RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 SDCBP2Q9H190 292 aa14.41□□□□□ -0.1
THBS3-202ENST00000428962 PCDH9Q9HC56 1237 aa14.41□□□□□ -0.1
THBS3-202ENST00000428962 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.41□□□□□ -0.1
THBS3-202ENST00000428962 EVPLQ92817 2033 aa14.41□□□□□ -0.1
THBS3-202ENST00000428962 M0QYV0 167 aa14.41□□□□□ -0.1
THBS3-202ENST00000428962 CDH16O75309 829 aa14.41□□□□□ -0.1
THBS3-202ENST00000428962 MICAL2O94851 1124 aa14.41□□□□□ -0.1
THBS3-202ENST00000428962 VTNP04004 478 aa14.41□□□□□ -0.1
THBS3-202ENST00000428962 ZNF286BP0CG31 522 aa14.41□□□□□ -0.1
THBS3-202ENST00000428962 DRD4P21917 467 aa14.41□□□□□ -0.1
THBS3-202ENST00000428962 ARSEP51690 589 aa14.41□□□□□ -0.1
THBS3-202ENST00000428962 CDH8P55286 799 aa14.41□□□□□ -0.1
THBS3-202ENST00000428962 RBP5P82980 135 aa14.41□□□□□ -0.1
THBS3-202ENST00000428962 OASLQ15646 514 aaKnown RBP14.41□□□□□ -0.1
THBS3-202ENST00000428962 DCAF4L1Q3SXM0 396 aa14.41□□□□□ -0.1
THBS3-202ENST00000428962 PCGF5Q86SE9 256 aa14.41□□□□□ -0.1
THBS3-202ENST00000428962 CXorf38Q8TB03 319 aa14.41□□□□□ -0.1
THBS3-202ENST00000428962 CPB2Q96IY4 423 aa14.41□□□□□ -0.1
THBS3-202ENST00000428962 SEC16BQ96JE7 1060 aa14.41□□□□□ -0.1
THBS3-202ENST00000428962 CABS1Q96KC9 395 aa14.41□□□□□ -0.1
THBS3-202ENST00000428962 ACAP3Q96P50 834 aa14.41□□□□□ -0.1
THBS3-202ENST00000428962 RBM15Q96T37 977 aaKnown RBP eCLIP14.41□□□□□ -0.1
THBS3-202ENST00000428962 ELOVL4Q9GZR5 314 aa14.41□□□□□ -0.1
THBS3-202ENST00000428962 METTL5Q9NRN9 209 aaKnown RBP14.41□□□□□ -0.1
THBS3-202ENST00000428962 DNAJC17Q9NVM6 304 aaKnown RBP14.41□□□□□ -0.1
THBS3-202ENST00000428962 LGALS13Q9UHV8 139 aa14.41□□□□□ -0.1
THBS3-202ENST00000428962 KIAA1257Q9ULG3 409 aa14.41□□□□□ -0.1
THBS3-202ENST00000428962 TPX2Q9ULW0 747 aaKnown RBP14.41□□□□□ -0.1
THBS3-202ENST00000428962 SHOC2Q9UQ13 582 aa14.41□□□□□ -0.1
THBS3-202ENST00000428962 MGAMO43451 1857 aa14.4□□□□□ -0.1
THBS3-202ENST00000428962 H3BRB1 525 aa14.4□□□□□ -0.1
THBS3-202ENST00000428962 PDHXO00330 501 aa14.4□□□□□ -0.1
THBS3-202ENST00000428962 LRCH4O75427 683 aa14.4□□□□□ -0.1
THBS3-202ENST00000428962 RNF8O76064 485 aa14.4□□□□□ -0.1
THBS3-202ENST00000428962 ERBB2P04626 1255 aa14.4□□□□□ -0.1
THBS3-202ENST00000428962 GABRB2P47870 512 aa14.4□□□□□ -0.1
THBS3-202ENST00000428962 INCA1Q0VD86 236 aa14.4□□□□□ -0.1
THBS3-202ENST00000428962 STILQ15468 1287 aa14.4□□□□□ -0.1
THBS3-202ENST00000428962 CNGA2Q16280 664 aa14.4□□□□□ -0.1
THBS3-202ENST00000428962 SLC10A6Q3KNW5 377 aa14.4□□□□□ -0.1
THBS3-202ENST00000428962 GJC2Q5T442 439 aaPredicted RBP14.4□□□□□ -0.1
THBS3-202ENST00000428962 TXNRD3NBQ6F5E7 133 aa14.4□□□□□ -0.1
THBS3-202ENST00000428962 C6orf89Q6UWU4 347 aa14.4□□□□□ -0.1
THBS3-202ENST00000428962 MAMDC4Q6UXC1 1216 aa14.4□□□□□ -0.1
THBS3-202ENST00000428962 CCDC121Q6ZUS5 278 aa14.4□□□□□ -0.1
THBS3-202ENST00000428962 EXOC3L1Q86VI1 746 aa14.4□□□□□ -0.1
THBS3-202ENST00000428962 JOSD2Q8TAC2 188 aa14.4□□□□□ -0.1
THBS3-202ENST00000428962 CPXM1Q96SM3 734 aa14.4□□□□□ -0.1
THBS3-202ENST00000428962 PPP1R16BQ96T49 567 aa14.4□□□□□ -0.1
THBS3-202ENST00000428962 C16orf70Q9BSU1 422 aa14.4□□□□□ -0.1
THBS3-202ENST00000428962 TUT1Q9H6E5 874 aaKnown RBP14.4□□□□□ -0.1
THBS3-202ENST00000428962 CREBZFQ9NS37 354 aa14.4□□□□□ -0.1
THBS3-202ENST00000428962 ASNSD1Q9NWL6 643 aa14.4□□□□□ -0.1
THBS3-202ENST00000428962 CYTH4Q9UIA0 394 aa14.4□□□□□ -0.1
THBS3-202ENST00000428962 BARX2Q9UMQ3 279 aaPredicted RBP14.4□□□□□ -0.1
THBS3-202ENST00000428962 AGAP1Q9UPQ3 857 aa14.4□□□□□ -0.1
THBS3-202ENST00000428962 CEP350Q5VT06 3117 aa14.4□□□□□ -0.1
THBS3-202ENST00000428962 C3orf70A6NLC5 250 aaPredicted RBP14.39□□□□□ -0.11
THBS3-202ENST00000428962 SGK1O00141 431 aa14.39□□□□□ -0.11
THBS3-202ENST00000428962 TSPAN1O60635 241 aa14.39□□□□□ -0.11
THBS3-202ENST00000428962 ADCYAP1R1P41586 468 aa14.39□□□□□ -0.11
THBS3-202ENST00000428962 GRM5P41594 1212 aa14.39□□□□□ -0.11
THBS3-202ENST00000428962 MAGEA4P43358 317 aa14.39□□□□□ -0.11
THBS3-202ENST00000428962 GTF2A2P52657 109 aa14.39□□□□□ -0.11
THBS3-202ENST00000428962 PLCB3Q01970 1234 aa14.39□□□□□ -0.11
THBS3-202ENST00000428962 PPARDQ03181 441 aa14.39□□□□□ -0.11
THBS3-202ENST00000428962 SLC20A2Q08357 652 aa14.39□□□□□ -0.11
THBS3-202ENST00000428962 GPS1Q13098 491 aa14.39□□□□□ -0.11
THBS3-202ENST00000428962 IFT88Q13099 833 aa14.39□□□□□ -0.11
THBS3-202ENST00000428962 GRIK4Q16099 956 aa14.39□□□□□ -0.11
THBS3-202ENST00000428962 QPCTQ16769 361 aa14.39□□□□□ -0.11
THBS3-202ENST00000428962 RNF187Q5TA31 235 aaPredicted RBP14.39□□□□□ -0.11
THBS3-202ENST00000428962 BBS12Q6ZW61 710 aa14.39□□□□□ -0.11
THBS3-202ENST00000428962 MICALL1Q8N3F8 863 aa14.39□□□□□ -0.11
THBS3-202ENST00000428962 ANKS4BQ8N8V4 417 aa14.39□□□□□ -0.11
THBS3-202ENST00000428962 SLC35B2Q8TB61 432 aa14.39□□□□□ -0.11
THBS3-202ENST00000428962 DYDC1Q8WWB3 177 aa14.39□□□□□ -0.11
THBS3-202ENST00000428962 MCRS1Q96EZ8 462 aa14.39□□□□□ -0.11
THBS3-202ENST00000428962 HEXIM2Q96MH2 286 aaKnown RBP14.39□□□□□ -0.11
THBS3-202ENST00000428962 ZNF317Q96PQ6 595 aaPredicted RBP14.39□□□□□ -0.11
THBS3-202ENST00000428962 PHACTR1Q9C0D0 580 aa14.39□□□□□ -0.11
THBS3-202ENST00000428962 ZWILCHQ9H900 591 aa14.39□□□□□ -0.11
THBS3-202ENST00000428962 PPCSQ9HAB8 311 aa14.39□□□□□ -0.11
THBS3-202ENST00000428962 DPP3Q9NY33 737 aa14.39□□□□□ -0.11
THBS3-202ENST00000428962 MORF4L1Q9UBU8 362 aa14.39□□□□□ -0.11
THBS3-202ENST00000428962 HMGXB4Q9UGU5 601 aa14.39□□□□□ -0.11
THBS3-202ENST00000428962 ACTL7BQ9Y614 415 aa14.39□□□□□ -0.11
THBS3-202ENST00000428962 A0A1B0GUA9 196 aa14.38□□□□□ -0.11
THBS3-202ENST00000428962 LIG3P49916 1009 aa14.38□□□□□ -0.11
THBS3-202ENST00000428962 MYO1EQ12965 1108 aa14.38□□□□□ -0.11
THBS3-202ENST00000428962 NR1H3Q13133 447 aa14.38□□□□□ -0.11
THBS3-202ENST00000428962 TAZQ16635 292 aa14.38□□□□□ -0.11
THBS3-202ENST00000428962 TTC31Q49AM3 519 aaPredicted RBP14.38□□□□□ -0.11
THBS3-202ENST00000428962 CCDC38Q502W7 563 aa14.38□□□□□ -0.11
THBS3-202ENST00000428962 ACSF2Q96CM8 615 aaPredicted RBP14.38□□□□□ -0.11
THBS3-202ENST00000428962 TWNKQ96RR1 684 aa14.38□□□□□ -0.11
THBS3-202ENST00000428962 KATNBL1Q9H079 304 aa14.38□□□□□ -0.11
THBS3-202ENST00000428962 ACTR5Q9H9F9 607 aaPredicted RBP14.38□□□□□ -0.11
THBS3-202ENST00000428962 SAYSD1Q9NPB0 183 aa14.38□□□□□ -0.11
THBS3-202ENST00000428962 SAMD15Q9P1V8 674 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms