RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.79■□□□□ 0.12
PDAP1-202ENST00000426447 TMLHEQ9NVH6 421 aa15.79■□□□□ 0.12
PDAP1-202ENST00000426447 WASF3Q9UPY6 502 aa15.79■□□□□ 0.12
PDAP1-202ENST00000426447 C2CD2Q9Y426 696 aa15.79■□□□□ 0.12
PDAP1-202ENST00000426447 VWA3AA6NCI4 1184 aa15.78■□□□□ 0.12
PDAP1-202ENST00000426447 TRAK2O60296 914 aa15.78■□□□□ 0.12
PDAP1-202ENST00000426447 KRT18P05783 430 aaKnown RBP15.78■□□□□ 0.12
PDAP1-202ENST00000426447 LMAN2Q12907 356 aa15.78■□□□□ 0.12
PDAP1-202ENST00000426447 KIAA1211LQ6NV74 962 aa15.78■□□□□ 0.12
PDAP1-202ENST00000426447 FSIP1Q8NA03 581 aa15.78■□□□□ 0.12
PDAP1-202ENST00000426447 ZCCHC14Q8WYQ9 949 aaKnown RBP15.78■□□□□ 0.12
PDAP1-202ENST00000426447 REEP2Q9BRK0 252 aa15.78■□□□□ 0.12
PDAP1-202ENST00000426447 NUSAP1Q9BXS6 441 aaKnown RBP15.78■□□□□ 0.12
PDAP1-202ENST00000426447 PARVGQ9HBI0 331 aa15.78■□□□□ 0.12
PDAP1-202ENST00000426447 ALDH1A2O94788 518 aa15.77■□□□□ 0.12
PDAP1-202ENST00000426447 BCKDHBP21953 392 aa15.77■□□□□ 0.12
PDAP1-202ENST00000426447 CYP2F1P24903 491 aa15.77■□□□□ 0.12
PDAP1-202ENST00000426447 ZNF77Q15935 545 aa15.77■□□□□ 0.12
PDAP1-202ENST00000426447 EML3Q32P44 896 aa15.77■□□□□ 0.12
PDAP1-202ENST00000426447 TRIM61Q5EBN2 209 aa15.77■□□□□ 0.12
PDAP1-202ENST00000426447 MCTP1Q6DN14 999 aa15.77■□□□□ 0.12
PDAP1-202ENST00000426447 SLFN12LQ6IEE8 588 aa15.77■□□□□ 0.12
PDAP1-202ENST00000426447 LRSAM1Q6UWE0 723 aa15.77■□□□□ 0.12
PDAP1-202ENST00000426447 LPCAT2Q7L5N7 544 aa15.77■□□□□ 0.12
PDAP1-202ENST00000426447 GPBP1Q86WP2 473 aa15.77■□□□□ 0.12
PDAP1-202ENST00000426447 EFCAB13Q8IY85 973 aa15.77■□□□□ 0.12
PDAP1-202ENST00000426447 CCDC33Q8N5R6 958 aa15.77■□□□□ 0.12
PDAP1-202ENST00000426447 ARL14EPQ8N8R7 260 aaPredicted RBP15.77■□□□□ 0.12
PDAP1-202ENST00000426447 USP33Q8TEY7 942 aa15.77■□□□□ 0.12
PDAP1-202ENST00000426447 GATA6Q92908 595 aa15.77■□□□□ 0.12
PDAP1-202ENST00000426447 KCNN1Q92952 543 aa15.77■□□□□ 0.12
PDAP1-202ENST00000426447 CNOT6LQ96LI5 555 aaKnown RBP15.77■□□□□ 0.12
PDAP1-202ENST00000426447 ZNF560Q96MR9 790 aa15.77■□□□□ 0.12
PDAP1-202ENST00000426447 SLC22A12Q96S37 553 aa15.77■□□□□ 0.12
PDAP1-202ENST00000426447 TMEM121BQ9BXQ6 578 aaPredicted RBP15.77■□□□□ 0.12
PDAP1-202ENST00000426447 CCSER1Q9C0I3 900 aa15.77■□□□□ 0.12
PDAP1-202ENST00000426447 LINC00597Q9H2U6 94 aa15.77■□□□□ 0.12
PDAP1-202ENST00000426447 TMEM206Q9H813 350 aa15.77■□□□□ 0.12
PDAP1-202ENST00000426447 AGO2Q9UKV8 859 aaKnown RBP15.77■□□□□ 0.12
PDAP1-202ENST00000426447 SPAG17Q6Q759 2223 aa15.77■□□□□ 0.12
PDAP1-202ENST00000426447 ATG2BQ96BY7 2078 aa15.76■□□□□ 0.11
PDAP1-202ENST00000426447 ANKRD63C9JTQ0 380 aa15.76■□□□□ 0.11
PDAP1-202ENST00000426447 NFATC1O95644 943 aa15.76■□□□□ 0.11
PDAP1-202ENST00000426447 HDCP19113 662 aa15.76■□□□□ 0.11
PDAP1-202ENST00000426447 ABCD1P33897 745 aa15.76■□□□□ 0.11
PDAP1-202ENST00000426447 RDXP35241 583 aaKnown RBP15.76■□□□□ 0.11
PDAP1-202ENST00000426447 MAPK8P45983 427 aa15.76■□□□□ 0.11
PDAP1-202ENST00000426447 KCNB1Q14721 858 aa15.76■□□□□ 0.11
PDAP1-202ENST00000426447 SLC39A4Q6P5W5 647 aa15.76■□□□□ 0.11
PDAP1-202ENST00000426447 SH3RF2Q8TEC5 729 aa15.76■□□□□ 0.11
PDAP1-202ENST00000426447 CALML4Q96GE6 196 aa15.76■□□□□ 0.11
PDAP1-202ENST00000426447 TRMT2BQ96GJ1 504 aaKnown RBP15.76■□□□□ 0.11
PDAP1-202ENST00000426447 ZSCAN31Q96LW9 406 aaPredicted RBP15.76■□□□□ 0.11
PDAP1-202ENST00000426447 ACBD6Q9BR61 282 aa15.76■□□□□ 0.11
PDAP1-202ENST00000426447 DDX43Q9NXZ2 648 aaKnown RBP15.76■□□□□ 0.11
PDAP1-202ENST00000426447 LHX6Q9UPM6 363 aa15.76■□□□□ 0.11
PDAP1-202ENST00000426447 K7EQS6 105 aa15.75■□□□□ 0.11
PDAP1-202ENST00000426447 HYAL3O43820 417 aaPredicted RBP15.75■□□□□ 0.11
PDAP1-202ENST00000426447 EIF5BO60841 1220 aaKnown RBP15.75■□□□□ 0.11
PDAP1-202ENST00000426447 HUS1O60921 280 aa15.75■□□□□ 0.11
PDAP1-202ENST00000426447 TBCAO75347 108 aaKnown RBP15.75■□□□□ 0.11
PDAP1-202ENST00000426447 NOL4O94818 638 aa15.75■□□□□ 0.11
PDAP1-202ENST00000426447 ACAT1P24752 427 aaKnown RBP15.75■□□□□ 0.11
PDAP1-202ENST00000426447 PNPLA4P41247 253 aa15.75■□□□□ 0.11
PDAP1-202ENST00000426447 ATP2C1P98194 919 aaPredicted RBP15.75■□□□□ 0.11
PDAP1-202ENST00000426447 MYL7Q01449 175 aa15.75■□□□□ 0.11
PDAP1-202ENST00000426447 RING1Q06587 406 aa15.75■□□□□ 0.11
PDAP1-202ENST00000426447 CRY1Q16526 586 aa15.75■□□□□ 0.11
PDAP1-202ENST00000426447 TMEM119Q4V9L6 283 aa15.75■□□□□ 0.11
PDAP1-202ENST00000426447 RILPL1Q5EBL4 403 aa15.75■□□□□ 0.11
PDAP1-202ENST00000426447 ARMCX6Q7L4S7 300 aa15.75■□□□□ 0.11
PDAP1-202ENST00000426447 RASSF3Q86WH2 238 aa15.75■□□□□ 0.11
PDAP1-202ENST00000426447 SPATA2LQ8IUW3 424 aaPredicted RBP15.75■□□□□ 0.11
PDAP1-202ENST00000426447 SCN4BQ8IWT1 228 aa15.75■□□□□ 0.11
PDAP1-202ENST00000426447 MDGA1Q8NFP4 955 aa15.75■□□□□ 0.11
PDAP1-202ENST00000426447 SPACA7Q96KW9 195 aa15.75■□□□□ 0.11
PDAP1-202ENST00000426447 MYRFLQ96LU7 910 aa15.75■□□□□ 0.11
PDAP1-202ENST00000426447 ABCB6Q9NP58 842 aa15.75■□□□□ 0.11
PDAP1-202ENST00000426447 EVLQ9UI08 416 aaPredicted RBP15.75■□□□□ 0.11
PDAP1-202ENST00000426447 GTF3C4Q9UKN8 822 aa15.75■□□□□ 0.11
PDAP1-202ENST00000426447 MMP17Q9ULZ9 603 aa15.75■□□□□ 0.11
PDAP1-202ENST00000426447 NEUROG3Q9Y4Z2 214 aa15.75■□□□□ 0.11
PDAP1-202ENST00000426447 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.74■□□□□ 0.11
PDAP1-202ENST00000426447 MYMKA6NI61 221 aa15.74■□□□□ 0.11
PDAP1-202ENST00000426447 TADA3O75528 432 aa15.74■□□□□ 0.11
PDAP1-202ENST00000426447 UBA7P41226 1012 aa15.74■□□□□ 0.11
PDAP1-202ENST00000426447 ATXN3P54252 364 aaPredicted RBP15.74■□□□□ 0.11
PDAP1-202ENST00000426447 MRPS21P82921 87 aaKnown RBP15.74■□□□□ 0.11
PDAP1-202ENST00000426447 GTF2BQ00403 316 aa15.74■□□□□ 0.11
PDAP1-202ENST00000426447 USP4Q13107 963 aa15.74■□□□□ 0.11
PDAP1-202ENST00000426447 ZC2HC1CQ53FD0 456 aaPredicted RBP15.74■□□□□ 0.11
PDAP1-202ENST00000426447 LMBRD2Q68DH5 695 aaPredicted RBP15.74■□□□□ 0.11
PDAP1-202ENST00000426447 NT5DC4Q86YG4 428 aa15.74■□□□□ 0.11
PDAP1-202ENST00000426447 TMEFF1Q8IYR6 380 aa15.74■□□□□ 0.11
PDAP1-202ENST00000426447 PGBD3Q8N328 593 aa15.74■□□□□ 0.11
PDAP1-202ENST00000426447 PDCL2Q8N4E4 241 aa15.74■□□□□ 0.11
PDAP1-202ENST00000426447 RASSF8Q8NHQ8 419 aa15.74■□□□□ 0.11
PDAP1-202ENST00000426447 LRRC15Q8TF66 581 aa15.74■□□□□ 0.11
PDAP1-202ENST00000426447 LEO1Q8WVC0 666 aaPredicted RBP15.74■□□□□ 0.11
PDAP1-202ENST00000426447 RLN3Q8WXF3 142 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms