RNA–Protein interactions for RNA: ENST00000427183.6

HDLBP-214, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2 BASIC

Gene HDLBP, Length 6,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-214ENST00000427183 WWOXQ9NZC7 414 aa13.04□□□□□ -0.32
HDLBP-214ENST00000427183 POLG2Q9UHN1 485 aa13.04□□□□□ -0.32
HDLBP-214ENST00000427183 FEM1BQ9UK73 627 aa13.04□□□□□ -0.32
HDLBP-214ENST00000427183 CRKP46108 304 aa13.03□□□□□ -0.32
HDLBP-214ENST00000427183 SGSM1Q2NKQ1 1148 aa13.03□□□□□ -0.32
HDLBP-214ENST00000427183 KCTD21Q4G0X4 260 aa13.03□□□□□ -0.32
HDLBP-214ENST00000427183 CCDC157Q569K6 752 aa13.03□□□□□ -0.32
HDLBP-214ENST00000427183 LRRC8DQ7L1W4 858 aa13.03□□□□□ -0.32
HDLBP-214ENST00000427183 CCDC33Q8N5R6 958 aa13.03□□□□□ -0.32
HDLBP-214ENST00000427183 ZNF669Q96BR6 464 aaPredicted RBP13.03□□□□□ -0.32
HDLBP-214ENST00000427183 SEPT5Q99719 369 aaPredicted RBP13.03□□□□□ -0.32
HDLBP-214ENST00000427183 DDX50Q9BQ39 737 aaKnown RBP13.03□□□□□ -0.32
HDLBP-214ENST00000427183 CPSF4O95639 269 aaKnown RBP13.03□□□□□ -0.32
HDLBP-214ENST00000427183 JAMLQ86YT9 394 aa13.03□□□□□ -0.32
HDLBP-214ENST00000427183 FAM71DQ8N9W8 422 aa13.03□□□□□ -0.32
HDLBP-214ENST00000427183 SLC7A14Q8TBB6 771 aa13.03□□□□□ -0.32
HDLBP-214ENST00000427183 UBASH3BQ8TF42 649 aa13.03□□□□□ -0.32
HDLBP-214ENST00000427183 ZNF560Q96MR9 790 aa13.03□□□□□ -0.32
HDLBP-214ENST00000427183 MMP19Q99542 508 aa13.03□□□□□ -0.32
HDLBP-214ENST00000427183 NOL6Q9H6R4 1146 aaKnown RBP13.03□□□□□ -0.32
HDLBP-214ENST00000427183 HEY2Q9UBP5 337 aa13.03□□□□□ -0.32
HDLBP-214ENST00000427183 FBXO40Q9UH90 709 aa13.03□□□□□ -0.32
HDLBP-214ENST00000427183 ADGRL3Q9HAR2 1447 aa13.03□□□□□ -0.32
HDLBP-214ENST00000427183 TK2O00142 265 aa13.03□□□□□ -0.32
HDLBP-214ENST00000427183 AGRPO00253 132 aa13.03□□□□□ -0.32
HDLBP-214ENST00000427183 PSMD3O43242 534 aa13.03□□□□□ -0.32
HDLBP-214ENST00000427183 ZNF682O95780 498 aa13.03□□□□□ -0.32
HDLBP-214ENST00000427183 NUP107P57740 925 aa13.03□□□□□ -0.32
HDLBP-214ENST00000427183 KLHL17Q6TDP4 642 aa13.03□□□□□ -0.32
HDLBP-214ENST00000427183 UBA3Q8TBC4 463 aa13.03□□□□□ -0.32
HDLBP-214ENST00000427183 KAT2BQ92831 832 aa13.03□□□□□ -0.32
HDLBP-214ENST00000427183 RNFT2Q96EX2 444 aa13.03□□□□□ -0.32
HDLBP-214ENST00000427183 HOXC10Q9NYD6 342 aa13.03□□□□□ -0.32
HDLBP-214ENST00000427183 MAP3K20Q9NYL2 800 aaKnown RBP13.03□□□□□ -0.32
HDLBP-214ENST00000427183 UPP2O95045 317 aa13.03□□□□□ -0.32
HDLBP-214ENST00000427183 NCF4Q15080 339 aa13.03□□□□□ -0.32
HDLBP-214ENST00000427183 CNGA2Q16280 664 aa13.03□□□□□ -0.32
HDLBP-214ENST00000427183 SHC4Q6S5L8 630 aa13.03□□□□□ -0.32
HDLBP-214ENST00000427183 PDP2Q9P2J9 529 aa13.03□□□□□ -0.32
HDLBP-214ENST00000427183 CFAP99D6REC4 459 aa13.03□□□□□ -0.32
HDLBP-214ENST00000427183 MFN2O95140 757 aa13.03□□□□□ -0.32
HDLBP-214ENST00000427183 PRDX5P30044 214 aa13.03□□□□□ -0.32
HDLBP-214ENST00000427183 GSSP48637 474 aa13.03□□□□□ -0.32
HDLBP-214ENST00000427183 MAPK10P53779 464 aa13.03□□□□□ -0.32
HDLBP-214ENST00000427183 AGBL2Q5U5Z8 902 aa13.03□□□□□ -0.32
HDLBP-214ENST00000427183 FAM45BPQ6NSW5 357 aa13.03□□□□□ -0.32
HDLBP-214ENST00000427183 KLHL24Q6TFL4 600 aa13.03□□□□□ -0.32
HDLBP-214ENST00000427183 LRRC34Q8IZ02 419 aa13.03□□□□□ -0.32
HDLBP-214ENST00000427183 WDR36Q8NI36 951 aaKnown RBP13.03□□□□□ -0.32
HDLBP-214ENST00000427183 TMEM143Q96AN5 459 aa13.03□□□□□ -0.32
HDLBP-214ENST00000427183 VTA1Q9NP79 307 aa13.03□□□□□ -0.32
HDLBP-214ENST00000427183 PCDHB8Q9UN66 801 aa13.03□□□□□ -0.32
HDLBP-214ENST00000427183 HEATR9A2RTY3 570 aa13.02□□□□□ -0.32
HDLBP-214ENST00000427183 SUPT7LO94864 414 aa13.02□□□□□ -0.32
HDLBP-214ENST00000427183 PRKCBP05771 671 aa13.02□□□□□ -0.32
HDLBP-214ENST00000427183 RRM2P31350 389 aa13.02□□□□□ -0.32
HDLBP-214ENST00000427183 IRAK1P51617 712 aa13.02□□□□□ -0.32
HDLBP-214ENST00000427183 TMEM62Q0P6H9 643 aa13.02□□□□□ -0.32
HDLBP-214ENST00000427183 SLC29A2Q14542 456 aa13.02□□□□□ -0.32
HDLBP-214ENST00000427183 SCARA3Q6AZY7 606 aa13.02□□□□□ -0.32
HDLBP-214ENST00000427183 ARMC6Q6NXE6 501 aa13.02□□□□□ -0.32
HDLBP-214ENST00000427183 NEK10Q6ZWH5 1172 aa13.02□□□□□ -0.32
HDLBP-214ENST00000427183 FRMD5Q7Z6J6 570 aa13.02□□□□□ -0.32
HDLBP-214ENST00000427183 C21orf2O43822 256 aa13.02□□□□□ -0.32
HDLBP-214ENST00000427183 ZNF862O60290 1169 aa13.02□□□□□ -0.32
HDLBP-214ENST00000427183 SFNP31947 248 aa13.02□□□□□ -0.32
HDLBP-214ENST00000427183 GPC1P35052 558 aa13.02□□□□□ -0.32
HDLBP-214ENST00000427183 IL6STP40189 918 aaPredicted RBP13.02□□□□□ -0.32
HDLBP-214ENST00000427183 LAMB3Q13751 1172 aa13.02□□□□□ -0.32
HDLBP-214ENST00000427183 EPC2Q52LR7 807 aa13.02□□□□□ -0.32
HDLBP-214ENST00000427183 ARMC4Q5T2S8 1044 aa13.02□□□□□ -0.32
HDLBP-214ENST00000427183 IFNLR1Q8IU57 520 aaPredicted RBP13.02□□□□□ -0.32
HDLBP-214ENST00000427183 GUF1Q8N442 669 aaKnown RBP13.02□□□□□ -0.32
HDLBP-214ENST00000427183 SERHL2Q9H4I8 314 aa13.02□□□□□ -0.32
HDLBP-214ENST00000427183 CYLDQ9NQC7 956 aa13.02□□□□□ -0.32
HDLBP-214ENST00000427183 SERHLQ9NQF3 203 aa13.02□□□□□ -0.32
HDLBP-214ENST00000427183 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.02□□□□□ -0.322e-16■■□□□ 14.5
HDLBP-214ENST00000427183 TFR2Q9UP52 801 aa13.02□□□□□ -0.32
HDLBP-214ENST00000427183 HPS5Q9UPZ3 1129 aa13.02□□□□□ -0.32
HDLBP-214ENST00000427183 NCAPD2Q15021 1401 aa13.02□□□□□ -0.33
HDLBP-214ENST00000427183 LRRIQ3A6PVS8 624 aaPredicted RBP13.02□□□□□ -0.33
HDLBP-214ENST00000427183 CTSHP09668 335 aa13.02□□□□□ -0.33
HDLBP-214ENST00000427183 FOSL2P15408 326 aa13.02□□□□□ -0.33
HDLBP-214ENST00000427183 ACADSP16219 412 aa13.02□□□□□ -0.33
HDLBP-214ENST00000427183 TPP2P29144 1249 aaPredicted RBP13.02□□□□□ -0.33
HDLBP-214ENST00000427183 ZNF57Q68EA5 555 aaPredicted RBP13.02□□□□□ -0.33
HDLBP-214ENST00000427183 CYB5D1Q6P9G0 228 aa13.02□□□□□ -0.33
HDLBP-214ENST00000427183 TRIM65Q6PJ69 517 aa13.02□□□□□ -0.33
HDLBP-214ENST00000427183 RTL3Q8N8U3 475 aaKnown RBP13.02□□□□□ -0.33
HDLBP-214ENST00000427183 MAGED4Q96JG8 741 aa13.02□□□□□ -0.33
HDLBP-214ENST00000427183 C6orf62Q9GZU0 229 aaPredicted RBP13.02□□□□□ -0.33
HDLBP-214ENST00000427183 VIRMAQ69YN4 1812 aaKnown RBP13.02□□□□□ -0.33
HDLBP-214ENST00000427183 KIF28PB7ZC32 967 aa13.02□□□□□ -0.33
HDLBP-214ENST00000427183 PSMB9P28065 219 aa13.02□□□□□ -0.33
HDLBP-214ENST00000427183 YWHABP31946 246 aaKnown RBP13.02□□□□□ -0.33
HDLBP-214ENST00000427183 TRAF2Q12933 501 aa13.02□□□□□ -0.33
HDLBP-214ENST00000427183 SLC18A3Q16572 532 aa13.02□□□□□ -0.33
HDLBP-214ENST00000427183 C12orf60Q5U649 245 aa13.02□□□□□ -0.33
HDLBP-214ENST00000427183 ZMYND8Q9ULU4 1186 aaPredicted RBP13.02□□□□□ -0.33
HDLBP-214ENST00000427183 NCOA3Q9Y6Q9 1424 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms