RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 CCDC173Q0VFZ6 552 aa9.98□□□□□ -0.81
LSG1-202ENST00000427461 SCRN1Q12765 414 aa9.98□□□□□ -0.81
LSG1-202ENST00000427461 VEPH1Q14D04 833 aa9.98□□□□□ -0.81
LSG1-202ENST00000427461 TAF12Q16514 161 aa9.98□□□□□ -0.81
LSG1-202ENST00000427461 TTC22Q5TAA0 569 aa9.98□□□□□ -0.81
LSG1-202ENST00000427461 ATF7IP2Q5U623 682 aa9.98□□□□□ -0.81
LSG1-202ENST00000427461 SLC36A4Q6YBV0 504 aa9.98□□□□□ -0.81
LSG1-202ENST00000427461 SPIRE2Q8WWL2 714 aa9.98□□□□□ -0.81
LSG1-202ENST00000427461 ATP2A3Q93084 1043 aa9.98□□□□□ -0.81
LSG1-202ENST00000427461 NXPE2Q96DL1 559 aa9.98□□□□□ -0.81
LSG1-202ENST00000427461 CCDC43Q96MW1 224 aaKnown RBP9.98□□□□□ -0.81
LSG1-202ENST00000427461 CYP2S1Q96SQ9 504 aa9.98□□□□□ -0.81
LSG1-202ENST00000427461 EIF2AK1Q9BQI3 630 aaKnown RBP9.98□□□□□ -0.81
LSG1-202ENST00000427461 LSG1Q9H089 658 aaKnown RBP9.98□□□□□ -0.81
LSG1-202ENST00000427461 C2orf40Q9H1Z8 148 aa9.98□□□□□ -0.81
LSG1-202ENST00000427461 GAREM1Q9H706 876 aa9.98□□□□□ -0.81
LSG1-202ENST00000427461 POLD4Q9HCU8 107 aa9.98□□□□□ -0.81
LSG1-202ENST00000427461 ANKEF1Q9NU02 776 aa9.98□□□□□ -0.81
LSG1-202ENST00000427461 CALCOCO1Q9P1Z2 691 aa9.98□□□□□ -0.81
LSG1-202ENST00000427461 AK5Q9Y6K8 562 aa9.98□□□□□ -0.81
LSG1-202ENST00000427461 NID2Q14112 1375 aa9.98□□□□□ -0.81
LSG1-202ENST00000427461 ANK1P16157 1881 aa9.98□□□□□ -0.81
LSG1-202ENST00000427461 OR6C75A6NL08 312 aa9.97□□□□□ -0.81
LSG1-202ENST00000427461 E9PAM4 449 aa9.97□□□□□ -0.81
LSG1-202ENST00000427461 CILPO75339 1184 aa9.97□□□□□ -0.81
LSG1-202ENST00000427461 IGHDP01880 384 aa9.97□□□□□ -0.81
LSG1-202ENST00000427461 KCNE1P15382 129 aa9.97□□□□□ -0.81
LSG1-202ENST00000427461 HMGA1P17096 107 aaKnown RBP9.97□□□□□ -0.81
LSG1-202ENST00000427461 IL12RB1P42701 662 aa9.97□□□□□ -0.81
LSG1-202ENST00000427461 BNC1Q01954 994 aa9.97□□□□□ -0.81
LSG1-202ENST00000427461 NR1H3Q13133 447 aa9.97□□□□□ -0.81
LSG1-202ENST00000427461 DMP1Q13316 513 aaPredicted RBP9.97□□□□□ -0.81
LSG1-202ENST00000427461 NECTIN1Q15223 517 aa9.97□□□□□ -0.81
LSG1-202ENST00000427461 PTPRNQ16849 979 aa9.97□□□□□ -0.81
LSG1-202ENST00000427461 ZC2HC1CQ53FD0 456 aaPredicted RBP9.97□□□□□ -0.81
LSG1-202ENST00000427461 EOGTQ5NDL2 527 aa9.97□□□□□ -0.81
LSG1-202ENST00000427461 DBX2Q6ZNG2 339 aa9.97□□□□□ -0.81
LSG1-202ENST00000427461 PRICKLE2Q7Z3G6 844 aa9.97□□□□□ -0.81
LSG1-202ENST00000427461 USP37Q86T82 979 aa9.97□□□□□ -0.81
LSG1-202ENST00000427461 MON1AQ86VX9 555 aa9.97□□□□□ -0.81
LSG1-202ENST00000427461 SPACA3Q8IXA5 215 aa9.97□□□□□ -0.81
LSG1-202ENST00000427461 CDC6Q99741 560 aa9.97□□□□□ -0.81
LSG1-202ENST00000427461 PI4K2AQ9BTU6 479 aa9.97□□□□□ -0.81
LSG1-202ENST00000427461 CCDC94Q9BW85 323 aaPredicted RBP9.97□□□□□ -0.81
LSG1-202ENST00000427461 SLC26A6Q9BXS9 759 aa9.97□□□□□ -0.81
LSG1-202ENST00000427461 C22orf23Q9BZE7 217 aa9.97□□□□□ -0.81
LSG1-202ENST00000427461 CDT1Q9H211 546 aa9.97□□□□□ -0.81
LSG1-202ENST00000427461 FAM124BQ9H5Z6 455 aaPredicted RBP9.97□□□□□ -0.81
LSG1-202ENST00000427461 TOPORSQ9NS56 1045 aaPredicted RBP9.97□□□□□ -0.81
LSG1-202ENST00000427461 NXF1Q9UBU9 619 aaKnown RBP9.97□□□□□ -0.81
LSG1-202ENST00000427461 IL17BQ9UHF5 180 aa9.97□□□□□ -0.81
LSG1-202ENST00000427461 PCDHA4Q9UN74 947 aa9.97□□□□□ -0.81
LSG1-202ENST00000427461 CYP8B1Q9UNU6 501 aa9.97□□□□□ -0.81
LSG1-202ENST00000427461 MYLKQ15746 1914 aa9.96□□□□□ -0.81
LSG1-202ENST00000427461 UBR5O95071 2799 aaPredicted RBP9.96□□□□□ -0.81
LSG1-202ENST00000427461 MYOFQ9NZM1 2061 aa9.96□□□□□ -0.81
LSG1-202ENST00000427461 TADA3O75528 432 aa9.96□□□□□ -0.82
LSG1-202ENST00000427461 LYPLA2O95372 231 aa9.96□□□□□ -0.82
LSG1-202ENST00000427461 PYGBP11216 843 aa9.96□□□□□ -0.82
LSG1-202ENST00000427461 ATP2B1P20020 1258 aa9.96□□□□□ -0.82
LSG1-202ENST00000427461 KIR2DL1P43626 348 aaPredicted RBP9.96□□□□□ -0.82
LSG1-202ENST00000427461 AKAP17AQ02040 695 aaKnown RBP9.96□□□□□ -0.82
LSG1-202ENST00000427461 FAM160A1Q05DH4 1040 aa9.96□□□□□ -0.82
LSG1-202ENST00000427461 SPAG1Q07617 926 aa9.96□□□□□ -0.82
LSG1-202ENST00000427461 USP4Q13107 963 aa9.96□□□□□ -0.82
LSG1-202ENST00000427461 MYBPC2Q14324 1141 aa9.96□□□□□ -0.82
LSG1-202ENST00000427461 ZNF268Q14587 947 aaPredicted RBP9.96□□□□□ -0.82
LSG1-202ENST00000427461 NPY5RQ15761 445 aa9.96□□□□□ -0.82
LSG1-202ENST00000427461 NTRK3Q16288 839 aa9.96□□□□□ -0.82
LSG1-202ENST00000427461 SLC39A12Q504Y0 691 aa9.96□□□□□ -0.82
LSG1-202ENST00000427461 OVOS1Q6IE37 1185 aa9.96□□□□□ -0.82
LSG1-202ENST00000427461 BLIDQ8IZY5 108 aa9.96□□□□□ -0.82
LSG1-202ENST00000427461 OR10T2Q8NGX3 314 aa9.96□□□□□ -0.82
LSG1-202ENST00000427461 SNIP1Q8TAD8 396 aaKnown RBP9.96□□□□□ -0.82
LSG1-202ENST00000427461 DEPTORQ8TB45 409 aa9.96□□□□□ -0.82
LSG1-202ENST00000427461 BAP1Q92560 729 aa9.96□□□□□ -0.82
LSG1-202ENST00000427461 ZNF419Q96HQ0 510 aaPredicted RBP9.96□□□□□ -0.82
LSG1-202ENST00000427461 YTHDC1Q96MU7 727 aaKnown RBP9.96□□□□□ -0.82
LSG1-202ENST00000427461 HSD17B14Q9BPX1 270 aa9.96□□□□□ -0.82
LSG1-202ENST00000427461 ZDHHC5Q9C0B5 715 aa9.96□□□□□ -0.82
LSG1-202ENST00000427461 CPNE5Q9HCH3 593 aa9.96□□□□□ -0.82
LSG1-202ENST00000427461 TRPC7Q9HCX4 862 aa9.96□□□□□ -0.82
LSG1-202ENST00000427461 GMIPQ9P107 970 aa9.96□□□□□ -0.82
LSG1-202ENST00000427461 CNTN3Q9P232 1028 aa9.96□□□□□ -0.82
LSG1-202ENST00000427461 ZMYM5Q9UJ78 669 aa9.96□□□□□ -0.82
LSG1-202ENST00000427461 MAGED2Q9UNF1 606 aaPredicted RBP9.96□□□□□ -0.82
LSG1-202ENST00000427461 KNTC1P50748 2209 aa9.96□□□□□ -0.82
LSG1-202ENST00000427461 TMEM131Q92545 1883 aa9.96□□□□□ -0.82
LSG1-202ENST00000427461 MYO9AB2RTY4 2548 aa9.95□□□□□ -0.82
LSG1-202ENST00000427461 FLRT2O43155 660 aa9.95□□□□□ -0.82
LSG1-202ENST00000427461 GNSP15586 552 aa9.95□□□□□ -0.82
LSG1-202ENST00000427461 DDX6P26196 483 aaKnown RBP eCLIP9.95□□□□□ -0.82
LSG1-202ENST00000427461 MATKP42679 507 aa9.95□□□□□ -0.82
LSG1-202ENST00000427461 WASP42768 502 aa9.95□□□□□ -0.82
LSG1-202ENST00000427461 TUFMP49411 452 aaKnown RBP9.95□□□□□ -0.82
LSG1-202ENST00000427461 GPR15P49685 360 aa9.95□□□□□ -0.82
LSG1-202ENST00000427461 KCNH2Q12809 1159 aa9.95□□□□□ -0.82
LSG1-202ENST00000427461 HLA-BQ31612 363 aa9.95□□□□□ -0.82
LSG1-202ENST00000427461 ADCK5Q3MIX3 580 aa9.95□□□□□ -0.82
LSG1-202ENST00000427461 PREPLQ4J6C6 727 aaPredicted RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms