RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 ELMOD1Q8N336 334 aa16.09■□□□□ 0.17
VARS2-203ENST00000428017 C12orf29Q8N999 325 aa16.09■□□□□ 0.17
VARS2-203ENST00000428017 SLC2A14Q8TDB8 520 aa16.09■□□□□ 0.17
VARS2-203ENST00000428017 HLA-CQ95604 372 aa16.09■□□□□ 0.17
VARS2-203ENST00000428017 IQCDQ96DY2 449 aa16.09■□□□□ 0.17
VARS2-203ENST00000428017 LPIN3Q9BQK8 851 aa16.09■□□□□ 0.17
VARS2-203ENST00000428017 NAA15Q9BXJ9 866 aaKnown RBP16.09■□□□□ 0.17
VARS2-203ENST00000428017 B3GNT5Q9BYG0 378 aa16.09■□□□□ 0.17
VARS2-203ENST00000428017 ZDHHC7Q9NXF8 308 aa16.09■□□□□ 0.17
VARS2-203ENST00000428017 AJAP1Q9UKB5 411 aaPredicted RBP16.09■□□□□ 0.17
VARS2-203ENST00000428017 INSL5Q9Y5Q6 135 aa16.09■□□□□ 0.17
VARS2-203ENST00000428017 VWA8A3KMH1 1905 aa16.09■□□□□ 0.17
VARS2-203ENST00000428017 TSC2P49815 1807 aa16.08■□□□□ 0.17
VARS2-203ENST00000428017 F8VZ95 297 aa16.08■□□□□ 0.16
VARS2-203ENST00000428017 FOXN3O00409 490 aaPredicted RBP16.08■□□□□ 0.16
VARS2-203ENST00000428017 EPHB6O15197 1021 aa16.08■□□□□ 0.16
VARS2-203ENST00000428017 XYLBO75191 536 aa16.08■□□□□ 0.16
VARS2-203ENST00000428017 SEC24AO95486 1093 aa16.08■□□□□ 0.16
VARS2-203ENST00000428017 HNRNPA1P09651 372 aaKnown RBP eCLIP16.08■□□□□ 0.16
VARS2-203ENST00000428017 HAPLN1P10915 354 aaPredicted RBP16.08■□□□□ 0.16
VARS2-203ENST00000428017 BDNFP23560 247 aa16.08■□□□□ 0.16
VARS2-203ENST00000428017 CYP2F1P24903 491 aa16.08■□□□□ 0.16
VARS2-203ENST00000428017 ANXA13P27216 316 aa16.08■□□□□ 0.16
VARS2-203ENST00000428017 ADORA2BP29275 332 aa16.08■□□□□ 0.16
VARS2-203ENST00000428017 GRIK1P39086 918 aa16.08■□□□□ 0.16
VARS2-203ENST00000428017 STAT1P42224 750 aa16.08■□□□□ 0.16
VARS2-203ENST00000428017 MAGEA11P43364 429 aa16.08■□□□□ 0.16
VARS2-203ENST00000428017 ZNF132P52740 706 aa16.08■□□□□ 0.16
VARS2-203ENST00000428017 EPHB3P54753 998 aa16.08■□□□□ 0.16
VARS2-203ENST00000428017 PTK2Q05397 1052 aa16.08■□□□□ 0.16
VARS2-203ENST00000428017 TWF1Q12792 350 aa16.08■□□□□ 0.16
VARS2-203ENST00000428017 VEPH1Q14D04 833 aa16.08■□□□□ 0.16
VARS2-203ENST00000428017 STILQ15468 1287 aa16.08■□□□□ 0.16
VARS2-203ENST00000428017 TAF12Q16514 161 aa16.08■□□□□ 0.16
VARS2-203ENST00000428017 CTC1Q2NKJ3 1217 aa16.08■□□□□ 0.16
VARS2-203ENST00000428017 VSTM1Q6UX27 236 aa16.08■□□□□ 0.16
VARS2-203ENST00000428017 FMNL3Q8IVF7 1028 aa16.08■□□□□ 0.16
VARS2-203ENST00000428017 SCN4BQ8IWT1 228 aa16.08■□□□□ 0.16
VARS2-203ENST00000428017 ZNF397Q8NF99 534 aaPredicted RBP16.08■□□□□ 0.16
VARS2-203ENST00000428017 SMARCD1Q96GM5 515 aa16.08■□□□□ 0.16
VARS2-203ENST00000428017 HNRNPABQ99729 332 aaKnown RBP16.08■□□□□ 0.16
VARS2-203ENST00000428017 ZNF518BQ9C0D4 1074 aa16.08■□□□□ 0.16
VARS2-203ENST00000428017 PIDD1Q9HB75 910 aa16.08■□□□□ 0.16
VARS2-203ENST00000428017 KRT82Q9NSB4 513 aa16.08■□□□□ 0.16
VARS2-203ENST00000428017 HESX1Q9UBX0 185 aa16.08■□□□□ 0.16
VARS2-203ENST00000428017 CNTN6Q9UQ52 1028 aa16.08■□□□□ 0.16
VARS2-203ENST00000428017 YIPF1Q9Y548 306 aa16.08■□□□□ 0.16
VARS2-203ENST00000428017 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.08■□□□□ 0.162e-6■■□□□ 13.1
VARS2-203ENST00000428017 CHD7Q9P2D1 2997 aa16.07■□□□□ 0.16
VARS2-203ENST00000428017 CLDN5O00501 218 aa16.07■□□□□ 0.16
VARS2-203ENST00000428017 TRIM66O15016 1216 aa16.07■□□□□ 0.16
VARS2-203ENST00000428017 CYP26A1O43174 497 aa16.07■□□□□ 0.16
VARS2-203ENST00000428017 MED7O43513 233 aa16.07■□□□□ 0.16
VARS2-203ENST00000428017 TBX10O75333 385 aa16.07■□□□□ 0.16
VARS2-203ENST00000428017 RFPL2O75678 378 aa16.07■□□□□ 0.16
VARS2-203ENST00000428017 TPM1P09493 284 aa16.07■□□□□ 0.16
VARS2-203ENST00000428017 CCDC172P0C7W6 258 aa16.07■□□□□ 0.16
VARS2-203ENST00000428017 FAM200BP0CF97 657 aa16.07■□□□□ 0.16
VARS2-203ENST00000428017 KCNA5P22460 613 aa16.07■□□□□ 0.16
VARS2-203ENST00000428017 GNA15P30679 374 aa16.07■□□□□ 0.16
VARS2-203ENST00000428017 HOXA9P31269 272 aa16.07■□□□□ 0.16
VARS2-203ENST00000428017 COL19A1Q14993 1142 aa16.07■□□□□ 0.16
VARS2-203ENST00000428017 RARS2Q5T160 578 aaKnown RBP16.07■□□□□ 0.16
VARS2-203ENST00000428017 SPECC1LQ69YQ0 1117 aa16.07■□□□□ 0.16
VARS2-203ENST00000428017 CES5AQ6NT32 575 aa16.07■□□□□ 0.16
VARS2-203ENST00000428017 TMC5Q6UXY8 1006 aa16.07■□□□□ 0.16
VARS2-203ENST00000428017 FAM35AQ86V20 835 aa16.07■□□□□ 0.16
VARS2-203ENST00000428017 FAM71AQ8IYT1 594 aa16.07■□□□□ 0.16
VARS2-203ENST00000428017 FUKQ8N0W3 1084 aa16.07■□□□□ 0.16
VARS2-203ENST00000428017 C12orf76Q8N812 135 aaPredicted RBP16.07■□□□□ 0.16
VARS2-203ENST00000428017 RHOBTB2Q9BYZ6 727 aa16.07■□□□□ 0.16
VARS2-203ENST00000428017 EDEM3Q9BZQ6 932 aa16.07■□□□□ 0.16
VARS2-203ENST00000428017 CRISPLD1Q9H336 500 aa16.07■□□□□ 0.16
VARS2-203ENST00000428017 UBE2ZQ9H832 354 aaPredicted RBP16.07■□□□□ 0.16
VARS2-203ENST00000428017 CLEC1BQ9P126 229 aa16.07■□□□□ 0.16
VARS2-203ENST00000428017 COG5Q9UP83 839 aa16.07■□□□□ 0.16
VARS2-203ENST00000428017 ITIH6Q6UXX5 1313 aa16.07■□□□□ 0.16
VARS2-203ENST00000428017 CCDC195A0A1B0GUA6 201 aa16.06■□□□□ 0.16
VARS2-203ENST00000428017 RNF225M0QZC1 329 aaPredicted RBP16.06■□□□□ 0.16
VARS2-203ENST00000428017 CCL16O15467 120 aa16.06■□□□□ 0.16
VARS2-203ENST00000428017 THAP12O43422 761 aa16.06■□□□□ 0.16
VARS2-203ENST00000428017 AP1G2O75843 785 aa16.06■□□□□ 0.16
VARS2-203ENST00000428017 SOAT2O75908 522 aa16.06■□□□□ 0.16
VARS2-203ENST00000428017 VNN2O95498 520 aa16.06■□□□□ 0.16
VARS2-203ENST00000428017 PNMA6AP0CW24 399 aaPredicted RBP16.06■□□□□ 0.16
VARS2-203ENST00000428017 BRD2P25440 801 aaKnown RBP16.06■□□□□ 0.16
VARS2-203ENST00000428017 SOX5P35711 763 aa16.06■□□□□ 0.16
VARS2-203ENST00000428017 PBX1P40424 430 aa16.06■□□□□ 0.16
VARS2-203ENST00000428017 PDE6CP51160 858 aa16.06■□□□□ 0.16
VARS2-203ENST00000428017 GOLGA7BQ2TAP0 167 aa16.06■□□□□ 0.16
VARS2-203ENST00000428017 FIGNQ5HY92 759 aa16.06■□□□□ 0.16
VARS2-203ENST00000428017 PPP1R26Q5T8A7 1209 aaPredicted RBP16.06■□□□□ 0.16
VARS2-203ENST00000428017 ARHGAP17Q68EM7 881 aa16.06■□□□□ 0.16
VARS2-203ENST00000428017 ITIH5Q86UX2 942 aa16.06■□□□□ 0.16
VARS2-203ENST00000428017 TTC9BQ8N6N2 239 aa16.06■□□□□ 0.16
VARS2-203ENST00000428017 CMASQ8NFW8 434 aaPredicted RBP16.06■□□□□ 0.16
VARS2-203ENST00000428017 ZNF512Q96ME7 567 aaPredicted RBP16.06■□□□□ 0.16
VARS2-203ENST00000428017 APOL5Q9BWW9 433 aa16.06■□□□□ 0.16
VARS2-203ENST00000428017 PRKD2Q9BZL6 878 aa16.06■□□□□ 0.16
VARS2-203ENST00000428017 PDCL3Q9H2J4 239 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms