RNA–Protein interactions for RNA: ENST00000425208.6

HMGA2-205, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-205ENST00000425208 USP15Q9Y4E8 981 aaPredicted RBP23.33■■□□□ 1.33
HMGA2-205ENST00000425208 MBTPS2O43462 519 aa23.33■■□□□ 1.32
HMGA2-205ENST00000425208 HAPLN1P10915 354 aaPredicted RBP23.33■■□□□ 1.32
HMGA2-205ENST00000425208 MFAP3P55082 362 aa23.33■■□□□ 1.32
HMGA2-205ENST00000425208 MRPS5P82675 430 aaKnown RBP23.33■■□□□ 1.32
HMGA2-205ENST00000425208 UBXN1Q04323 297 aa23.33■■□□□ 1.32
HMGA2-205ENST00000425208 KCNMA1Q12791 1236 aa23.33■■□□□ 1.32
HMGA2-205ENST00000425208 ATAT1Q5SQI0 421 aa23.33■■□□□ 1.32
HMGA2-205ENST00000425208 PTCRAQ6ISU1 281 aaPredicted RBP23.33■■□□□ 1.32
HMGA2-205ENST00000425208 ELMOD1Q8N336 334 aa23.33■■□□□ 1.32
HMGA2-205ENST00000425208 UBR7Q8N806 425 aa23.33■■□□□ 1.32
HMGA2-205ENST00000425208 TMEM176AQ96HP8 235 aa23.33■■□□□ 1.32
HMGA2-205ENST00000425208 KREMEN1Q96MU8 473 aa23.33■■□□□ 1.32
HMGA2-205ENST00000425208 LPIN3Q9BQK8 851 aa23.33■■□□□ 1.32
HMGA2-205ENST00000425208 ATP8B3O60423 1300 aa23.32■■□□□ 1.32
HMGA2-205ENST00000425208 MYH10P35580 1976 aa23.32■■□□□ 1.32
HMGA2-205ENST00000425208 SERPINC1P01008 464 aa23.32■■□□□ 1.32
HMGA2-205ENST00000425208 CYP2F1P24903 491 aa23.32■■□□□ 1.32
HMGA2-205ENST00000425208 MTHFRP42898 656 aa23.32■■□□□ 1.32
HMGA2-205ENST00000425208 RAD23BP54727 409 aa23.32■■□□□ 1.32
HMGA2-205ENST00000425208 EPHB3P54753 998 aa23.32■■□□□ 1.32
HMGA2-205ENST00000425208 APBA1Q02410 837 aa23.32■■□□□ 1.32
HMGA2-205ENST00000425208 GJB7Q6PEY0 223 aa23.32■■□□□ 1.32
HMGA2-205ENST00000425208 TMEM270Q6UE05 265 aa23.32■■□□□ 1.32
HMGA2-205ENST00000425208 VSTM1Q6UX27 236 aa23.32■■□□□ 1.32
HMGA2-205ENST00000425208 SUSD6Q92537 303 aa23.32■■□□□ 1.32
HMGA2-205ENST00000425208 NECTIN4Q96NY8 510 aa23.32■■□□□ 1.32
HMGA2-205ENST00000425208 LSM14BQ9BX40 385 aaKnown RBP23.32■■□□□ 1.32
HMGA2-205ENST00000425208 SIX2Q9NPC8 291 aa23.32■■□□□ 1.32
HMGA2-205ENST00000425208 PCDHB4Q9Y5E5 795 aa23.32■■□□□ 1.32
HMGA2-205ENST00000425208 GRXCR2A6NFK2 248 aa23.31■■□□□ 1.32
HMGA2-205ENST00000425208 SOAT2O75908 522 aa23.31■■□□□ 1.32
HMGA2-205ENST00000425208 ACO1P21399 889 aaKnown RBP23.31■■□□□ 1.32
HMGA2-205ENST00000425208 RFX1P22670 979 aa23.31■■□□□ 1.32
HMGA2-205ENST00000425208 BDNFP23560 247 aa23.31■■□□□ 1.32
HMGA2-205ENST00000425208 MAGEA11P43364 429 aa23.31■■□□□ 1.32
HMGA2-205ENST00000425208 CBX2Q14781 532 aaPredicted RBP23.31■■□□□ 1.32
HMGA2-205ENST00000425208 C12orf29Q8N999 325 aa23.31■■□□□ 1.32
HMGA2-205ENST00000425208 SLC4A11Q8NBS3 891 aa23.31■■□□□ 1.32
HMGA2-205ENST00000425208 FEZF2Q8TBJ5 459 aa23.31■■□□□ 1.32
HMGA2-205ENST00000425208 MED10Q9BTT4 135 aa23.31■■□□□ 1.32
HMGA2-205ENST00000425208 B3GNT5Q9BYG0 378 aa23.31■■□□□ 1.32
HMGA2-205ENST00000425208 FAM49BQ9NUQ9 324 aa23.31■■□□□ 1.32
HMGA2-205ENST00000425208 CDH22Q9UJ99 828 aa23.31■■□□□ 1.32
HMGA2-205ENST00000425208 DOCK6Q96HP0 2047 aa23.3■■□□□ 1.32
HMGA2-205ENST00000425208 CCDC130P13994 396 aa23.3■■□□□ 1.32
HMGA2-205ENST00000425208 KCNQ1P51787 676 aa23.3■■□□□ 1.32
HMGA2-205ENST00000425208 RPL10AP62906 217 aaKnown RBP23.3■■□□□ 1.32
HMGA2-205ENST00000425208 VEPH1Q14D04 833 aa23.3■■□□□ 1.32
HMGA2-205ENST00000425208 IQCEQ6IPM2 695 aa23.3■■□□□ 1.32
HMGA2-205ENST00000425208 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.3■■□□□ 1.32
HMGA2-205ENST00000425208 RNF214Q8ND24 703 aa23.3■■□□□ 1.32
HMGA2-205ENST00000425208 HEXIM2Q96MH2 286 aaKnown RBP23.3■■□□□ 1.32
HMGA2-205ENST00000425208 ZNF518BQ9C0D4 1074 aa23.3■■□□□ 1.32
HMGA2-205ENST00000425208 PLCB1Q9NQ66 1216 aa23.3■■□□□ 1.32
HMGA2-205ENST00000425208 DENND4AQ7Z401 1863 aa23.29■■□□□ 1.32
HMGA2-205ENST00000425208 CLDN5O00501 218 aa23.29■■□□□ 1.32
HMGA2-205ENST00000425208 ATF6P18850 670 aa23.29■■□□□ 1.32
HMGA2-205ENST00000425208 SYCP1Q15431 976 aa23.29■■□□□ 1.32
HMGA2-205ENST00000425208 SMAD2Q15796 467 aaKnown RBP23.29■■□□□ 1.32
HMGA2-205ENST00000425208 ARHGAP44Q17R89 818 aa23.29■■□□□ 1.32
HMGA2-205ENST00000425208 KLHDC7AQ5VTJ3 777 aa23.29■■□□□ 1.32
HMGA2-205ENST00000425208 FAM35AQ86V20 835 aa23.29■■□□□ 1.32
HMGA2-205ENST00000425208 SCN4BQ8IWT1 228 aa23.29■■□□□ 1.32
HMGA2-205ENST00000425208 FUKQ8N0W3 1084 aa23.29■■□□□ 1.32
HMGA2-205ENST00000425208 SLC2A14Q8TDB8 520 aa23.29■■□□□ 1.32
HMGA2-205ENST00000425208 CYFIP2Q96F07 1278 aa23.29■■□□□ 1.32
HMGA2-205ENST00000425208 ZNF512Q96ME7 567 aaPredicted RBP23.29■■□□□ 1.32
HMGA2-205ENST00000425208 PCMTD1Q96MG8 357 aaPredicted RBP23.29■■□□□ 1.32
HMGA2-205ENST00000425208 ASB2Q96Q27 587 aa23.29■■□□□ 1.32
HMGA2-205ENST00000425208 ERGIC2Q96RQ1 377 aa23.29■■□□□ 1.32
HMGA2-205ENST00000425208 RTN4Q9NQC3 1192 aaKnown RBP23.29■■□□□ 1.32
HMGA2-205ENST00000425208 CEP72Q9P209 647 aa23.29■■□□□ 1.32
HMGA2-205ENST00000425208 DNAJC12Q9UKB3 198 aa23.29■■□□□ 1.32
HMGA2-205ENST00000425208 ASB3Q9Y575 518 aa23.29■■□□□ 1.32
HMGA2-205ENST00000425208 C5orf42Q9H799 3197 aa23.28■■□□□ 1.32
HMGA2-205ENST00000425208 A0A1B0GTH6 734 aa23.28■■□□□ 1.32
HMGA2-205ENST00000425208 TRIM66O15016 1216 aa23.28■■□□□ 1.32
HMGA2-205ENST00000425208 PAEPP09466 180 aa23.28■■□□□ 1.32
HMGA2-205ENST00000425208 KRT5P13647 590 aa23.28■■□□□ 1.32
HMGA2-205ENST00000425208 GRIK1P39086 918 aa23.28■■□□□ 1.32
HMGA2-205ENST00000425208 FANCCQ00597 558 aa23.28■■□□□ 1.32
HMGA2-205ENST00000425208 DDR2Q16832 855 aa23.28■■□□□ 1.32
HMGA2-205ENST00000425208 DPY19L2P1Q6NXN4 242 aa23.28■■□□□ 1.32
HMGA2-205ENST00000425208 GRASPQ7Z6J2 395 aaPredicted RBP23.28■■□□□ 1.32
HMGA2-205ENST00000425208 ITIH5Q86UX2 942 aa23.28■■□□□ 1.32
HMGA2-205ENST00000425208 RBBP8NLQ8NC74 664 aaPredicted RBP23.28■■□□□ 1.32
HMGA2-205ENST00000425208 SMARCD1Q96GM5 515 aa23.28■■□□□ 1.32
HMGA2-205ENST00000425208 FAM207AQ9NSI2 230 aaPredicted RBP23.28■■□□□ 1.32
HMGA2-205ENST00000425208 SIK3Q9Y2K2 1263 aa23.28■■□□□ 1.32
HMGA2-205ENST00000425208 CLUHO75153 1309 aa23.27■■□□□ 1.32
HMGA2-205ENST00000425208 IL9P15248 144 aa23.27■■□□□ 1.32
HMGA2-205ENST00000425208 UCHL3P15374 230 aa23.27■■□□□ 1.32
HMGA2-205ENST00000425208 PTPN2P17706 415 aa23.27■■□□□ 1.32
HMGA2-205ENST00000425208 ANXA13P27216 316 aa23.27■■□□□ 1.32
HMGA2-205ENST00000425208 GPR15P49685 360 aa23.27■■□□□ 1.32
HMGA2-205ENST00000425208 KLK7P49862 253 aa23.27■■□□□ 1.32
HMGA2-205ENST00000425208 PAQR9Q6ZVX9 377 aa23.27■■□□□ 1.32
HMGA2-205ENST00000425208 PSMG2Q969U7 264 aa23.27■■□□□ 1.32
HMGA2-205ENST00000425208 HNRNPABQ99729 332 aaKnown RBP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms