□□□ -0.31
TNFSF13B-202ENST00000430559 ROPN1Q9HAT0 212 aaPredicted RBP13.13□□□□□ -0.31
TNFSF13B-202ENST00000430559 ABCF3Q9NUQ8 709 aa13.13□□□□□ -0.31
TNFSF13B-202ENST00000430559 ADCY6O43306 1168 aa13.13□□□□□ -0.31
TNFSF13B-202ENST00000430559 TJP3O95049 919 aa13.13□□□□□ -0.31
TNFSF13B-202ENST00000430559 YBX3P16989 372 aaKnown RBP eCLIP13.13□□□□□ -0.31
TNFSF13B-202ENST00000430559 HNRNPH1P31943 449 aaKnown RBP13.13□□□□□ -0.31
TNFSF13B-202ENST00000430559 PTPN11Q06124 597 aaPredicted RBP13.13□□□□□ -0.31
TNFSF13B-202ENST00000430559 C15orf59Q2T9L4 293 aaPredicted RBP13.13□□□□□ -0.31
TNFSF13B-202ENST00000430559 EAPPQ56P03 285 aaPredicted RBP13.13□□□□□ -0.31
TNFSF13B-202ENST00000430559 RNASEH2BQ5TBB1 312 aaKnown RBP13.13□□□□□ -0.31
TNFSF13B-202ENST00000430559 HSPH1Q92598 858 aa13.13□□□□□ -0.31
TNFSF13B-202ENST00000430559 MAF1Q9H063 256 aa13.13□□□□□ -0.31
TNFSF13B-202ENST00000430559 GJD2Q9UKL4 321 aa13.13□□□□□ -0.31
TNFSF13B-202ENST00000430559 GINS2Q9Y248 185 aa13.13□□□□□ -0.31
TNFSF13B-202ENST00000430559 POC1B-GALNT4F8VUJ3 575 aa13.12□□□□□ -0.31
TNFSF13B-202ENST00000430559 M0QYV0 167 aa13.12□□□□□ -0.31
TNFSF13B-202ENST00000430559 CILPO75339 1184 aa13.12□□□□□ -0.31
TNFSF13B-202ENST00000430559 PIGHQ14442 188 aaPredicted RBP13.12□□□□□ -0.31
TNFSF13B-202ENST00000430559 CGB2Q6NT52 195 aa13.12□□□□□ -0.31
TNFSF13B-202ENST00000430559 MICALCLQ6ZW33 695 aa13.12□□□□□ -0.31
TNFSF13B-202ENST00000430559 UNC45BQ8IWX7 931 aa13.12□□□□□ -0.31
TNFSF13B-202ENST00000430559 SLC35B2Q8TB61 432 aa13.12□□□□□ -0.31
TNFSF13B-202ENST00000430559 HES2Q9Y543 173 aa13.12□□□□□ -0.31
TNFSF13B-202ENST00000430559 GOLGA6L7A0A1B0GV03 622 aa13.12□□□□□ -0.31
TNFSF13B-202ENST00000430559 SIGLEC16A6NMB1 481 aa13.12□□□□□ -0.31
TNFSF13B-202ENST00000430559 MIPP30301 263 aa13.12□□□□□ -0.31
TNFSF13B-202ENST00000430559 SCTRP47872 440 aa13.12□□□□□ -0.31
TNFSF13B-202ENST00000430559 RGS7P49802 495 aa13.12□□□□□ -0.31
TNFSF13B-202ENST00000430559 PPIL2Q13356 520 aa13.12□□□□□ -0.31
TNFSF13B-202ENST00000430559 TTLL4Q14679 1199 aa13.12□□□□□ -0.31
TNFSF13B-202ENST00000430559 FNBP1LQ5T0N5 605 aa13.12□□□□□ -0.31
TNFSF13B-202ENST00000430559 CYP4V2Q6ZWL3 525 aaPredicted RBP13.12□□□□□ -0.31
TNFSF13B-202ENST00000430559 ZBED8Q8IZ13 594 aa13.12□□□□□ -0.31
TNFSF13B-202ENST00000430559 CNPY4Q8N129 248 aa13.12□□□□□ -0.31
TNFSF13B-202ENST00000430559 LINC01465Q8N7H1 131 aa13.12□□□□□ -0.31
TNFSF13B-202ENST00000430559 NIPA2Q8N8Q9 360 aa13.12□□□□□ -0.31
TNFSF13B-202ENST00000430559 THOC1Q96FV9 657 aaKnown RBP13.12□□□□□ -0.31
TNFSF13B-202ENST00000430559 MAGEB5Q9BZ81 275 aa13.12□□□□□ -0.31
TNFSF13B-202ENST00000430559 HAUS2Q9NVX0 235 aa13.12□□□□□ -0.31
TNFSF13B-202ENST00000430559 ERAP1Q9NZ08 941 aa13.12□□□□□ -0.31
TNFSF13B-202ENST00000430559 AGAP1Q9UPQ3 857 aa13.12□□□□□ -0.31
TNFSF13B-202ENST00000430559 TRIP12Q14669 1992 aaPredicted RBP13.12□□□□□ -0.31
TNFSF13B-202ENST00000430559 H0YHG0 523 aa13.11□□□□□ -0.31
TNFSF13B-202ENST00000430559 KDELR1P24390 212 aa13.11□□□□□ -0.31
TNFSF13B-202ENST00000430559 ADORA2AP29274 412 aa13.11□□□□□ -0.31
TNFSF13B-202ENST00000430559 FOXN2P32314 431 aa13.11□□□□□ -0.31
TNFSF13B-202ENST00000430559 GPD2P43304 727 aa13.11□□□□□ -0.31
TNFSF13B-202ENST00000430559 WDR4P57081 412 aaKnown RBP13.11□□□□□ -0.31
TNFSF13B-202ENST00000430559 GPX6P59796 221 aa13.11□□□□□ -0.31
TNFSF13B-202ENST00000430559 TFDP1Q14186 410 aa13.11□□□□□ -0.31
TNFSF13B-202ENST00000430559 CDO1Q16878 200 aa13.11□□□□□ -0.31
TNFSF13B-202ENST00000430559 LRRC38Q5VT99 294 aa13.11□□□□□ -0.31
TNFSF13B-202ENST00000430559 SPATS2Q86XZ4 545 aaKnown RBP13.11□□□□□ -0.31
TNFSF13B-202ENST00000430559 CCDC197Q8NCU1 140 aa13.11□□□□□ -0.31
TNFSF13B-202ENST00000430559 DYDC1Q8WWB3 177 aa13.11□□□□□ -0.31
TNFSF13B-202ENST00000430559 MAML1Q92585 1016 aa13.11□□□□□ -0.31
TNFSF13B-202ENST00000430559 PRCCQ92733 491 aaPredicted RBP13.11□□□□□ -0.31
TNFSF13B-202ENST00000430559 C16orf70Q9BSU1 422 aa13.11□□□□□ -0.31
TNFSF13B-202ENST00000430559 C12orf65Q9H3J6 166 aaKnown RBP13.11□□□□□ -0.31
TNFSF13B-202ENST00000430559 HOMER3Q9NSC5 361 aa13.11□□□□□ -0.31
TNFSF13B-202ENST00000430559 GPATCH2LQ9NWQ4 482 aa13.11□□□□□ -0.31
TNFSF13B-202ENST00000430559 GGA2Q9UJY4 613 aa13.11□□□□□ -0.31
TNFSF13B-202ENST00000430559 GRID1Q9ULK0 1009 aa13.11□□□□□ -0.31
TNFSF13B-202ENST00000430559 CLUHO75153 1309 aa13.11□□□□□ -0.31
TNFSF13B-202ENST00000430559 GAS2O43903 313 aaKnown RBP13.11□□□□□ -0.31
TNFSF13B-202ENST00000430559 TMEM63AO94886 807 aa13.11□□□□□ -0.31
TNFSF13B-202ENST00000430559 SSTR1P30872 391 aa13.11□□□□□ -0.31
TNFSF13B-202ENST00000430559 NDST1P52848 882 aa13.11□□□□□ -0.31
TNFSF13B-202ENST00000430559 YWHAEP62258 255 aaKnown RBP13.11□□□□□ -0.31
TNFSF13B-202ENST00000430559 PKN2Q16513 984 aaKnown RBP13.11□□□□□ -0.31
TNFSF13B-202ENST00000430559 CCDC142Q17RM4 750 aa13.11□□□□□ -0.31
TNFSF13B-202ENST00000430559 MARCH8Q5T0T0 291 aa13.11□□□□□ -0.31
TNFSF13B-202ENST00000430559 C9orf131Q5VYM1 1079 aa13.11□□□□□ -0.31
TNFSF13B-202ENST00000430559 NUGGCQ68CJ6 796 aa13.11□□□□□ -0.31
TNFSF13B-202ENST00000430559 TAOK1Q7L7X3 1001 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms