RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 ACO1P21399 889 aaKnown RBP23.75■■□□□ 1.39
PTPN18-205ENST00000428843 KCNQ1P51787 676 aa23.75■■□□□ 1.39
PTPN18-205ENST00000428843 RAD23BP54727 409 aa23.75■■□□□ 1.39
PTPN18-205ENST00000428843 MRPS5P82675 430 aaKnown RBP23.75■■□□□ 1.39
PTPN18-205ENST00000428843 PTCRAQ6ISU1 281 aaPredicted RBP23.75■■□□□ 1.39
PTPN18-205ENST00000428843 CYP26C1Q6V0L0 522 aa23.75■■□□□ 1.39
PTPN18-205ENST00000428843 C12orf29Q8N999 325 aa23.75■■□□□ 1.39
PTPN18-205ENST00000428843 SLC4A11Q8NBS3 891 aa23.75■■□□□ 1.39
PTPN18-205ENST00000428843 SUSD6Q92537 303 aa23.75■■□□□ 1.39
PTPN18-205ENST00000428843 TMEM176AQ96HP8 235 aa23.75■■□□□ 1.39
PTPN18-205ENST00000428843 LSM14BQ9BX40 385 aaKnown RBP23.75■■□□□ 1.39
PTPN18-205ENST00000428843 PCDHB4Q9Y5E5 795 aa23.75■■□□□ 1.39
PTPN18-205ENST00000428843 XYLBO75191 536 aa23.74■■□□□ 1.39
PTPN18-205ENST00000428843 POU2F2P09086 479 aa23.74■■□□□ 1.39
PTPN18-205ENST00000428843 TRIM21P19474 475 aaKnown RBP23.74■■□□□ 1.39
PTPN18-205ENST00000428843 BDNFP23560 247 aa23.74■■□□□ 1.39
PTPN18-205ENST00000428843 ALDH1A3P47895 512 aa23.74■■□□□ 1.39
PTPN18-205ENST00000428843 MFAP3P55082 362 aa23.74■■□□□ 1.39
PTPN18-205ENST00000428843 UBXN1Q04323 297 aa23.74■■□□□ 1.39
PTPN18-205ENST00000428843 PUS10Q3MIT2 529 aaKnown RBP23.74■■□□□ 1.39
PTPN18-205ENST00000428843 ENOSF1Q7L5Y1 443 aa23.74■■□□□ 1.39
PTPN18-205ENST00000428843 FAM81BQ96LP2 452 aa23.74■■□□□ 1.39
PTPN18-205ENST00000428843 RIPOR3Q96MK2 946 aa23.74■■□□□ 1.39
PTPN18-205ENST00000428843 DNAI2Q9GZS0 605 aa23.74■■□□□ 1.39
PTPN18-205ENST00000428843 PIDD1Q9HB75 910 aa23.74■■□□□ 1.39
PTPN18-205ENST00000428843 FAM49BQ9NUQ9 324 aa23.74■■□□□ 1.39
PTPN18-205ENST00000428843 AJAP1Q9UKB5 411 aaPredicted RBP23.74■■□□□ 1.39
PTPN18-205ENST00000428843 DOCK6Q96HP0 2047 aa23.74■■□□□ 1.39
PTPN18-205ENST00000428843 XIRP2A4UGR9 3374 aa23.73■■□□□ 1.39
PTPN18-205ENST00000428843 SLC34A2O95436 690 aa23.73■■□□□ 1.39
PTPN18-205ENST00000428843 CCDC130P13994 396 aa23.73■■□□□ 1.39
PTPN18-205ENST00000428843 MTHFRP42898 656 aa23.73■■□□□ 1.39
PTPN18-205ENST00000428843 MAGEA11P43364 429 aa23.73■■□□□ 1.39
PTPN18-205ENST00000428843 GPR15P49685 360 aa23.73■■□□□ 1.39
PTPN18-205ENST00000428843 KLK7P49862 253 aa23.73■■□□□ 1.39
PTPN18-205ENST00000428843 PLD1Q13393 1074 aa23.73■■□□□ 1.39
PTPN18-205ENST00000428843 ATAT1Q5SQI0 421 aa23.73■■□□□ 1.39
PTPN18-205ENST00000428843 TMEM270Q6UE05 265 aa23.73■■□□□ 1.39
PTPN18-205ENST00000428843 PAQR9Q6ZVX9 377 aa23.73■■□□□ 1.39
PTPN18-205ENST00000428843 RNF214Q8ND24 703 aa23.73■■□□□ 1.39
PTPN18-205ENST00000428843 JAKMIP2Q96AA8 810 aa23.73■■□□□ 1.39
PTPN18-205ENST00000428843 HEXIM2Q96MH2 286 aaKnown RBP23.73■■□□□ 1.39
PTPN18-205ENST00000428843 MED10Q9BTT4 135 aa23.73■■□□□ 1.39
PTPN18-205ENST00000428843 ZNF518BQ9C0D4 1074 aa23.73■■□□□ 1.39
PTPN18-205ENST00000428843 RTN4Q9NQC3 1192 aaKnown RBP23.73■■□□□ 1.39
PTPN18-205ENST00000428843 CEP72Q9P209 647 aa23.73■■□□□ 1.39
PTPN18-205ENST00000428843 DNAJC12Q9UKB3 198 aa23.73■■□□□ 1.39
PTPN18-205ENST00000428843 SIK3Q9Y2K2 1263 aa23.73■■□□□ 1.39
PTPN18-205ENST00000428843 RNF225M0QZC1 329 aaPredicted RBP23.72■■□□□ 1.39
PTPN18-205ENST00000428843 SERPINC1P01008 464 aa23.72■■□□□ 1.39
PTPN18-205ENST00000428843 ATF6P18850 670 aa23.72■■□□□ 1.39
PTPN18-205ENST00000428843 EPHB3P54753 998 aa23.72■■□□□ 1.39
PTPN18-205ENST00000428843 CBX2Q14781 532 aaPredicted RBP23.72■■□□□ 1.39
PTPN18-205ENST00000428843 SYCP1Q15431 976 aa23.72■■□□□ 1.39
PTPN18-205ENST00000428843 ARHGAP44Q17R89 818 aa23.72■■□□□ 1.39
PTPN18-205ENST00000428843 FILIP1LQ4L180 1135 aa23.72■■□□□ 1.39
PTPN18-205ENST00000428843 KLHDC7AQ5VTJ3 777 aa23.72■■□□□ 1.39
PTPN18-205ENST00000428843 FAM35AQ86V20 835 aa23.72■■□□□ 1.39
PTPN18-205ENST00000428843 FUKQ8N0W3 1084 aa23.72■■□□□ 1.39
PTPN18-205ENST00000428843 NAP1L5Q96NT1 182 aaPredicted RBP23.72■■□□□ 1.39
PTPN18-205ENST00000428843 ASB2Q96Q27 587 aa23.72■■□□□ 1.39
PTPN18-205ENST00000428843 ERGIC2Q96RQ1 377 aa23.72■■□□□ 1.39
PTPN18-205ENST00000428843 PLCB1Q9NQ66 1216 aa23.72■■□□□ 1.39
PTPN18-205ENST00000428843 HCFC1R1Q9NWW0 138 aa23.72■■□□□ 1.39
PTPN18-205ENST00000428843 MYH10P35580 1976 aa23.71■■□□□ 1.39
PTPN18-205ENST00000428843 DENND4AQ7Z401 1863 aa23.71■■□□□ 1.39
PTPN18-205ENST00000428843 ATP8B3O60423 1300 aa23.71■■□□□ 1.39
PTPN18-205ENST00000428843 TEX33O43247 280 aa23.71■■□□□ 1.39
PTPN18-205ENST00000428843 IL9P15248 144 aa23.71■■□□□ 1.39
PTPN18-205ENST00000428843 FANCCQ00597 558 aa23.71■■□□□ 1.39
PTPN18-205ENST00000428843 SMAD2Q15796 467 aaKnown RBP23.71■■□□□ 1.39
PTPN18-205ENST00000428843 DDR2Q16832 855 aa23.71■■□□□ 1.39
PTPN18-205ENST00000428843 SDHAF4Q5VUM1 108 aa23.71■■□□□ 1.39
PTPN18-205ENST00000428843 IQCEQ6IPM2 695 aa23.71■■□□□ 1.39
PTPN18-205ENST00000428843 VSTM1Q6UX27 236 aa23.71■■□□□ 1.39
PTPN18-205ENST00000428843 GRASPQ7Z6J2 395 aaPredicted RBP23.71■■□□□ 1.39
PTPN18-205ENST00000428843 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.71■■□□□ 1.39
PTPN18-205ENST00000428843 SCN4BQ8IWT1 228 aa23.71■■□□□ 1.39
PTPN18-205ENST00000428843 ELMOD1Q8N336 334 aa23.71■■□□□ 1.39
PTPN18-205ENST00000428843 RBBP8NLQ8NC74 664 aaPredicted RBP23.71■■□□□ 1.39
PTPN18-205ENST00000428843 SLC2A14Q8TDB8 520 aa23.71■■□□□ 1.39
PTPN18-205ENST00000428843 GPR152Q8TDT2 470 aa23.71■■□□□ 1.39
PTPN18-205ENST00000428843 GIPC2Q8TF65 315 aa23.71■■□□□ 1.39
PTPN18-205ENST00000428843 CYFIP2Q96F07 1278 aa23.71■■□□□ 1.39
PTPN18-205ENST00000428843 ZNF512Q96ME7 567 aaPredicted RBP23.71■■□□□ 1.39
PTPN18-205ENST00000428843 POMKQ9H5K3 350 aa23.71■■□□□ 1.39
PTPN18-205ENST00000428843 DNMT3BQ9UBC3 853 aaKnown RBP23.71■■□□□ 1.39
PTPN18-205ENST00000428843 CNTN6Q9UQ52 1028 aa23.71■■□□□ 1.39
PTPN18-205ENST00000428843 FAM50BQ9Y247 325 aa23.71■■□□□ 1.39
PTPN18-205ENST00000428843 FHOD1Q9Y613 1164 aa23.71■■□□□ 1.39
PTPN18-205ENST00000428843 NOTCH4Q99466 2003 aa23.71■■□□□ 1.39
PTPN18-205ENST00000428843 A0A1B0GTH6 734 aa23.7■■□□□ 1.38
PTPN18-205ENST00000428843 GRIK1P39086 918 aa23.7■■□□□ 1.38
PTPN18-205ENST00000428843 CACNA2D1P54289 1103 aa23.7■■□□□ 1.38
PTPN18-205ENST00000428843 RPL10AP62906 217 aaKnown RBP23.7■■□□□ 1.38
PTPN18-205ENST00000428843 NTHL1P78549 312 aa23.7■■□□□ 1.38
PTPN18-205ENST00000428843 PPP1R26Q5T8A7 1209 aaPredicted RBP23.7■■□□□ 1.38
PTPN18-205ENST00000428843 PCMTD1Q96MG8 357 aaPredicted RBP23.7■■□□□ 1.38
PTPN18-205ENST00000428843 NECTIN4Q96NY8 510 aa23.7■■□□□ 1.38
PTPN18-205ENST00000428843 HNRNPABQ99729 332 aaKnown RBP23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms