RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 ZNF720Q7Z2F6 126 aa13.17□□□□□ -0.3
HLA-DQB3-203ENST00000425319 BRAPQ7Z569 592 aa13.17□□□□□ -0.3
HLA-DQB3-203ENST00000425319 LRRTM3Q86VH5 581 aa13.17□□□□□ -0.3
HLA-DQB3-203ENST00000425319 LRRC52Q8N7C0 313 aa13.17□□□□□ -0.3
HLA-DQB3-203ENST00000425319 ANKRD36BP1Q96IX9 119 aa13.17□□□□□ -0.3
HLA-DQB3-203ENST00000425319 FAM213AQ9BRX8 229 aa13.17□□□□□ -0.3
HLA-DQB3-203ENST00000425319 EDEM2Q9BV94 578 aa13.17□□□□□ -0.3
HLA-DQB3-203ENST00000425319 SLC32A1Q9H598 525 aa13.17□□□□□ -0.3
HLA-DQB3-203ENST00000425319 POLMQ9NP87 494 aaPredicted RBP13.17□□□□□ -0.3
HLA-DQB3-203ENST00000425319 HPS4Q9NQG7 708 aa13.17□□□□□ -0.3
HLA-DQB3-203ENST00000425319 TRPM5Q9NZQ8 1165 aa13.17□□□□□ -0.3
HLA-DQB3-203ENST00000425319 STK17AQ9UEE5 414 aa13.17□□□□□ -0.3
HLA-DQB3-203ENST00000425319 ITGA11Q9UKX5 1188 aa13.17□□□□□ -0.3
HLA-DQB3-203ENST00000425319 STYXL1Q9Y6J8 313 aa13.17□□□□□ -0.3
HLA-DQB3-203ENST00000425319 ZNF292O60281 2723 aa13.17□□□□□ -0.3
HLA-DQB3-203ENST00000425319 NOTCH4Q99466 2003 aa13.17□□□□□ -0.3
HLA-DQB3-203ENST00000425319 CACNA1AO00555 2505 aa13.16□□□□□ -0.3
HLA-DQB3-203ENST00000425319 NCANO14594 1321 aa13.16□□□□□ -0.3
HLA-DQB3-203ENST00000425319 COL4A3Q01955 1670 aa13.16□□□□□ -0.3
HLA-DQB3-203ENST00000425319 FAM189A1O60320 539 aa13.16□□□□□ -0.3
HLA-DQB3-203ENST00000425319 TNNC2P02585 160 aa13.16□□□□□ -0.3
HLA-DQB3-203ENST00000425319 HMGA1P17096 107 aaKnown RBP13.16□□□□□ -0.3
HLA-DQB3-203ENST00000425319 PLCG1P19174 1290 aa13.16□□□□□ -0.3
HLA-DQB3-203ENST00000425319 PMLP29590 882 aa13.16□□□□□ -0.3
HLA-DQB3-203ENST00000425319 LMAN2Q12907 356 aa13.16□□□□□ -0.3
HLA-DQB3-203ENST00000425319 ZC2HC1CQ53FD0 456 aaPredicted RBP13.16□□□□□ -0.3
HLA-DQB3-203ENST00000425319 INTS6LQ5JSJ4 861 aaKnown RBP13.16□□□□□ -0.3
HLA-DQB3-203ENST00000425319 RRAGBQ5VZM2 374 aa13.16□□□□□ -0.3
HLA-DQB3-203ENST00000425319 PSAPL1Q6NUJ1 521 aa13.16□□□□□ -0.3
HLA-DQB3-203ENST00000425319 DYMQ7RTS9 669 aa13.16□□□□□ -0.3
HLA-DQB3-203ENST00000425319 TTC30AQ86WT1 665 aa13.16□□□□□ -0.3
HLA-DQB3-203ENST00000425319 TOP6BLQ8N6T0 577 aa13.16□□□□□ -0.3
HLA-DQB3-203ENST00000425319 SPACA7Q96KW9 195 aa13.16□□□□□ -0.3
HLA-DQB3-203ENST00000425319 MYRFLQ96LU7 910 aa13.16□□□□□ -0.3
HLA-DQB3-203ENST00000425319 HHIPQ96QV1 700 aa13.16□□□□□ -0.3
HLA-DQB3-203ENST00000425319 NUSAP1Q9BXS6 441 aaKnown RBP13.16□□□□□ -0.3
HLA-DQB3-203ENST00000425319 LRRC27Q9C0I9 530 aa13.16□□□□□ -0.3
HLA-DQB3-203ENST00000425319 DUSP15Q9H1R2 295 aaPredicted RBP13.16□□□□□ -0.3
HLA-DQB3-203ENST00000425319 RBAKQ9NYW8 714 aaPredicted RBP13.16□□□□□ -0.3
HLA-DQB3-203ENST00000425319 GTF3C4Q9UKN8 822 aa13.16□□□□□ -0.3
HLA-DQB3-203ENST00000425319 CIZ1Q9ULV3 898 aaPredicted RBP13.16□□□□□ -0.3
HLA-DQB3-203ENST00000425319 SNX9Q9Y5X1 595 aa13.16□□□□□ -0.3
HLA-DQB3-203ENST00000425319 BCLAF3A2AJT9 711 aaKnown RBP13.15□□□□□ -0.3
HLA-DQB3-203ENST00000425319 C4orf47A7E2U8 309 aa13.15□□□□□ -0.3
HLA-DQB3-203ENST00000425319 TM4SF5O14894 197 aa13.15□□□□□ -0.3
HLA-DQB3-203ENST00000425319 NOL4O94818 638 aa13.15□□□□□ -0.3
HLA-DQB3-203ENST00000425319 GCNT3O95395 438 aa13.15□□□□□ -0.3
HLA-DQB3-203ENST00000425319 ITGB3P05106 788 aa13.15□□□□□ -0.3
HLA-DQB3-203ENST00000425319 PROS1P07225 676 aa13.15□□□□□ -0.3
HLA-DQB3-203ENST00000425319 ARSAP15289 507 aa13.15□□□□□ -0.3
HLA-DQB3-203ENST00000425319 GARTP22102 1010 aa13.15□□□□□ -0.3
HLA-DQB3-203ENST00000425319 CYP2F1P24903 491 aa13.15□□□□□ -0.3
HLA-DQB3-203ENST00000425319 POLR2BP30876 1174 aaKnown RBP13.15□□□□□ -0.3
HLA-DQB3-203ENST00000425319 GRIK1P39086 918 aa13.15□□□□□ -0.3
HLA-DQB3-203ENST00000425319 CDR1P51861 262 aa13.15□□□□□ -0.3
HLA-DQB3-203ENST00000425319 ATXN3P54252 364 aaPredicted RBP13.15□□□□□ -0.3
HLA-DQB3-203ENST00000425319 MRPS21P82921 87 aaKnown RBP13.15□□□□□ -0.3
HLA-DQB3-203ENST00000425319 CFAP221Q4G0U5 840 aa13.15□□□□□ -0.3
HLA-DQB3-203ENST00000425319 HSF5Q4G112 596 aaPredicted RBP13.15□□□□□ -0.3
HLA-DQB3-203ENST00000425319 VSTM1Q6UX27 236 aa13.15□□□□□ -0.3
HLA-DQB3-203ENST00000425319 CYP2U1Q7Z449 544 aa13.15□□□□□ -0.3
HLA-DQB3-203ENST00000425319 DDX42Q86XP3 938 aaKnown RBP eCLIP13.15□□□□□ -0.3
HLA-DQB3-203ENST00000425319 PDCL2Q8N4E4 241 aa13.15□□□□□ -0.3
HLA-DQB3-203ENST00000425319 KIAA1958Q8N8K9 716 aa13.15□□□□□ -0.3
HLA-DQB3-203ENST00000425319 ARL14EPQ8N8R7 260 aaPredicted RBP13.15□□□□□ -0.3
HLA-DQB3-203ENST00000425319 SH3RF2Q8TEC5 729 aa13.15□□□□□ -0.3
HLA-DQB3-203ENST00000425319 TMEM9BQ9NQ34 198 aa13.15□□□□□ -0.3
HLA-DQB3-203ENST00000425319 GDAP2Q9NXN4 497 aa13.15□□□□□ -0.3
HLA-DQB3-203ENST00000425319 CCL26Q9Y258 94 aa13.15□□□□□ -0.3
HLA-DQB3-203ENST00000425319 TMEM8BA6NDV4 472 aa13.14□□□□□ -0.31
HLA-DQB3-203ENST00000425319 TRIM66O15016 1216 aa13.14□□□□□ -0.31
HLA-DQB3-203ENST00000425319 PRPF6O94906 941 aaKnown RBP13.14□□□□□ -0.31
HLA-DQB3-203ENST00000425319 SEC24BO95487 1268 aa13.14□□□□□ -0.31
HLA-DQB3-203ENST00000425319 ABL1P00519 1130 aa13.14□□□□□ -0.31
HLA-DQB3-203ENST00000425319 CEACAM1P13688 526 aa13.14□□□□□ -0.31
HLA-DQB3-203ENST00000425319 IDEP14735 1019 aa13.14□□□□□ -0.31
HLA-DQB3-203ENST00000425319 PDCP20941 246 aa13.14□□□□□ -0.31
HLA-DQB3-203ENST00000425319 MAGEA11P43364 429 aa13.14□□□□□ -0.31
HLA-DQB3-203ENST00000425319 DHPSP49366 369 aaPredicted RBP13.14□□□□□ -0.31
HLA-DQB3-203ENST00000425319 SF3A1Q15459 793 aaKnown RBP13.14□□□□□ -0.31
HLA-DQB3-203ENST00000425319 EOGTQ5NDL2 527 aa13.14□□□□□ -0.31
HLA-DQB3-203ENST00000425319 L1TD1Q5T7N2 865 aaKnown RBP13.14□□□□□ -0.31
HLA-DQB3-203ENST00000425319 BTBD8Q5XKL5 378 aa13.14□□□□□ -0.31
HLA-DQB3-203ENST00000425319 LPCAT2Q7L5N7 544 aa13.14□□□□□ -0.31
HLA-DQB3-203ENST00000425319 ADGRF2Q8IZF7 708 aa13.14□□□□□ -0.31
HLA-DQB3-203ENST00000425319 PGBD3Q8N328 593 aa13.14□□□□□ -0.31
HLA-DQB3-203ENST00000425319 STKLD1Q8NE28 680 aa13.14□□□□□ -0.31
HLA-DQB3-203ENST00000425319 CHFRQ96EP1 664 aa13.14□□□□□ -0.31
HLA-DQB3-203ENST00000425319 CYP2S1Q96SQ9 504 aa13.14□□□□□ -0.31
HLA-DQB3-203ENST00000425319 MMS19Q96T76 1030 aa13.14□□□□□ -0.31
HLA-DQB3-203ENST00000425319 KIAA1586Q9HCI6 787 aa13.14□□□□□ -0.31
HLA-DQB3-203ENST00000425319 BLOC1S4Q9NUP1 217 aa13.14□□□□□ -0.31
HLA-DQB3-203ENST00000425319 C2orf42Q9NWW7 574 aa13.14□□□□□ -0.31
HLA-DQB3-203ENST00000425319 BCCIPQ9P287 314 aaKnown RBP eCLIP13.14□□□□□ -0.31
HLA-DQB3-203ENST00000425319 TBC1D14Q9P2M4 693 aa13.14□□□□□ -0.31
HLA-DQB3-203ENST00000425319 CDH9Q9ULB4 789 aa13.14□□□□□ -0.31
HLA-DQB3-203ENST00000425319 MYO15AQ9UKN7 3530 aa13.13□□□□□ -0.31
HLA-DQB3-203ENST00000425319 ZNF233A6NK53 670 aa13.13□□□□□ -0.31
HLA-DQB3-203ENST00000425319 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.13□□□□□ -0.31
HLA-DQB3-203ENST00000425319 APODP05090 189 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms