RNA–Protein interactions for RNA: ENST00000429035.1

SDC1-204, Transcript of syndecan 1, humanhuman

TSL 3

Gene SDC1, Length 646 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-204ENST00000429035 GTF3C4Q9UKN8 822 aa15.58■□□□□ 0.08
SDC1-204ENST00000429035 MTMR6Q9Y217 621 aa15.58■□□□□ 0.08
SDC1-204ENST00000429035 KIAA1549LQ6ZVL6 1849 aa15.57■□□□□ 0.08
SDC1-204ENST00000429035 EML5Q05BV3 1969 aa15.57■□□□□ 0.08
SDC1-204ENST00000429035 DCDC2BA2VCK2 349 aa15.57■□□□□ 0.08
SDC1-204ENST00000429035 HRO43593 1189 aa15.57■□□□□ 0.08
SDC1-204ENST00000429035 TADA3O75528 432 aa15.57■□□□□ 0.08
SDC1-204ENST00000429035 F11P03951 625 aa15.57■□□□□ 0.08
SDC1-204ENST00000429035 CKMP06732 381 aa15.57■□□□□ 0.08
SDC1-204ENST00000429035 RETP07949 1114 aa15.57■□□□□ 0.08
SDC1-204ENST00000429035 WEE1P30291 646 aa15.57■□□□□ 0.08
SDC1-204ENST00000429035 PXNP49023 591 aaPredicted RBP15.57■□□□□ 0.08
SDC1-204ENST00000429035 ASIC1P78348 528 aa15.57■□□□□ 0.08
SDC1-204ENST00000429035 RBP5P82980 135 aa15.57■□□□□ 0.08
SDC1-204ENST00000429035 GRSF1Q12849 480 aaKnown RBP eCLIP15.57■□□□□ 0.08
SDC1-204ENST00000429035 CCINQ13939 588 aa15.57■□□□□ 0.08
SDC1-204ENST00000429035 PKN3Q6P5Z2 889 aa15.57■□□□□ 0.08
SDC1-204ENST00000429035 MAMSTRQ6ZN01 415 aa15.57■□□□□ 0.08
SDC1-204ENST00000429035 GLIS3Q8NEA6 775 aa15.57■□□□□ 0.08
SDC1-204ENST00000429035 RIN3Q8TB24 985 aa15.57■□□□□ 0.08
SDC1-204ENST00000429035 ACBD6Q9BR61 282 aa15.57■□□□□ 0.08
SDC1-204ENST00000429035 TDP1Q9NUW8 608 aa15.57■□□□□ 0.08
SDC1-204ENST00000429035 SIX4Q9UIU6 781 aa15.57■□□□□ 0.08
SDC1-204ENST00000429035 TRAV19A0A0A6YYK7 116 aa15.56■□□□□ 0.08
SDC1-204ENST00000429035 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.56■□□□□ 0.08
SDC1-204ENST00000429035 FRMD3A2A2Y4 597 aa15.56■□□□□ 0.08
SDC1-204ENST00000429035 CCDC192P0DO97 292 aa15.56■□□□□ 0.08
SDC1-204ENST00000429035 PCSK1P29120 753 aa15.56■□□□□ 0.08
SDC1-204ENST00000429035 IFNAR2P48551 515 aa15.56■□□□□ 0.08
SDC1-204ENST00000429035 MYO1EQ12965 1108 aa15.56■□□□□ 0.08
SDC1-204ENST00000429035 MTF1Q14872 753 aa15.56■□□□□ 0.08
SDC1-204ENST00000429035 SLC39A14Q15043 492 aa15.56■□□□□ 0.08
SDC1-204ENST00000429035 FOXD4L5Q5VV16 416 aaPredicted RBP15.56■□□□□ 0.08
SDC1-204ENST00000429035 FSTL4Q6MZW2 842 aa15.56■□□□□ 0.08
SDC1-204ENST00000429035 CBWD2Q8IUF1 395 aa15.56■□□□□ 0.08
SDC1-204ENST00000429035 TOP6BLQ8N6T0 577 aa15.56■□□□□ 0.08
SDC1-204ENST00000429035 OR5B17Q8NGF7 314 aa15.56■□□□□ 0.08
SDC1-204ENST00000429035 FOXD4L4Q8WXT5 416 aaPredicted RBP15.56■□□□□ 0.08
SDC1-204ENST00000429035 MYLPFQ96A32 169 aa15.56■□□□□ 0.08
SDC1-204ENST00000429035 DHX58Q96C10 678 aa15.56■□□□□ 0.08
SDC1-204ENST00000429035 SYT15Q9BQS2 421 aa15.56■□□□□ 0.08
SDC1-204ENST00000429035 SLC8A2Q9UPR5 921 aa15.56■□□□□ 0.08
SDC1-204ENST00000429035 PTPRJQ12913 1337 aa15.56■□□□□ 0.08
SDC1-204ENST00000429035 NCOR2Q9Y618 2525 aa15.55■□□□□ 0.08
SDC1-204ENST00000429035 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.55■□□□□ 0.08
SDC1-204ENST00000429035 STX6O43752 255 aa15.55■□□□□ 0.08
SDC1-204ENST00000429035 RNF40O75150 1001 aa15.55■□□□□ 0.08
SDC1-204ENST00000429035 NOL4O94818 638 aa15.55■□□□□ 0.08
SDC1-204ENST00000429035 PAPSS2O95340 614 aaPredicted RBP15.55■□□□□ 0.08
SDC1-204ENST00000429035 EGFP01133 1207 aa15.55■□□□□ 0.08
SDC1-204ENST00000429035 TGM1P22735 817 aa15.55■□□□□ 0.08
SDC1-204ENST00000429035 CNR2P34972 360 aa15.55■□□□□ 0.08
SDC1-204ENST00000429035 LHX1P48742 406 aa15.55■□□□□ 0.08
SDC1-204ENST00000429035 CYP27A1Q02318 531 aa15.55■□□□□ 0.08
SDC1-204ENST00000429035 PSMD2Q13200 908 aa15.55■□□□□ 0.08
SDC1-204ENST00000429035 KCNB1Q14721 858 aa15.55■□□□□ 0.08
SDC1-204ENST00000429035 C4orf50Q6ZRC1 276 aa15.55■□□□□ 0.08
SDC1-204ENST00000429035 PRR23CQ6ZRP0 262 aa15.55■□□□□ 0.08
SDC1-204ENST00000429035 MON1AQ86VX9 555 aa15.55■□□□□ 0.08
SDC1-204ENST00000429035 WDR5BQ86VZ2 330 aa15.55■□□□□ 0.08
SDC1-204ENST00000429035 SYNPOQ8N3V7 929 aa15.55■□□□□ 0.08
SDC1-204ENST00000429035 CPA6Q8N4T0 437 aa15.55■□□□□ 0.08
SDC1-204ENST00000429035 FAM160A2Q8N612 972 aaPredicted RBP15.55■□□□□ 0.08
SDC1-204ENST00000429035 HPDLQ96IR7 371 aa15.55■□□□□ 0.08
SDC1-204ENST00000429035 MMS19Q96T76 1030 aa15.55■□□□□ 0.08
SDC1-204ENST00000429035 FAM83CQ9BQN1 747 aa15.55■□□□□ 0.08
SDC1-204ENST00000429035 RTKNQ9BST9 563 aa15.55■□□□□ 0.08
SDC1-204ENST00000429035 TNMDQ9H2S6 317 aa15.55■□□□□ 0.08
SDC1-204ENST00000429035 ZSCAN16Q9H4T2 348 aaPredicted RBP15.55■□□□□ 0.08
SDC1-204ENST00000429035 ABCB6Q9NP58 842 aa15.55■□□□□ 0.08
SDC1-204ENST00000429035 SEMA4GQ9NTN9 838 aa15.55■□□□□ 0.08
SDC1-204ENST00000429035 INTS13Q9NVM9 706 aa15.55■□□□□ 0.08
SDC1-204ENST00000429035 HSPBP1Q9NZL4 362 aa15.55■□□□□ 0.08
SDC1-204ENST00000429035 WNT6Q9Y6F9 365 aa15.55■□□□□ 0.08
SDC1-204ENST00000429035 OTOL1A6NHN0 477 aaPredicted RBP15.54■□□□□ 0.08
SDC1-204ENST00000429035 ZNF233A6NK53 670 aa15.54■□□□□ 0.08
SDC1-204ENST00000429035 SPTLC2O15270 562 aa15.54■□□□□ 0.08
SDC1-204ENST00000429035 ATP2C2O75185 946 aa15.54■□□□□ 0.08
SDC1-204ENST00000429035 USP17L7P0C7H9 530 aa15.54■□□□□ 0.08
SDC1-204ENST00000429035 DLATP10515 647 aaKnown RBP15.54■□□□□ 0.08
SDC1-204ENST00000429035 ANXA13P27216 316 aa15.54■□□□□ 0.08
SDC1-204ENST00000429035 AMPD2Q01433 879 aa15.54■□□□□ 0.08
SDC1-204ENST00000429035 FAM160A1Q05DH4 1040 aa15.54■□□□□ 0.08
SDC1-204ENST00000429035 PDGFRLQ15198 375 aa15.54■□□□□ 0.08
SDC1-204ENST00000429035 CCDC6Q16204 474 aa15.54■□□□□ 0.08
SDC1-204ENST00000429035 SOWAHAQ2M3V2 549 aa15.54■□□□□ 0.08
SDC1-204ENST00000429035 FOXD4L6Q3SYB3 417 aaPredicted RBP15.54■□□□□ 0.08
SDC1-204ENST00000429035 AASDHQ4L235 1098 aaPredicted RBP15.54■□□□□ 0.08
SDC1-204ENST00000429035 TMEM196Q5HYL7 178 aa15.54■□□□□ 0.08
SDC1-204ENST00000429035 NAIF1Q69YI7 327 aaPredicted RBP15.54■□□□□ 0.08
SDC1-204ENST00000429035 FOXD4L3Q6VB84 417 aaPredicted RBP15.54■□□□□ 0.08
SDC1-204ENST00000429035 NELFCDQ8IXH7 590 aa15.54■□□□□ 0.08
SDC1-204ENST00000429035 ARL14EPQ8N8R7 260 aaPredicted RBP15.54■□□□□ 0.08
SDC1-204ENST00000429035 FSIP1Q8NA03 581 aa15.54■□□□□ 0.08
SDC1-204ENST00000429035 RDH13Q8NBN7 331 aa15.54■□□□□ 0.08
SDC1-204ENST00000429035 CXorf38Q8TB03 319 aa15.54■□□□□ 0.08
SDC1-204ENST00000429035 NETO1Q8TDF5 533 aa15.54■□□□□ 0.08
SDC1-204ENST00000429035 CHFRQ96EP1 664 aa15.54■□□□□ 0.08
SDC1-204ENST00000429035 HHIPQ96QV1 700 aa15.54■□□□□ 0.08
SDC1-204ENST00000429035 PKMYT1Q99640 499 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms