RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 GBP1P32455 592 aa19.7■□□□□ 0.74
UPK3BP1-201ENST00000428678 IFNAR2P48551 515 aa19.7■□□□□ 0.74
UPK3BP1-201ENST00000428678 RPL10AP62906 217 aaKnown RBP19.7■□□□□ 0.74
UPK3BP1-201ENST00000428678 DMC1Q14565 340 aa19.7■□□□□ 0.74
UPK3BP1-201ENST00000428678 SYT13Q7L8C5 426 aa19.7■□□□□ 0.74
UPK3BP1-201ENST00000428678 ATP2A3Q93084 1043 aa19.7■□□□□ 0.74
UPK3BP1-201ENST00000428678 WNT6Q9Y6F9 365 aa19.7■□□□□ 0.74
UPK3BP1-201ENST00000428678 STYXL1Q9Y6J8 313 aa19.7■□□□□ 0.74
UPK3BP1-201ENST00000428678 MYO16Q9Y6X6 1858 aa19.7■□□□□ 0.74
UPK3BP1-201ENST00000428678 NUP205Q92621 2012 aa19.69■□□□□ 0.74
UPK3BP1-201ENST00000428678 TADA3O75528 432 aa19.69■□□□□ 0.74
UPK3BP1-201ENST00000428678 IL18RAPO95256 599 aa19.69■□□□□ 0.74
UPK3BP1-201ENST00000428678 CAVIN2O95810 425 aa19.69■□□□□ 0.74
UPK3BP1-201ENST00000428678 CYP2F1P24903 491 aa19.69■□□□□ 0.74
UPK3BP1-201ENST00000428678 PNPLA4P41247 253 aa19.69■□□□□ 0.74
UPK3BP1-201ENST00000428678 NOVA1P51513 510 aaKnown RBP19.69■□□□□ 0.74
UPK3BP1-201ENST00000428678 DGKEP52429 567 aa19.69■□□□□ 0.74
UPK3BP1-201ENST00000428678 TFAMQ00059 246 aaKnown RBP19.69■□□□□ 0.74
UPK3BP1-201ENST00000428678 FAM160A1Q05DH4 1040 aa19.69■□□□□ 0.74
UPK3BP1-201ENST00000428678 ZNF77Q15935 545 aa19.69■□□□□ 0.74
UPK3BP1-201ENST00000428678 CRELD2Q6UXH1 353 aaPredicted RBP19.69■□□□□ 0.74
UPK3BP1-201ENST00000428678 PDCL2Q8N4E4 241 aa19.69■□□□□ 0.74
UPK3BP1-201ENST00000428678 LEO1Q8WVC0 666 aaPredicted RBP19.69■□□□□ 0.74
UPK3BP1-201ENST00000428678 OSCP1Q8WVF1 389 aa19.69■□□□□ 0.74
UPK3BP1-201ENST00000428678 CD101Q93033 1021 aa19.69■□□□□ 0.74
UPK3BP1-201ENST00000428678 CYP2S1Q96SQ9 504 aa19.69■□□□□ 0.74
UPK3BP1-201ENST00000428678 KIAA1549LQ6ZVL6 1849 aa19.68■□□□□ 0.74
UPK3BP1-201ENST00000428678 TRAV19A0A0A6YYK7 116 aa19.68■□□□□ 0.74
UPK3BP1-201ENST00000428678 BCLAF3A2AJT9 711 aaKnown RBP19.68■□□□□ 0.74
UPK3BP1-201ENST00000428678 HUS1O60921 280 aa19.68■□□□□ 0.74
UPK3BP1-201ENST00000428678 NOL4O94818 638 aa19.68■□□□□ 0.74
UPK3BP1-201ENST00000428678 USP17L7P0C7H9 530 aa19.68■□□□□ 0.74
UPK3BP1-201ENST00000428678 ACAT1P24752 427 aaKnown RBP19.68■□□□□ 0.74
UPK3BP1-201ENST00000428678 POLR2BP30876 1174 aaKnown RBP19.68■□□□□ 0.74
UPK3BP1-201ENST00000428678 POU5F1Q01860 360 aaKnown RBP19.68■□□□□ 0.74
UPK3BP1-201ENST00000428678 NT5DC4Q86YG4 428 aa19.68■□□□□ 0.74
UPK3BP1-201ENST00000428678 KRI1Q8N9T8 703 aaKnown RBP19.68■□□□□ 0.74
UPK3BP1-201ENST00000428678 LARP4BQ92615 738 aaKnown RBP19.68■□□□□ 0.74
UPK3BP1-201ENST00000428678 EZH1Q92800 747 aaPredicted RBP19.68■□□□□ 0.74
UPK3BP1-201ENST00000428678 TRMT2BQ96GJ1 504 aaKnown RBP19.68■□□□□ 0.74
UPK3BP1-201ENST00000428678 SLC22A12Q96S37 553 aa19.68■□□□□ 0.74
UPK3BP1-201ENST00000428678 ST6GALNAC4Q9H4F1 302 aa19.68■□□□□ 0.74
UPK3BP1-201ENST00000428678 TMEM206Q9H813 350 aa19.68■□□□□ 0.74
UPK3BP1-201ENST00000428678 ABCB6Q9NP58 842 aa19.68■□□□□ 0.74
UPK3BP1-201ENST00000428678 DDX43Q9NXZ2 648 aaKnown RBP19.68■□□□□ 0.74
UPK3BP1-201ENST00000428678 EBF1Q9UH73 591 aa19.68■□□□□ 0.74
UPK3BP1-201ENST00000428678 RALYQ9UKM9 306 aaKnown RBP19.68■□□□□ 0.74
UPK3BP1-201ENST00000428678 L1RE1Q9UN81 338 aa19.68■□□□□ 0.74
UPK3BP1-201ENST00000428678 AGAP1Q9UPQ3 857 aa19.68■□□□□ 0.74
UPK3BP1-201ENST00000428678 INVSQ9Y283 1065 aa19.68■□□□□ 0.74
UPK3BP1-201ENST00000428678 THADAQ6YHU6 1953 aa19.68■□□□□ 0.74
UPK3BP1-201ENST00000428678 C4orf47A7E2U8 309 aa19.67■□□□□ 0.74
UPK3BP1-201ENST00000428678 ITGB3P05106 788 aa19.67■□□□□ 0.74
UPK3BP1-201ENST00000428678 GJB2P29033 226 aa19.67■□□□□ 0.74
UPK3BP1-201ENST00000428678 MYL7Q01449 175 aa19.67■□□□□ 0.74
UPK3BP1-201ENST00000428678 GRIN1Q05586 938 aa19.67■□□□□ 0.74
UPK3BP1-201ENST00000428678 USP4Q13107 963 aa19.67■□□□□ 0.74
UPK3BP1-201ENST00000428678 POSTNQ15063 836 aa19.67■□□□□ 0.74
UPK3BP1-201ENST00000428678 INTS6LQ5JSJ4 861 aaKnown RBP19.67■□□□□ 0.74
UPK3BP1-201ENST00000428678 SFR1Q86XK3 245 aa19.67■□□□□ 0.74
UPK3BP1-201ENST00000428678 TSTD1Q8NFU3 115 aa19.67■□□□□ 0.74
UPK3BP1-201ENST00000428678 ACBD6Q9BR61 282 aa19.67■□□□□ 0.74
UPK3BP1-201ENST00000428678 FAM213AQ9BRX8 229 aa19.67■□□□□ 0.74
UPK3BP1-201ENST00000428678 GTF3C4Q9UKN8 822 aa19.67■□□□□ 0.74
UPK3BP1-201ENST00000428678 ANAPC1Q9H1A4 1944 aa19.66■□□□□ 0.74
UPK3BP1-201ENST00000428678 AKAP13Q12802 2813 aa19.66■□□□□ 0.74
UPK3BP1-201ENST00000428678 ASPMQ8IZT6 3477 aa19.66■□□□□ 0.74
UPK3BP1-201ENST00000428678 BAHCC1Q9P281 2608 aa19.66■□□□□ 0.74
UPK3BP1-201ENST00000428678 GON4LQ3T8J9 2241 aa19.66■□□□□ 0.74
UPK3BP1-201ENST00000428678 GIPC1O14908 333 aa19.66■□□□□ 0.74
UPK3BP1-201ENST00000428678 PROS1P07225 676 aa19.66■□□□□ 0.74
UPK3BP1-201ENST00000428678 ADSSP30520 456 aa19.66■□□□□ 0.74
UPK3BP1-201ENST00000428678 LONP1P36776 959 aaKnown RBP19.66■□□□□ 0.74
UPK3BP1-201ENST00000428678 NR1H3Q13133 447 aa19.66■□□□□ 0.74
UPK3BP1-201ENST00000428678 EML3Q32P44 896 aa19.66■□□□□ 0.74
UPK3BP1-201ENST00000428678 DAB2IPQ5VWQ8 1189 aa19.66■□□□□ 0.74
UPK3BP1-201ENST00000428678 ZNF720Q7Z2F6 126 aa19.66■□□□□ 0.74
UPK3BP1-201ENST00000428678 SCN4BQ8IWT1 228 aa19.66■□□□□ 0.74
UPK3BP1-201ENST00000428678 ARL14EPQ8N8R7 260 aaPredicted RBP19.66■□□□□ 0.74
UPK3BP1-201ENST00000428678 C1orf127Q8N9H9 656 aa19.66■□□□□ 0.74
UPK3BP1-201ENST00000428678 SH3RF2Q8TEC5 729 aa19.66■□□□□ 0.74
UPK3BP1-201ENST00000428678 HVCN1Q96D96 273 aa19.66■□□□□ 0.74
UPK3BP1-201ENST00000428678 MYRFLQ96LU7 910 aa19.66■□□□□ 0.74
UPK3BP1-201ENST00000428678 TPSD1Q9BZJ3 242 aa19.66■□□□□ 0.74
UPK3BP1-201ENST00000428678 LNP1A1A4G5 178 aa19.65■□□□□ 0.74
UPK3BP1-201ENST00000428678 SEC13P55735 322 aa19.65■□□□□ 0.74
UPK3BP1-201ENST00000428678 WNT7BP56706 349 aa19.65■□□□□ 0.74
UPK3BP1-201ENST00000428678 ZNF252P-AS1Q0IIN9 211 aa19.65■□□□□ 0.74
UPK3BP1-201ENST00000428678 KCNB1Q14721 858 aa19.65■□□□□ 0.74
UPK3BP1-201ENST00000428678 CCDC142Q17RM4 750 aa19.65■□□□□ 0.74
UPK3BP1-201ENST00000428678 USP39Q53GS9 565 aaKnown RBP19.65■□□□□ 0.74
UPK3BP1-201ENST00000428678 DYMQ7RTS9 669 aa19.65■□□□□ 0.74
UPK3BP1-201ENST00000428678 SPATA2LQ8IUW3 424 aaPredicted RBP19.65■□□□□ 0.74
UPK3BP1-201ENST00000428678 TMEM86AQ8N2M4 240 aa19.65■□□□□ 0.74
UPK3BP1-201ENST00000428678 FSIP1Q8NA03 581 aa19.65■□□□□ 0.74
UPK3BP1-201ENST00000428678 CCDC26Q8TAB7 109 aa19.65■□□□□ 0.74
UPK3BP1-201ENST00000428678 CACTINQ8WUQ7 758 aaKnown RBP19.65■□□□□ 0.74
UPK3BP1-201ENST00000428678 SAAL1Q96ER3 474 aa19.65■□□□□ 0.74
UPK3BP1-201ENST00000428678 SPEGQ15772 3267 aa19.64■□□□□ 0.73
UPK3BP1-201ENST00000428678 C2orf78A6NCI8 922 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms