RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 RTN4Q9NQC3 1192 aaKnown RBP26.05■■□□□ 1.76
VEGFA-209ENST00000425836 PCDHB4Q9Y5E5 795 aa26.05■■□□□ 1.76
VEGFA-209ENST00000425836 GRXCR2A6NFK2 248 aa26.04■■□□□ 1.76
VEGFA-209ENST00000425836 TEX33O43247 280 aa26.04■■□□□ 1.76
VEGFA-209ENST00000425836 SERPINC1P01008 464 aa26.04■■□□□ 1.76
VEGFA-209ENST00000425836 LRG1P02750 347 aa26.04■■□□□ 1.76
VEGFA-209ENST00000425836 KLK7P49862 253 aa26.04■■□□□ 1.76
VEGFA-209ENST00000425836 MFAP3P55082 362 aa26.04■■□□□ 1.76
VEGFA-209ENST00000425836 SMAD4Q13485 552 aaKnown RBP26.04■■□□□ 1.76
VEGFA-209ENST00000425836 CES5AQ6NT32 575 aa26.04■■□□□ 1.76
VEGFA-209ENST00000425836 AJAP1Q9UKB5 411 aaPredicted RBP26.04■■□□□ 1.76
VEGFA-209ENST00000425836 SIK3Q9Y2K2 1263 aa26.04■■□□□ 1.76
VEGFA-209ENST00000425836 USP15Q9Y4E8 981 aaPredicted RBP26.04■■□□□ 1.76
VEGFA-209ENST00000425836 CLDN5O00501 218 aa26.03■■□□□ 1.76
VEGFA-209ENST00000425836 MBTPS2O43462 519 aa26.03■■□□□ 1.76
VEGFA-209ENST00000425836 POU2F2P09086 479 aa26.03■■□□□ 1.76
VEGFA-209ENST00000425836 BDNFP23560 247 aa26.03■■□□□ 1.76
VEGFA-209ENST00000425836 FANCCQ00597 558 aa26.03■■□□□ 1.76
VEGFA-209ENST00000425836 SYCP1Q15431 976 aa26.03■■□□□ 1.76
VEGFA-209ENST00000425836 TMEM270Q6UE05 265 aa26.03■■□□□ 1.76
VEGFA-209ENST00000425836 CYP26C1Q6V0L0 522 aa26.03■■□□□ 1.76
VEGFA-209ENST00000425836 PAQR9Q6ZVX9 377 aa26.03■■□□□ 1.76
VEGFA-209ENST00000425836 SUSD6Q92537 303 aa26.03■■□□□ 1.76
VEGFA-209ENST00000425836 SMG7Q92540 1137 aaKnown RBP26.03■■□□□ 1.76
VEGFA-209ENST00000425836 HEXIM2Q96MH2 286 aaKnown RBP26.03■■□□□ 1.76
VEGFA-209ENST00000425836 ERGIC2Q96RQ1 377 aa26.03■■□□□ 1.76
VEGFA-209ENST00000425836 DNAI2Q9GZS0 605 aa26.03■■□□□ 1.76
VEGFA-209ENST00000425836 PLCB1Q9NQ66 1216 aa26.03■■□□□ 1.76
VEGFA-209ENST00000425836 FAM49BQ9NUQ9 324 aa26.03■■□□□ 1.76
VEGFA-209ENST00000425836 DNAJC12Q9UKB3 198 aa26.03■■□□□ 1.76
VEGFA-209ENST00000425836 A0A1B0GTH6 734 aa26.03■■□□□ 1.76
VEGFA-209ENST00000425836 RNF225M0QZC1 329 aaPredicted RBP26.03■■□□□ 1.76
VEGFA-209ENST00000425836 XYLBO75191 536 aa26.03■■□□□ 1.76
VEGFA-209ENST00000425836 TRIM21P19474 475 aaKnown RBP26.03■■□□□ 1.76
VEGFA-209ENST00000425836 MAGEA11P43364 429 aa26.03■■□□□ 1.76
VEGFA-209ENST00000425836 ALDH1A3P47895 512 aa26.03■■□□□ 1.76
VEGFA-209ENST00000425836 FILIP1LQ4L180 1135 aa26.03■■□□□ 1.76
VEGFA-209ENST00000425836 FUKQ8N0W3 1084 aa26.03■■□□□ 1.76
VEGFA-209ENST00000425836 ATXN2LQ8WWM7 1075 aaKnown RBP26.03■■□□□ 1.76
VEGFA-209ENST00000425836 ZNF518BQ9C0D4 1074 aa26.03■■□□□ 1.76
VEGFA-209ENST00000425836 CEP72Q9P209 647 aa26.03■■□□□ 1.76
VEGFA-209ENST00000425836 CNTN6Q9UQ52 1028 aa26.03■■□□□ 1.76
VEGFA-209ENST00000425836 CCDC130P13994 396 aa26.02■■□□□ 1.76
VEGFA-209ENST00000425836 GPR15P49685 360 aa26.02■■□□□ 1.76
VEGFA-209ENST00000425836 ARHGAP44Q17R89 818 aa26.02■■□□□ 1.76
VEGFA-209ENST00000425836 AAK1Q2M2I8 961 aa26.02■■□□□ 1.76
VEGFA-209ENST00000425836 ATAT1Q5SQI0 421 aa26.02■■□□□ 1.76
VEGFA-209ENST00000425836 IQCEQ6IPM2 695 aa26.02■■□□□ 1.76
VEGFA-209ENST00000425836 PTCRAQ6ISU1 281 aaPredicted RBP26.02■■□□□ 1.76
VEGFA-209ENST00000425836 SLC2A14Q8TDB8 520 aa26.02■■□□□ 1.76
VEGFA-209ENST00000425836 PIDD1Q9HB75 910 aa26.02■■□□□ 1.76
VEGFA-209ENST00000425836 NOL4O94818 638 aa26.01■■□□□ 1.75
VEGFA-209ENST00000425836 UCHL3P15374 230 aa26.01■■□□□ 1.75
VEGFA-209ENST00000425836 ATF6P18850 670 aa26.01■■□□□ 1.75
VEGFA-209ENST00000425836 EPHB3P54753 998 aa26.01■■□□□ 1.75
VEGFA-209ENST00000425836 MRPS5P82675 430 aaKnown RBP26.01■■□□□ 1.75
VEGFA-209ENST00000425836 PLD1Q13393 1074 aa26.01■■□□□ 1.75
VEGFA-209ENST00000425836 NR1I3Q14994 352 aa26.01■■□□□ 1.75
VEGFA-209ENST00000425836 PUS10Q3MIT2 529 aaKnown RBP26.01■■□□□ 1.75
VEGFA-209ENST00000425836 VSTM1Q6UX27 236 aa26.01■■□□□ 1.75
VEGFA-209ENST00000425836 CYFIP2Q96F07 1278 aa26.01■■□□□ 1.75
VEGFA-209ENST00000425836 HNRNPABQ99729 332 aaKnown RBP26.01■■□□□ 1.75
VEGFA-209ENST00000425836 MED10Q9BTT4 135 aa26.01■■□□□ 1.75
VEGFA-209ENST00000425836 FHOD1Q9Y613 1164 aa26.01■■□□□ 1.75
VEGFA-209ENST00000425836 KCNQ1P51787 676 aa26■■□□□ 1.75
VEGFA-209ENST00000425836 ZNF132P52740 706 aa26■■□□□ 1.75
VEGFA-209ENST00000425836 CACNA2D1P54289 1103 aa26■■□□□ 1.75
VEGFA-209ENST00000425836 DDR2Q16832 855 aa26■■□□□ 1.75
VEGFA-209ENST00000425836 FAM35AQ86V20 835 aa26■■□□□ 1.75
VEGFA-209ENST00000425836 RBBP8NLQ8NC74 664 aaPredicted RBP26■■□□□ 1.75
VEGFA-209ENST00000425836 RIPOR3Q96MK2 946 aa26■■□□□ 1.75
VEGFA-209ENST00000425836 NAA15Q9BXJ9 866 aaKnown RBP26■■□□□ 1.75
VEGFA-209ENST00000425836 GANQ9H2C0 597 aa26■■□□□ 1.75
VEGFA-209ENST00000425836 FAM207AQ9NSI2 230 aaPredicted RBP26■■□□□ 1.75
VEGFA-209ENST00000425836 BRWD1Q9NSI6 2320 aa26■■□□□ 1.75
VEGFA-209ENST00000425836 EPHB6O15197 1021 aa25.99■■□□□ 1.75
VEGFA-209ENST00000425836 PAEPP09466 180 aa25.99■■□□□ 1.75
VEGFA-209ENST00000425836 MTHFRP42898 656 aa25.99■■□□□ 1.75
VEGFA-209ENST00000425836 RPL10AP62906 217 aaKnown RBP25.99■■□□□ 1.75
VEGFA-209ENST00000425836 SDHAF4Q5VUM1 108 aa25.99■■□□□ 1.75
VEGFA-209ENST00000425836 GRASPQ7Z6J2 395 aaPredicted RBP25.99■■□□□ 1.75
VEGFA-209ENST00000425836 SCN4BQ8IWT1 228 aa25.99■■□□□ 1.75
VEGFA-209ENST00000425836 SHC3Q92529 594 aa25.99■■□□□ 1.75
VEGFA-209ENST00000425836 ZNF512Q96ME7 567 aaPredicted RBP25.99■■□□□ 1.75
VEGFA-209ENST00000425836 PCMTD1Q96MG8 357 aaPredicted RBP25.99■■□□□ 1.75
VEGFA-209ENST00000425836 TMEM30AQ9NV96 361 aa25.99■■□□□ 1.75
VEGFA-209ENST00000425836 HCFC1R1Q9NWW0 138 aa25.99■■□□□ 1.75
VEGFA-209ENST00000425836 DNMT3BQ9UBC3 853 aaKnown RBP25.99■■□□□ 1.75
VEGFA-209ENST00000425836 ATP8B3O60423 1300 aa25.99■■□□□ 1.75
VEGFA-209ENST00000425836 KRT5P13647 590 aa25.99■■□□□ 1.75
VEGFA-209ENST00000425836 GRIK1P39086 918 aa25.99■■□□□ 1.75
VEGFA-209ENST00000425836 UBASH3AP57075 661 aa25.99■■□□□ 1.75
VEGFA-209ENST00000425836 CBX2Q14781 532 aaPredicted RBP25.99■■□□□ 1.75
VEGFA-209ENST00000425836 PTPN21Q16825 1174 aa25.99■■□□□ 1.75
VEGFA-209ENST00000425836 PPP1R26Q5T8A7 1209 aaPredicted RBP25.99■■□□□ 1.75
VEGFA-209ENST00000425836 GAS2L3Q86XJ1 694 aa25.99■■□□□ 1.75
VEGFA-209ENST00000425836 ELMOD1Q8N336 334 aa25.99■■□□□ 1.75
VEGFA-209ENST00000425836 GPR152Q8TDT2 470 aa25.99■■□□□ 1.75
VEGFA-209ENST00000425836 GIPC2Q8TF65 315 aa25.99■■□□□ 1.75
VEGFA-209ENST00000425836 ASB2Q96Q27 587 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms