RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 OR6C75A6NL08 312 aa6.88□□□□□ -1.31
SDCBP-203ENST00000424270 GOLGA8AA7E2F4 631 aa6.88□□□□□ -1.31
SDCBP-203ENST00000424270 GOLGA8BA8MQT2 603 aa6.88□□□□□ -1.31
SDCBP-203ENST00000424270 ZBTB43O43298 467 aa6.88□□□□□ -1.31
SDCBP-203ENST00000424270 ZNF883P0CG24 379 aa6.88□□□□□ -1.31
SDCBP-203ENST00000424270 HOXB2P14652 356 aa6.88□□□□□ -1.31
SDCBP-203ENST00000424270 GLRA2P23416 452 aa6.88□□□□□ -1.31
SDCBP-203ENST00000424270 RPL9P32969 192 aaKnown RBP6.88□□□□□ -1.31
SDCBP-203ENST00000424270 WASP42768 502 aa6.88□□□□□ -1.31
SDCBP-203ENST00000424270 TUFMP49411 452 aaKnown RBP6.88□□□□□ -1.31
SDCBP-203ENST00000424270 NLRP5P59047 1200 aa6.88□□□□□ -1.31
SDCBP-203ENST00000424270 NFKB2Q00653 900 aa6.88□□□□□ -1.31
SDCBP-203ENST00000424270 POU5F1BQ06416 359 aa6.88□□□□□ -1.31
SDCBP-203ENST00000424270 VAC14Q08AM6 782 aa6.88□□□□□ -1.31
SDCBP-203ENST00000424270 SCRN1Q12765 414 aa6.88□□□□□ -1.31
SDCBP-203ENST00000424270 USP4Q13107 963 aa6.88□□□□□ -1.31
SDCBP-203ENST00000424270 RESTQ13127 1097 aa6.88□□□□□ -1.31
SDCBP-203ENST00000424270 MRPL58Q14197 206 aaKnown RBP6.88□□□□□ -1.31
SDCBP-203ENST00000424270 CTTNQ14247 550 aaKnown RBP6.88□□□□□ -1.31
SDCBP-203ENST00000424270 TBC1D25Q3MII6 688 aa6.88□□□□□ -1.31
SDCBP-203ENST00000424270 HSF5Q4G112 596 aaPredicted RBP6.88□□□□□ -1.31
SDCBP-203ENST00000424270 HES3Q5TGS1 186 aa6.88□□□□□ -1.31
SDCBP-203ENST00000424270 KIAA1614Q5VZ46 1190 aa6.88□□□□□ -1.31
SDCBP-203ENST00000424270 CENPPQ6IPU0 288 aa6.88□□□□□ -1.31
SDCBP-203ENST00000424270 CD300LGQ6UXG3 332 aa6.88□□□□□ -1.31
SDCBP-203ENST00000424270 USP49Q70CQ1 688 aa6.88□□□□□ -1.31
SDCBP-203ENST00000424270 TTC9BQ8N6N2 239 aa6.88□□□□□ -1.31
SDCBP-203ENST00000424270 DEPTORQ8TB45 409 aa6.88□□□□□ -1.31
SDCBP-203ENST00000424270 BAHD1Q8TBE0 780 aaPredicted RBP6.88□□□□□ -1.31
SDCBP-203ENST00000424270 RUFY2Q8WXA3 655 aa6.88□□□□□ -1.31
SDCBP-203ENST00000424270 MARVELD3Q96A59 401 aa6.88□□□□□ -1.31
SDCBP-203ENST00000424270 SUSD3Q96L08 255 aa6.88□□□□□ -1.31
SDCBP-203ENST00000424270 ACAP3Q96P50 834 aa6.88□□□□□ -1.31
SDCBP-203ENST00000424270 NACC1Q96RE7 527 aa6.88□□□□□ -1.31
SDCBP-203ENST00000424270 PNKPQ96T60 521 aa6.88□□□□□ -1.31
SDCBP-203ENST00000424270 NFKBIZQ9BYH8 718 aa6.88□□□□□ -1.31
SDCBP-203ENST00000424270 C2orf40Q9H1Z8 148 aa6.88□□□□□ -1.31
SDCBP-203ENST00000424270 CRISPLD1Q9H336 500 aa6.88□□□□□ -1.31
SDCBP-203ENST00000424270 ZSWIM4Q9H7M6 989 aa6.88□□□□□ -1.31
SDCBP-203ENST00000424270 GPRC5CQ9NQ84 441 aa6.88□□□□□ -1.31
SDCBP-203ENST00000424270 ARHGEF4Q9NR80 690 aa6.88□□□□□ -1.31
SDCBP-203ENST00000424270 GMIPQ9P107 970 aa6.88□□□□□ -1.31
SDCBP-203ENST00000424270 USP20Q9Y2K6 914 aa6.88□□□□□ -1.31
SDCBP-203ENST00000424270 TAF6LQ9Y6J9 622 aa6.88□□□□□ -1.31
SDCBP-203ENST00000424270 NUP210Q8TEM1 1887 aaPredicted RBP6.87□□□□□ -1.31
SDCBP-203ENST00000424270 PTPN13Q12923 2485 aa6.87□□□□□ -1.31
SDCBP-203ENST00000424270 TRAV19A0A0A6YYK7 116 aa6.87□□□□□ -1.31
SDCBP-203ENST00000424270 A0A1B0GVT2 93 aa6.87□□□□□ -1.31
SDCBP-203ENST00000424270 MTMR11A4FU01 709 aa6.87□□□□□ -1.31
SDCBP-203ENST00000424270 TBC1D3BA6NDS4 549 aa6.87□□□□□ -1.31
SDCBP-203ENST00000424270 ANTXRLA6NF34 631 aa6.87□□□□□ -1.31
SDCBP-203ENST00000424270 BTBD18B2RXH4 712 aa6.87□□□□□ -1.31
SDCBP-203ENST00000424270 EML1O00423 815 aa6.87□□□□□ -1.31
SDCBP-203ENST00000424270 BCAT2O15382 392 aaPredicted RBP6.87□□□□□ -1.31
SDCBP-203ENST00000424270 USO1O60763 962 aaKnown RBP6.87□□□□□ -1.31
SDCBP-203ENST00000424270 RFPL3O75679 317 aa6.87□□□□□ -1.31
SDCBP-203ENST00000424270 DGAT1O75907 488 aa6.87□□□□□ -1.31
SDCBP-203ENST00000424270 KAT7O95251 611 aa6.87□□□□□ -1.31
SDCBP-203ENST00000424270 TDP2O95551 362 aa6.87□□□□□ -1.31
SDCBP-203ENST00000424270 USP17L7P0C7H9 530 aa6.87□□□□□ -1.31
SDCBP-203ENST00000424270 HARSP12081 509 aaKnown RBP6.87□□□□□ -1.31
SDCBP-203ENST00000424270 NCAM1P13591 858 aa6.87□□□□□ -1.31
SDCBP-203ENST00000424270 GABRG2P18507 467 aa6.87□□□□□ -1.31
SDCBP-203ENST00000424270 LIFRP42702 1097 aa6.87□□□□□ -1.31
SDCBP-203ENST00000424270 FOSBP53539 338 aa6.87□□□□□ -1.31
SDCBP-203ENST00000424270 IL9RQ01113 521 aa6.87□□□□□ -1.31
SDCBP-203ENST00000424270 FAM160A1Q05DH4 1040 aa6.87□□□□□ -1.31
SDCBP-203ENST00000424270 SOX4Q06945 474 aaPredicted RBP6.87□□□□□ -1.31
SDCBP-203ENST00000424270 GPR17Q13304 367 aa6.87□□□□□ -1.31
SDCBP-203ENST00000424270 DMP1Q13316 513 aaPredicted RBP6.87□□□□□ -1.31
SDCBP-203ENST00000424270 KCNB1Q14721 858 aa6.87□□□□□ -1.31
SDCBP-203ENST00000424270 TEAD4Q15561 434 aa6.87□□□□□ -1.31
SDCBP-203ENST00000424270 PFKFB3Q16875 520 aaPredicted RBP6.87□□□□□ -1.31
SDCBP-203ENST00000424270 EML3Q32P44 896 aa6.87□□□□□ -1.31
SDCBP-203ENST00000424270 Q4G0T1 1027 aa6.87□□□□□ -1.31
SDCBP-203ENST00000424270 SLC39A12Q504Y0 691 aa6.87□□□□□ -1.31
SDCBP-203ENST00000424270 EMC10Q5UCC4 262 aa6.87□□□□□ -1.31
SDCBP-203ENST00000424270 OVOS1Q6IE37 1185 aa6.87□□□□□ -1.31
SDCBP-203ENST00000424270 B4GALNT3Q6L9W6 998 aa6.87□□□□□ -1.31
SDCBP-203ENST00000424270 NUDT18Q6ZVK8 323 aa6.87□□□□□ -1.31
SDCBP-203ENST00000424270 DHX40Q8IX18 779 aaKnown RBP6.87□□□□□ -1.31
SDCBP-203ENST00000424270 C4orf19Q8IY42 314 aa6.87□□□□□ -1.31
SDCBP-203ENST00000424270 CCDC148Q8NFR7 591 aa6.87□□□□□ -1.31
SDCBP-203ENST00000424270 TBCKQ8TEA7 893 aa6.87□□□□□ -1.31
SDCBP-203ENST00000424270 C18orf25Q96B23 403 aaPredicted RBP6.87□□□□□ -1.31
SDCBP-203ENST00000424270 LIN37Q96GY3 246 aaPredicted RBP6.87□□□□□ -1.31
SDCBP-203ENST00000424270 DYDC2Q96IM9 177 aa6.87□□□□□ -1.31
SDCBP-203ENST00000424270 ZFRQ96KR1 1074 aaKnown RBP6.87□□□□□ -1.31
SDCBP-203ENST00000424270 MTMR9Q96QG7 549 aa6.87□□□□□ -1.31
SDCBP-203ENST00000424270 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.87□□□□□ -1.31
SDCBP-203ENST00000424270 ZMYND12Q9H0C1 365 aa6.87□□□□□ -1.31
SDCBP-203ENST00000424270 XPNPEP1Q9NQW7 623 aa6.87□□□□□ -1.31
SDCBP-203ENST00000424270 RGL1Q9NZL6 768 aa6.87□□□□□ -1.31
SDCBP-203ENST00000424270 DDX25Q9UHL0 483 aaKnown RBP6.87□□□□□ -1.31
SDCBP-203ENST00000424270 PCDHGB2Q9Y5G2 931 aa6.87□□□□□ -1.31
SDCBP-203ENST00000424270 PCDH15Q96QU1 1955 aa6.87□□□□□ -1.31
SDCBP-203ENST00000424270 ANKRD17O75179 2603 aaKnown RBP6.86□□□□□ -1.31
SDCBP-203ENST00000424270 ARID2Q68CP9 1835 aa6.86□□□□□ -1.31
SDCBP-203ENST00000424270 TNRC6BQ9UPQ9 1833 aaKnown RBP6.86□□□□□ -1.31
SDCBP-203ENST00000424270 ESYT2A0FGR8 921 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms