RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 PFDN1O60925 122 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 HAUS5O94927 633 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 ZBED1O96006 694 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 ITGAVP06756 1048 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 KRT13P13646 458 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 ETS2P15036 469 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 ZFXP17010 805 aaPredicted RBP5.39□□□□□ -1.55
RIF1-203ENST00000428287 HDAC4P56524 1084 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 KCNC4Q03721 635 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 KCNA1Q09470 495 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 ENOX2Q16206 610 aaKnown RBP5.39□□□□□ -1.55
RIF1-203ENST00000428287 SLC10A5Q5PT55 438 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 METTL21CQ5VZV1 264 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 SEPT14Q6ZU15 432 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 HEATR3Q7Z4Q2 680 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 TCP10LQ8TDR4 215 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 SIKE1Q9BRV8 207 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 PSMC3IPQ9P2W1 217 aaPredicted RBP5.39□□□□□ -1.55
RIF1-203ENST00000428287 DNAJC12Q9UKB3 198 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 ATF5Q9Y2D1 282 aaPredicted RBP5.39□□□□□ -1.55
RIF1-203ENST00000428287 KIAA1671Q9BY89 1806 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 CFAP69A5D8W1 941 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 ATMINO43313 823 aaPredicted RBP5.39□□□□□ -1.55
RIF1-203ENST00000428287 SNNO75324 88 aaPredicted RBP5.39□□□□□ -1.55
RIF1-203ENST00000428287 HNRNPCP07910 306 aaKnown RBP eCLIP5.39□□□□□ -1.555e-6■■■□□ 16.4
RIF1-203ENST00000428287 PSMC2P35998 433 aaKnown RBP5.39□□□□□ -1.55
RIF1-203ENST00000428287 NR1H2P55055 460 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 BFSP1Q12934 665 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 RINT1Q6NUQ1 792 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 C16orf86Q6ZW13 317 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 CATSPER3Q86XQ3 398 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 FAM186BQ8IYM0 893 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 METTL25Q8N6Q8 603 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 ANKRD42Q8N9B4 389 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 UHMK1Q8TAS1 419 aaKnown RBP5.39□□□□□ -1.55
RIF1-203ENST00000428287 SLC35B2Q8TB61 432 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 GRK7Q8WTQ7 553 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 CCT7Q99832 543 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 TBK1Q9UHD2 729 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 VPS28Q9UK41 221 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 ADAM23O75077 832 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 ALOX15P16050 662 aaPredicted RBP5.39□□□□□ -1.55
RIF1-203ENST00000428287 ZNF26P17031 533 aaPredicted RBP5.39□□□□□ -1.55
RIF1-203ENST00000428287 DYNLL1P63167 89 aaKnown RBP5.39□□□□□ -1.55
RIF1-203ENST00000428287 FMO1Q01740 532 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 MECOMQ03112 1051 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 EFTUD2Q15029 972 aaKnown RBP eCLIP5.39□□□□□ -1.553e-8■■■■□ 19.9
RIF1-203ENST00000428287 SLC44A4Q53GD3 710 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 GPATCH4Q5T3I0 446 aaKnown RBP5.39□□□□□ -1.55
RIF1-203ENST00000428287 CCDC62Q6P9F0 684 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 ELMSAN1Q6PJG2 1045 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 CLEC4GQ6UXB4 293 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 KATNAL2Q8IYT4 538 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 PQLC1Q8N2U9 271 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 ACTRT2Q8TDY3 377 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 SPIRE2Q8WWL2 714 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 CDK5RAP3Q96JB5 506 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.39□□□□□ -1.552e-8■■■■■ 177.7
RIF1-203ENST00000428287 POMPQ9Y244 141 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 CHD3Q12873 2000 aaKnown RBP5.39□□□□□ -1.55
RIF1-203ENST00000428287 POTEB3A0JP26 581 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 FAM155AB1AL88 458 aaPredicted RBP5.39□□□□□ -1.55
RIF1-203ENST00000428287 SERPINA6P08185 405 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 ADRA1DP25100 572 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 HOXD12P35452 270 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 TUBA4AP68366 448 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 PTPROQ16827 1216 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 NADK2Q4G0N4 442 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 LVRNQ6Q4G3 990 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 POTEBQ6S5H4 581 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 HGH1Q9BTY7 390 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 TSSK1BQ9BXA7 367 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 DHX33Q9H6R0 707 aaKnown RBP5.39□□□□□ -1.55
RIF1-203ENST00000428287 S100A14Q9HCY8 104 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 MINPP1Q9UNW1 487 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 R3HDM2Q9Y2K5 976 aaKnown RBP5.39□□□□□ -1.55
RIF1-203ENST00000428287 C15orf38-AP3S2A0A0A6YYH1 394 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 DKC1O60832 514 aaKnown RBP eCLIP5.39□□□□□ -1.55
RIF1-203ENST00000428287 STIP1P31948 543 aaKnown RBP5.39□□□□□ -1.55
RIF1-203ENST00000428287 PSMD8P48556 350 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 THOC5Q13769 683 aaKnown RBP5.39□□□□□ -1.55
RIF1-203ENST00000428287 FASTKD3Q14CZ7 662 aaKnown RBP5.39□□□□□ -1.55
RIF1-203ENST00000428287 TLR1Q15399 786 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 KCTD19Q17RG1 926 aaPredicted RBP5.39□□□□□ -1.55
RIF1-203ENST00000428287 RNASEH2BQ5TBB1 312 aaKnown RBP5.39□□□□□ -1.55
RIF1-203ENST00000428287 SEL1L2Q5TEA6 688 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 ZFP1Q6P2D0 407 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 POTEHQ6S545 545 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 NCCRP1Q6ZVX7 275 aaPredicted RBP5.39□□□□□ -1.55
RIF1-203ENST00000428287 ARPINQ7Z6K5 226 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 DAW1Q8N136 415 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 DDI1Q8WTU0 396 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 P2RX7Q99572 595 aaKnown RBP5.39□□□□□ -1.55
RIF1-203ENST00000428287 REEP2Q9BRK0 252 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 SLC38A7Q9NVC3 462 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 PSMD13Q9UNM6 376 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 DMTF1Q9Y222 760 aa5.39□□□□□ -1.55
RIF1-203ENST00000428287 FAM32AQ9Y421 112 aaKnown RBP5.39□□□□□ -1.55
RIF1-203ENST00000428287 PCNX2A6NKB5 2137 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 A0A0B4J269 797 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms