RNA–Protein interactions for RNA: ENST00000426886.1

SMIM12-203, Transcript of small integral membrane protein 12, humanhuman

TSL 1 (best)

Gene SMIM12, Length 2,618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-203ENST00000426886 GBP2P32456 591 aaPredicted RBP13.35□□□□□ -0.27
SMIM12-203ENST00000426886 GRIK1P39086 918 aa13.35□□□□□ -0.27
SMIM12-203ENST00000426886 ZNF165P49910 485 aa13.35□□□□□ -0.27
SMIM12-203ENST00000426886 EPHB3P54753 998 aa13.35□□□□□ -0.27
SMIM12-203ENST00000426886 TAF12Q16514 161 aa13.35□□□□□ -0.27
SMIM12-203ENST00000426886 MAN2A1Q16706 1144 aa13.35□□□□□ -0.27
SMIM12-203ENST00000426886 PABPC1LQ4VXU2 614 aaKnown RBP13.35□□□□□ -0.27
SMIM12-203ENST00000426886 ARHGEF19Q8IW93 802 aa13.35□□□□□ -0.27
SMIM12-203ENST00000426886 LMO3Q8TAP4 145 aa13.35□□□□□ -0.27
SMIM12-203ENST00000426886 ITFG1Q8TB96 612 aa13.35□□□□□ -0.27
SMIM12-203ENST00000426886 SPATA18Q8TC71 538 aa13.35□□□□□ -0.27
SMIM12-203ENST00000426886 NECTIN4Q96NY8 510 aa13.35□□□□□ -0.27
SMIM12-203ENST00000426886 NT5C1BQ96P26 610 aa13.35□□□□□ -0.27
SMIM12-203ENST00000426886 INTS2Q9H0H0 1204 aaKnown RBP13.35□□□□□ -0.27
SMIM12-203ENST00000426886 NDST4Q9H3R1 872 aa13.35□□□□□ -0.27
SMIM12-203ENST00000426886 HAPLN1P10915 354 aaPredicted RBP13.35□□□□□ -0.27
SMIM12-203ENST00000426886 MYL4P12829 197 aa13.35□□□□□ -0.27
SMIM12-203ENST00000426886 CCDC130P13994 396 aa13.35□□□□□ -0.27
SMIM12-203ENST00000426886 ATF6P18850 670 aa13.35□□□□□ -0.27
SMIM12-203ENST00000426886 TERF1P54274 439 aa13.35□□□□□ -0.27
SMIM12-203ENST00000426886 ZP2Q05996 745 aa13.35□□□□□ -0.27
SMIM12-203ENST00000426886 MTMR3Q13615 1198 aa13.35□□□□□ -0.27
SMIM12-203ENST00000426886 CUL2Q13617 745 aa13.35□□□□□ -0.27
SMIM12-203ENST00000426886 VWA3BQ502W6 1294 aa13.35□□□□□ -0.27
SMIM12-203ENST00000426886 GJB7Q6PEY0 223 aa13.35□□□□□ -0.27
SMIM12-203ENST00000426886 C4orf50Q6ZRC1 276 aa13.35□□□□□ -0.27
SMIM12-203ENST00000426886 TNIP3Q96KP6 325 aa13.35□□□□□ -0.27
SMIM12-203ENST00000426886 ZNF518BQ9C0D4 1074 aa13.35□□□□□ -0.27
SMIM12-203ENST00000426886 CLUHO75153 1309 aa13.34□□□□□ -0.27
SMIM12-203ENST00000426886 TSC2P49815 1807 aa13.34□□□□□ -0.27
SMIM12-203ENST00000426886 PTPN2P17706 415 aa13.34□□□□□ -0.27
SMIM12-203ENST00000426886 HOXA9P31269 272 aa13.34□□□□□ -0.27
SMIM12-203ENST00000426886 CACNA2D1P54289 1103 aa13.34□□□□□ -0.27
SMIM12-203ENST00000426886 SMARCB1Q12824 385 aa13.34□□□□□ -0.27
SMIM12-203ENST00000426886 NCAPHQ15003 741 aa13.34□□□□□ -0.27
SMIM12-203ENST00000426886 SLC5A9Q2M3M2 681 aa13.34□□□□□ -0.27
SMIM12-203ENST00000426886 MIIPQ5JXC2 388 aa13.34□□□□□ -0.27
SMIM12-203ENST00000426886 DNAJB7Q7Z6W7 309 aaPredicted RBP13.34□□□□□ -0.27
SMIM12-203ENST00000426886 ADHFE1Q8IWW8 467 aa13.34□□□□□ -0.27
SMIM12-203ENST00000426886 WHAMMQ8TF30 809 aa13.34□□□□□ -0.27
SMIM12-203ENST00000426886 TCEAL4Q96EI5 215 aa13.34□□□□□ -0.27
SMIM12-203ENST00000426886 HEXIM2Q96MH2 286 aaKnown RBP13.34□□□□□ -0.27
SMIM12-203ENST00000426886 FUCA2Q9BTY2 467 aa13.34□□□□□ -0.27
SMIM12-203ENST00000426886 NT5C1AQ9BXI3 368 aa13.34□□□□□ -0.27
SMIM12-203ENST00000426886 COL25A1Q9BXS0 654 aaPredicted RBP13.34□□□□□ -0.27
SMIM12-203ENST00000426886 B3GNT5Q9BYG0 378 aa13.34□□□□□ -0.27
SMIM12-203ENST00000426886 ELOVL4Q9GZR5 314 aa13.34□□□□□ -0.27
SMIM12-203ENST00000426886 CYP3A43Q9HB55 503 aa13.34□□□□□ -0.27
SMIM12-203ENST00000426886 C2CD4DB7Z1M9 353 aa13.34□□□□□ -0.27
SMIM12-203ENST00000426886 NRG2O14511 850 aaPredicted RBP13.34□□□□□ -0.27
SMIM12-203ENST00000426886 P4HA2O15460 535 aa13.34□□□□□ -0.27
SMIM12-203ENST00000426886 CILPO75339 1184 aa13.34□□□□□ -0.27
SMIM12-203ENST00000426886 ATP1A3P13637 1013 aa13.34□□□□□ -0.27
SMIM12-203ENST00000426886 FSHRP23945 695 aa13.34□□□□□ -0.27
SMIM12-203ENST00000426886 ADORA2BP29275 332 aa13.34□□□□□ -0.27
SMIM12-203ENST00000426886 IFRD2Q12894 506 aaPredicted RBP13.34□□□□□ -0.27
SMIM12-203ENST00000426886 KRT31Q15323 416 aa13.34□□□□□ -0.27
SMIM12-203ENST00000426886 MAPRE1Q15691 268 aaKnown RBP13.34□□□□□ -0.27
SMIM12-203ENST00000426886 EXOC3L4Q17RC7 722 aa13.34□□□□□ -0.27
SMIM12-203ENST00000426886 PHLDB3Q6NSJ2 640 aa13.34□□□□□ -0.27
SMIM12-203ENST00000426886 GPIHBP1Q8IV16 184 aa13.34□□□□□ -0.27
SMIM12-203ENST00000426886 GJD3Q8N144 294 aa13.34□□□□□ -0.27
SMIM12-203ENST00000426886 SLC2A14Q8TDB8 520 aa13.34□□□□□ -0.27
SMIM12-203ENST00000426886 UBE2TQ9NPD8 197 aaPredicted RBP13.34□□□□□ -0.27
SMIM12-203ENST00000426886 MRPS23Q9Y3D9 190 aaKnown RBP13.34□□□□□ -0.27
SMIM12-203ENST00000426886 BECN2A8MW95 431 aa13.33□□□□□ -0.28
SMIM12-203ENST00000426886 CALCAP01258 141 aa13.33□□□□□ -0.28
SMIM12-203ENST00000426886 FAM163BP0C2L3 166 aa13.33□□□□□ -0.28
SMIM12-203ENST00000426886 EEF1GP26641 437 aaKnown RBP13.33□□□□□ -0.28
SMIM12-203ENST00000426886 CCR2P41597 374 aa13.33□□□□□ -0.28
SMIM12-203ENST00000426886 CFAP221Q4G0U5 840 aa13.33□□□□□ -0.28
SMIM12-203ENST00000426886 CDKAL1Q5VV42 579 aa13.33□□□□□ -0.28
SMIM12-203ENST00000426886 GBP6Q6ZN66 633 aa13.33□□□□□ -0.28
SMIM12-203ENST00000426886 PDZD4Q76G19 769 aaPredicted RBP13.33□□□□□ -0.28
SMIM12-203ENST00000426886 DHX40Q8IX18 779 aaKnown RBP13.33□□□□□ -0.28
SMIM12-203ENST00000426886 C2orf15Q8WU43 125 aaKnown RBP13.33□□□□□ -0.28
SMIM12-203ENST00000426886 JAKMIP2Q96AA8 810 aa13.33□□□□□ -0.28
SMIM12-203ENST00000426886 KCNK16Q96T55 309 aa13.33□□□□□ -0.28
SMIM12-203ENST00000426886 TMEM30AQ9NV96 361 aa13.33□□□□□ -0.28
SMIM12-203ENST00000426886 LIMD1Q9UGP4 676 aa13.33□□□□□ -0.28
SMIM12-203ENST00000426886 MAFFQ9ULX9 164 aa13.33□□□□□ -0.28
SMIM12-203ENST00000426886 MTCL1Q9Y4B5 1905 aaKnown RBP13.33□□□□□ -0.28
SMIM12-203ENST00000426886 F8VP50 259 aa13.33□□□□□ -0.28
SMIM12-203ENST00000426886 INCA1Q0VD86 236 aa13.33□□□□□ -0.28
SMIM12-203ENST00000426886 VEPH1Q14D04 833 aa13.33□□□□□ -0.28
SMIM12-203ENST00000426886 CYP4A22Q5TCH4 519 aa13.33□□□□□ -0.28
SMIM12-203ENST00000426886 TMEM270Q6UE05 265 aa13.33□□□□□ -0.28
SMIM12-203ENST00000426886 UNC93AQ86WB7 457 aa13.33□□□□□ -0.28
SMIM12-203ENST00000426886 MCRS1Q96EZ8 462 aa13.33□□□□□ -0.28
SMIM12-203ENST00000426886 CYFIP2Q96F07 1278 aa13.33□□□□□ -0.28
SMIM12-203ENST00000426886 MYADMQ96S97 322 aa13.33□□□□□ -0.28
SMIM12-203ENST00000426886 ASAH2Q9NR71 780 aa13.33□□□□□ -0.28
SMIM12-203ENST00000426886 PCDHB4Q9Y5E5 795 aa13.33□□□□□ -0.28
SMIM12-203ENST00000426886 A0A1W2PRU2 124 aa13.32□□□□□ -0.28
SMIM12-203ENST00000426886 PMM2O15305 246 aa13.32□□□□□ -0.28
SMIM12-203ENST00000426886 PLD1Q13393 1074 aa13.32□□□□□ -0.28
SMIM12-203ENST00000426886 ARHGAP44Q17R89 818 aa13.32□□□□□ -0.28
SMIM12-203ENST00000426886 TRIM65Q6PJ69 517 aa13.32□□□□□ -0.28
SMIM12-203ENST00000426886 LUZP1Q86V48 1076 aa13.32□□□□□ -0.28
SMIM12-203ENST00000426886 FUKQ8N0W3 1084 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms