RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 MAPRE1Q15691 268 aaKnown RBP18.1■□□□□ 0.49
LINC00887-203ENST00000429578 PSMD5Q16401 504 aa18.1■□□□□ 0.49
LINC00887-203ENST00000429578 MDH1BQ5I0G3 518 aa18.1■□□□□ 0.49
LINC00887-203ENST00000429578 PPP2R2DQ66LE6 453 aa18.1■□□□□ 0.49
LINC00887-203ENST00000429578 PRSS55Q6UWB4 352 aaPredicted RBP18.1■□□□□ 0.49
LINC00887-203ENST00000429578 TRIM72Q6ZMU5 477 aa18.1■□□□□ 0.49
LINC00887-203ENST00000429578 PCED1BQ96HM7 432 aa18.1■□□□□ 0.49
LINC00887-203ENST00000429578 TMEM209Q96SK2 561 aa18.1■□□□□ 0.49
LINC00887-203ENST00000429578 ZCWPW1Q9H0M4 648 aa18.1■□□□□ 0.49
LINC00887-203ENST00000429578 SPTLC3Q9NUV7 552 aa18.1■□□□□ 0.49
LINC00887-203ENST00000429578 SEPT11Q9NVA2 429 aaKnown RBP18.1■□□□□ 0.49
LINC00887-203ENST00000429578 TSPAN16Q9UKR8 245 aa18.1■□□□□ 0.49
LINC00887-203ENST00000429578 BACE2Q9Y5Z0 518 aa18.1■□□□□ 0.49
LINC00887-203ENST00000429578 MTCL1Q9Y4B5 1905 aaKnown RBP18.1■□□□□ 0.49
LINC00887-203ENST00000429578 MYO9BQ13459 2157 aa18.1■□□□□ 0.49
LINC00887-203ENST00000429578 CHD9Q3L8U1 2897 aa18.1■□□□□ 0.49
LINC00887-203ENST00000429578 EIF3CLB5ME19 914 aaKnown RBP18.09■□□□□ 0.49
LINC00887-203ENST00000429578 CFHP08603 1231 aa18.09■□□□□ 0.49
LINC00887-203ENST00000429578 CCDC130P13994 396 aa18.09■□□□□ 0.49
LINC00887-203ENST00000429578 UBE3AQ05086 875 aa18.09■□□□□ 0.49
LINC00887-203ENST00000429578 SPRED2Q7Z698 418 aa18.09■□□□□ 0.49
LINC00887-203ENST00000429578 LRRTM3Q86VH5 581 aa18.09■□□□□ 0.49
LINC00887-203ENST00000429578 PALB2Q86YC2 1186 aa18.09■□□□□ 0.49
LINC00887-203ENST00000429578 DCP1BQ8IZD4 617 aaKnown RBP18.09■□□□□ 0.49
LINC00887-203ENST00000429578 FUKQ8N0W3 1084 aa18.09■□□□□ 0.49
LINC00887-203ENST00000429578 PCDHB18PQ96TA0 734 aa18.09■□□□□ 0.49
LINC00887-203ENST00000429578 EIF3CQ99613 913 aaKnown RBP18.09■□□□□ 0.49
LINC00887-203ENST00000429578 HNRNPABQ99729 332 aaKnown RBP18.09■□□□□ 0.49
LINC00887-203ENST00000429578 C11orf84Q9BUA3 381 aaPredicted RBP18.09■□□□□ 0.49
LINC00887-203ENST00000429578 ZBP1Q9H171 429 aa18.09■□□□□ 0.49
LINC00887-203ENST00000429578 ALG13Q9NP73 1137 aaKnown RBP18.09■□□□□ 0.49
LINC00887-203ENST00000429578 NAGPAQ9UK23 515 aa18.09■□□□□ 0.49
LINC00887-203ENST00000429578 MTUS1Q9ULD2 1270 aa18.09■□□□□ 0.49
LINC00887-203ENST00000429578 PRUNE2Q8WUY3 3088 aa18.09■□□□□ 0.49
LINC00887-203ENST00000429578 C2CD2LO14523 706 aa18.09■□□□□ 0.49
LINC00887-203ENST00000429578 MICAL2O94851 1124 aa18.09■□□□□ 0.49
LINC00887-203ENST00000429578 CYP1A1P04798 512 aaPredicted RBP18.09■□□□□ 0.49
LINC00887-203ENST00000429578 CTSAP10619 480 aa18.09■□□□□ 0.49
LINC00887-203ENST00000429578 SSTR3P32745 418 aaPredicted RBP18.09■□□□□ 0.49
LINC00887-203ENST00000429578 CCDC142Q17RM4 750 aa18.09■□□□□ 0.49
LINC00887-203ENST00000429578 SLC8B1Q6J4K2 584 aa18.09■□□□□ 0.49
LINC00887-203ENST00000429578 SLC2A14Q8TDB8 520 aa18.09■□□□□ 0.49
LINC00887-203ENST00000429578 LHX5Q9H2C1 402 aa18.09■□□□□ 0.49
LINC00887-203ENST00000429578 MRPL17Q9NRX2 175 aaKnown RBP18.09■□□□□ 0.49
LINC00887-203ENST00000429578 SSX2IPQ9Y2D8 614 aa18.09■□□□□ 0.49
LINC00887-203ENST00000429578 CHD7Q9P2D1 2997 aa18.08■□□□□ 0.49
LINC00887-203ENST00000429578 IPO7O95373 1038 aaKnown RBP18.08■□□□□ 0.48
LINC00887-203ENST00000429578 LSM8O95777 96 aaKnown RBP18.08■□□□□ 0.48
LINC00887-203ENST00000429578 GZMAP12544 262 aa18.08■□□□□ 0.48
LINC00887-203ENST00000429578 UNGP13051 313 aaPredicted RBP18.08■□□□□ 0.48
LINC00887-203ENST00000429578 CDH5P33151 784 aaPredicted RBP18.08■□□□□ 0.48
LINC00887-203ENST00000429578 GOLGA7BQ2TAP0 167 aa18.08■□□□□ 0.48
LINC00887-203ENST00000429578 ALKBH5Q6P6C2 394 aaKnown RBP18.08■□□□□ 0.48
LINC00887-203ENST00000429578 RSPO2Q6UXX9 243 aaPredicted RBP18.08■□□□□ 0.48
LINC00887-203ENST00000429578 PAQR9Q6ZVX9 377 aa18.08■□□□□ 0.48
LINC00887-203ENST00000429578 PASD1Q8IV76 773 aa18.08■□□□□ 0.48
LINC00887-203ENST00000429578 FBXO22Q8NEZ5 403 aa18.08■□□□□ 0.48
LINC00887-203ENST00000429578 SPPL3Q8TCT6 385 aa18.08■□□□□ 0.48
LINC00887-203ENST00000429578 B3GNT5Q9BYG0 378 aa18.08■□□□□ 0.48
LINC00887-203ENST00000429578 ZNF518BQ9C0D4 1074 aa18.08■□□□□ 0.48
LINC00887-203ENST00000429578 TMLHEQ9NVH6 421 aa18.08■□□□□ 0.48
LINC00887-203ENST00000429578 HESX1Q9UBX0 185 aa18.08■□□□□ 0.48
LINC00887-203ENST00000429578 NENFQ9UMX5 172 aa18.08■□□□□ 0.48
LINC00887-203ENST00000429578 CEP83Q9Y592 693 aa18.08■□□□□ 0.48
LINC00887-203ENST00000429578 CDY1Q9Y6F8 540 aa18.08■□□□□ 0.48
LINC00887-203ENST00000429578 PLXNA3P51805 1871 aa18.08■□□□□ 0.48
LINC00887-203ENST00000429578 GREB1Q4ZG55 1949 aa18.07■□□□□ 0.48
LINC00887-203ENST00000429578 M0QYV0 167 aa18.07■□□□□ 0.48
LINC00887-203ENST00000429578 ZNF263O14978 683 aa18.07■□□□□ 0.48
LINC00887-203ENST00000429578 OR4Q2P0C623 313 aa18.07■□□□□ 0.48
LINC00887-203ENST00000429578 ADORA2BP29275 332 aa18.07■□□□□ 0.48
LINC00887-203ENST00000429578 NOMO3P69849 1222 aa18.07■□□□□ 0.48
LINC00887-203ENST00000429578 CYP27A1Q02318 531 aa18.07■□□□□ 0.48
LINC00887-203ENST00000429578 SPA17Q15506 151 aa18.07■□□□□ 0.48
LINC00887-203ENST00000429578 NFE2Q16621 373 aaPredicted RBP18.07■□□□□ 0.48
LINC00887-203ENST00000429578 CLEC16AQ2KHT3 1053 aa18.07■□□□□ 0.48
LINC00887-203ENST00000429578 PKDCCQ504Y2 493 aa18.07■□□□□ 0.48
LINC00887-203ENST00000429578 DENND1BQ6P3S1 775 aa18.07■□□□□ 0.48
LINC00887-203ENST00000429578 C4orf50Q6ZRC1 276 aa18.07■□□□□ 0.48
LINC00887-203ENST00000429578 TOGARAM2Q6ZUX3 1019 aa18.07■□□□□ 0.48
LINC00887-203ENST00000429578 TTC30AQ86WT1 665 aa18.07■□□□□ 0.48
LINC00887-203ENST00000429578 ANKRD52Q8NB46 1076 aa18.07■□□□□ 0.48
LINC00887-203ENST00000429578 TMEM35BQ8NCS4 154 aa18.07■□□□□ 0.48
LINC00887-203ENST00000429578 POF1BQ8WVV4 589 aa18.07■□□□□ 0.48
LINC00887-203ENST00000429578 MYLPFQ96A32 169 aa18.07■□□□□ 0.48
LINC00887-203ENST00000429578 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.07■□□□□ 0.48
LINC00887-203ENST00000429578 ZNF638Q14966 1978 aaKnown RBP18.07■□□□□ 0.48
LINC00887-203ENST00000429578 COL4A4P53420 1690 aaPredicted RBP18.07■□□□□ 0.48
LINC00887-203ENST00000429578 CLDN5O00501 218 aa18.06■□□□□ 0.48
LINC00887-203ENST00000429578 LILRB3O75022 631 aa18.06■□□□□ 0.48
LINC00887-203ENST00000429578 CPB1P15086 417 aa18.06■□□□□ 0.48
LINC00887-203ENST00000429578 IGFBP4P22692 258 aa18.06■□□□□ 0.48
LINC00887-203ENST00000429578 CENPCQ03188 943 aa18.06■□□□□ 0.48
LINC00887-203ENST00000429578 SMARCB1Q12824 385 aa18.06■□□□□ 0.48
LINC00887-203ENST00000429578 GPR17Q13304 367 aa18.06■□□□□ 0.48
LINC00887-203ENST00000429578 PTPN14Q15678 1187 aa18.06■□□□□ 0.48
LINC00887-203ENST00000429578 SLC39A12Q504Y0 691 aa18.06■□□□□ 0.48
LINC00887-203ENST00000429578 CCDC122Q5T0U0 273 aa18.06■□□□□ 0.48
LINC00887-203ENST00000429578 C10orf76Q5T2E6 689 aa18.06■□□□□ 0.48
LINC00887-203ENST00000429578 WDTC1Q8N5D0 677 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms