RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 NEU2Q9Y3R4 380 aa12.18□□□□□ -0.46
UBR4-207ENST00000425413 POC1B-GALNT4F8VUJ3 575 aa12.18□□□□□ -0.46
UBR4-207ENST00000425413 ADCY6O43306 1168 aa12.18□□□□□ -0.46
UBR4-207ENST00000425413 NPTXRO95502 500 aa12.18□□□□□ -0.46
UBR4-207ENST00000425413 PECAM1P16284 738 aaPredicted RBP12.18□□□□□ -0.46
UBR4-207ENST00000425413 KLRC2P26717 231 aa12.18□□□□□ -0.46
UBR4-207ENST00000425413 CDKN2BP42772 138 aa12.18□□□□□ -0.46
UBR4-207ENST00000425413 MMP13P45452 471 aa12.18□□□□□ -0.46
UBR4-207ENST00000425413 GDF10P55107 478 aa12.18□□□□□ -0.46
UBR4-207ENST00000425413 CCNA1P78396 465 aa12.18□□□□□ -0.46
UBR4-207ENST00000425413 ATP11AP98196 1134 aa12.18□□□□□ -0.46
UBR4-207ENST00000425413 GRIK4Q16099 956 aa12.18□□□□□ -0.46
UBR4-207ENST00000425413 OR6B2Q6IFH4 312 aa12.18□□□□□ -0.46
UBR4-207ENST00000425413 XYLT1Q86Y38 959 aa12.18□□□□□ -0.46
UBR4-207ENST00000425413 ANKMY2Q8IV38 441 aa12.18□□□□□ -0.46
UBR4-207ENST00000425413 SRRM1Q8IYB3 904 aaKnown RBP12.18□□□□□ -0.46
UBR4-207ENST00000425413 LRRC34Q8IZ02 419 aa12.18□□□□□ -0.46
UBR4-207ENST00000425413 ACTL9Q8TC94 416 aa12.18□□□□□ -0.46
UBR4-207ENST00000425413 BRI3BPQ8WY22 251 aa12.18□□□□□ -0.46
UBR4-207ENST00000425413 SEC16BQ96JE7 1060 aa12.18□□□□□ -0.46
UBR4-207ENST00000425413 CDHR5Q9HBB8 845 aa12.18□□□□□ -0.46
UBR4-207ENST00000425413 HOMER3Q9NSC5 361 aa12.18□□□□□ -0.46
UBR4-207ENST00000425413 DPP3Q9NY33 737 aa12.18□□□□□ -0.46
UBR4-207ENST00000425413 PNMA3Q9UL41 463 aa12.18□□□□□ -0.46
UBR4-207ENST00000425413 PCDHGC3Q9UN70 934 aa12.18□□□□□ -0.46
UBR4-207ENST00000425413 HGSO14964 777 aaPredicted RBP12.17□□□□□ -0.46
UBR4-207ENST00000425413 MED7O43513 233 aa12.17□□□□□ -0.46
UBR4-207ENST00000425413 TSPAN1O60635 241 aa12.17□□□□□ -0.46
UBR4-207ENST00000425413 OTUD4Q01804 1114 aaKnown RBP12.17□□□□□ -0.46
UBR4-207ENST00000425413 MMRN1Q13201 1228 aa12.17□□□□□ -0.46
UBR4-207ENST00000425413 C15orf59Q2T9L4 293 aaPredicted RBP12.17□□□□□ -0.46
UBR4-207ENST00000425413 ERMARDQ5T6L9 678 aa12.17□□□□□ -0.46
UBR4-207ENST00000425413 SYDE1Q6ZW31 735 aaPredicted RBP12.17□□□□□ -0.46
UBR4-207ENST00000425413 SESTD1Q86VW0 696 aa12.17□□□□□ -0.46
UBR4-207ENST00000425413 KCTD6Q8NC69 237 aa12.17□□□□□ -0.46
UBR4-207ENST00000425413 CHMP6Q96FZ7 201 aa12.17□□□□□ -0.46
UBR4-207ENST00000425413 ACAP3Q96P50 834 aa12.17□□□□□ -0.46
UBR4-207ENST00000425413 CNOT10Q9H9A5 744 aaKnown RBP12.17□□□□□ -0.46
UBR4-207ENST00000425413 SNTG2Q9NY99 539 aa12.17□□□□□ -0.46
UBR4-207ENST00000425413 PPME1Q9Y570 386 aa12.17□□□□□ -0.46
UBR4-207ENST00000425413 SNX9Q9Y5X1 595 aa12.17□□□□□ -0.46
UBR4-207ENST00000425413 BRCA2P51587 3418 aa12.17□□□□□ -0.46
UBR4-207ENST00000425413 TMEM120BA0PK00 339 aa12.17□□□□□ -0.46
UBR4-207ENST00000425413 DYNC1LI2O43237 492 aaPredicted RBP12.17□□□□□ -0.46
UBR4-207ENST00000425413 CILPO75339 1184 aa12.17□□□□□ -0.46
UBR4-207ENST00000425413 MCF2P10911 925 aa12.17□□□□□ -0.46
UBR4-207ENST00000425413 MAGEA4P43358 317 aa12.17□□□□□ -0.46
UBR4-207ENST00000425413 TMED2Q15363 201 aa12.17□□□□□ -0.46
UBR4-207ENST00000425413 SPRED3Q2MJR0 410 aa12.17□□□□□ -0.46
UBR4-207ENST00000425413 LDLRAD1Q5T700 205 aa12.17□□□□□ -0.46
UBR4-207ENST00000425413 SCYL2Q6P3W7 929 aa12.17□□□□□ -0.46
UBR4-207ENST00000425413 ACOT1Q86TX2 421 aa12.17□□□□□ -0.46
UBR4-207ENST00000425413 RFX6Q8HWS3 928 aa12.17□□□□□ -0.46
UBR4-207ENST00000425413 OR6J1Q8NGC5 347 aa12.17□□□□□ -0.46
UBR4-207ENST00000425413 PPTC7Q8NI37 304 aa12.17□□□□□ -0.46
UBR4-207ENST00000425413 C18orf25Q96B23 403 aaPredicted RBP12.17□□□□□ -0.46
UBR4-207ENST00000425413 ADPGKQ9BRR6 497 aa12.17□□□□□ -0.46
UBR4-207ENST00000425413 BCO2Q9BYV7 579 aa12.17□□□□□ -0.46
UBR4-207ENST00000425413 FAM129AQ9BZQ8 928 aa12.17□□□□□ -0.46
UBR4-207ENST00000425413 ZNF518BQ9C0D4 1074 aa12.17□□□□□ -0.46
UBR4-207ENST00000425413 VPS37BQ9H9H4 285 aa12.17□□□□□ -0.46
UBR4-207ENST00000425413 GPATCH2LQ9NWQ4 482 aa12.17□□□□□ -0.46
UBR4-207ENST00000425413 GGT7Q9UJ14 662 aa12.17□□□□□ -0.46
UBR4-207ENST00000425413 SBF1O95248 1867 aa12.16□□□□□ -0.46
UBR4-207ENST00000425413 A0A0G2JMZ2 1700 aa12.16□□□□□ -0.46
UBR4-207ENST00000425413 SIGLEC16A6NMB1 481 aa12.16□□□□□ -0.46
UBR4-207ENST00000425413 E5RJQ4 531 aa12.16□□□□□ -0.46
UBR4-207ENST00000425413 CYP3A5P20815 502 aa12.16□□□□□ -0.46
UBR4-207ENST00000425413 MIPP30301 263 aa12.16□□□□□ -0.46
UBR4-207ENST00000425413 ZKSCAN8Q15776 578 aaPredicted RBP12.16□□□□□ -0.46
UBR4-207ENST00000425413 NPNTQ6UXI9 565 aa12.16□□□□□ -0.46
UBR4-207ENST00000425413 ZC3H18Q86VM9 953 aaKnown RBP12.16□□□□□ -0.46
UBR4-207ENST00000425413 ZBED8Q8IZ13 594 aa12.16□□□□□ -0.46
UBR4-207ENST00000425413 C7orf31Q8N865 590 aa12.16□□□□□ -0.46
UBR4-207ENST00000425413 ATXN2LQ8WWM7 1075 aaKnown RBP12.16□□□□□ -0.46
UBR4-207ENST00000425413 KAT2BQ92831 832 aa12.16□□□□□ -0.46
UBR4-207ENST00000425413 OSMRQ99650 979 aa12.16□□□□□ -0.46
UBR4-207ENST00000425413 PAIP2Q9BPZ3 127 aaKnown RBP12.16□□□□□ -0.46
UBR4-207ENST00000425413 ELAC2Q9BQ52 826 aaKnown RBP12.16□□□□□ -0.46
UBR4-207ENST00000425413 EIF2AQ9BY44 585 aaKnown RBP12.16□□□□□ -0.46
UBR4-207ENST00000425413 KLK14Q9P0G3 267 aa12.16□□□□□ -0.46
UBR4-207ENST00000425413 STRIP2Q9ULQ0 834 aa12.16□□□□□ -0.46
UBR4-207ENST00000425413 DRD4P21917 467 aa12.16□□□□□ -0.46
UBR4-207ENST00000425413 AKAP5P24588 427 aa12.16□□□□□ -0.46
UBR4-207ENST00000425413 VCPP55072 806 aaKnown RBP12.16□□□□□ -0.46
UBR4-207ENST00000425413 SLC25A11Q02978 314 aaKnown RBP12.16□□□□□ -0.46
UBR4-207ENST00000425413 MARCH8Q5T0T0 291 aa12.16□□□□□ -0.46
UBR4-207ENST00000425413 GPR142Q7Z601 462 aa12.16□□□□□ -0.46
UBR4-207ENST00000425413 CCDC13Q8IYE1 715 aa12.16□□□□□ -0.46
UBR4-207ENST00000425413 CACNA2D3Q8IZS8 1091 aa12.16□□□□□ -0.46
UBR4-207ENST00000425413 CCDC33Q8N5R6 958 aa12.16□□□□□ -0.46
UBR4-207ENST00000425413 ALLCQ8N6M5 410 aa12.16□□□□□ -0.46
UBR4-207ENST00000425413 MAGEB2O15479 319 aa12.15□□□□□ -0.46
UBR4-207ENST00000425413 IBSPP21815 317 aaPredicted RBP12.15□□□□□ -0.46
UBR4-207ENST00000425413 CDH5P33151 784 aaPredicted RBP12.15□□□□□ -0.46
UBR4-207ENST00000425413 MPP2Q14168 576 aa12.15□□□□□ -0.46
UBR4-207ENST00000425413 HADHQ16836 314 aaKnown RBP12.15□□□□□ -0.46
UBR4-207ENST00000425413 GKAP1Q5VSY0 366 aaPredicted RBP12.15□□□□□ -0.46
UBR4-207ENST00000425413 HIBCHQ6NVY1 386 aaPredicted RBP12.15□□□□□ -0.46
UBR4-207ENST00000425413 PPP1R2P3Q6NXS1 205 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms