RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 GPD2P43304 727 aa9.28□□□□□ -0.92
SNCA-206ENST00000420646 ADCY1Q08828 1119 aa9.28□□□□□ -0.92
SNCA-206ENST00000420646 LONRF1Q17RB8 773 aa9.28□□□□□ -0.92
SNCA-206ENST00000420646 KATNAL2Q8IYT4 538 aa9.28□□□□□ -0.92
SNCA-206ENST00000420646 CCDC33Q8N5R6 958 aa9.28□□□□□ -0.92
SNCA-206ENST00000420646 ART4Q93070 314 aa9.28□□□□□ -0.92
SNCA-206ENST00000420646 PLVAPQ9BX97 442 aa9.28□□□□□ -0.92
SNCA-206ENST00000420646 CTNNAL1Q9UBT7 734 aa9.28□□□□□ -0.92
SNCA-206ENST00000420646 TSPAN16Q9UKR8 245 aa9.28□□□□□ -0.92
SNCA-206ENST00000420646 ZNF148Q9UQR1 794 aa9.28□□□□□ -0.92
SNCA-206ENST00000420646 PSTPIP1O43586 416 aa9.28□□□□□ -0.92
SNCA-206ENST00000420646 BANF1O75531 89 aa9.28□□□□□ -0.92
SNCA-206ENST00000420646 TOMM70O94826 608 aa9.28□□□□□ -0.92
SNCA-206ENST00000420646 CCT5P48643 541 aa9.28□□□□□ -0.92
SNCA-206ENST00000420646 FNTAP49354 379 aa9.28□□□□□ -0.92
SNCA-206ENST00000420646 GAD2Q05329 585 aa9.28□□□□□ -0.92
SNCA-206ENST00000420646 CALCOCO2Q13137 446 aa9.28□□□□□ -0.92
SNCA-206ENST00000420646 MAP2K5Q13163 448 aa9.28□□□□□ -0.92
SNCA-206ENST00000420646 MMRN1Q13201 1228 aa9.28□□□□□ -0.92
SNCA-206ENST00000420646 FAM102AQ5T9C2 384 aaPredicted RBP9.28□□□□□ -0.92
SNCA-206ENST00000420646 ZNF467Q7Z7K2 595 aaPredicted RBP9.28□□□□□ -0.92
SNCA-206ENST00000420646 CD302Q8IX05 232 aa9.28□□□□□ -0.92
SNCA-206ENST00000420646 C3orf20Q8ND61 904 aa9.28□□□□□ -0.92
SNCA-206ENST00000420646 C9orf72Q96LT7 481 aa9.28□□□□□ -0.92
SNCA-206ENST00000420646 MIS12Q9H081 205 aa9.28□□□□□ -0.92
SNCA-206ENST00000420646 ASB7Q9H672 318 aa9.28□□□□□ -0.92
SNCA-206ENST00000420646 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.28□□□□□ -0.92
SNCA-206ENST00000420646 PCDHGC3Q9UN70 934 aa9.28□□□□□ -0.92
SNCA-206ENST00000420646 SPTLC1O15269 473 aa9.27□□□□□ -0.92
SNCA-206ENST00000420646 LSM8O95777 96 aaKnown RBP9.27□□□□□ -0.92
SNCA-206ENST00000420646 PGK1P00558 417 aa9.27□□□□□ -0.92
SNCA-206ENST00000420646 F2P00734 622 aa9.27□□□□□ -0.92
SNCA-206ENST00000420646 CREB1P16220 341 aa9.27□□□□□ -0.92
SNCA-206ENST00000420646 TFE3P19532 575 aaPredicted RBP9.27□□□□□ -0.92
SNCA-206ENST00000420646 YWHAEP62258 255 aaKnown RBP9.27□□□□□ -0.92
SNCA-206ENST00000420646 RBP5P82980 135 aa9.27□□□□□ -0.92
SNCA-206ENST00000420646 MFSD10Q14728 455 aa9.27□□□□□ -0.92
SNCA-206ENST00000420646 PPP2R5EQ16537 467 aa9.27□□□□□ -0.92
SNCA-206ENST00000420646 MORN1Q5T089 497 aa9.27□□□□□ -0.92
SNCA-206ENST00000420646 DENND2CQ68D51 928 aa9.27□□□□□ -0.92
SNCA-206ENST00000420646 PMF1Q6P1K2 205 aa9.27□□□□□ -0.92
SNCA-206ENST00000420646 SPOCD1Q6ZMY3 1216 aa9.27□□□□□ -0.92
SNCA-206ENST00000420646 EIF1ADQ8N9N8 165 aaKnown RBP9.27□□□□□ -0.92
SNCA-206ENST00000420646 C12orf50Q8NA57 414 aaPredicted RBP9.27□□□□□ -0.92
SNCA-206ENST00000420646 ARRDC4Q8NCT1 418 aa9.27□□□□□ -0.92
SNCA-206ENST00000420646 EXD1Q8NHP7 514 aa9.27□□□□□ -0.92
SNCA-206ENST00000420646 CLEC4CQ8WTT0 213 aa9.27□□□□□ -0.92
SNCA-206ENST00000420646 GTF3C2Q8WUA4 911 aaPredicted RBP9.27□□□□□ -0.92
SNCA-206ENST00000420646 NDRG1Q92597 394 aaKnown RBP9.27□□□□□ -0.92
SNCA-206ENST00000420646 ZFP42Q96MM3 310 aa9.27□□□□□ -0.92
SNCA-206ENST00000420646 GPATCH2LQ9NWQ4 482 aa9.27□□□□□ -0.92
SNCA-206ENST00000420646 PARP2Q9UGN5 583 aa9.27□□□□□ -0.92
SNCA-206ENST00000420646 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.27□□□□□ -0.92
SNCA-206ENST00000420646 SLC45A1Q9Y2W3 748 aa9.27□□□□□ -0.92
SNCA-206ENST00000420646 PFKMP08237 780 aa9.27□□□□□ -0.93
SNCA-206ENST00000420646 CTSHP09668 335 aa9.27□□□□□ -0.93
SNCA-206ENST00000420646 C6orf222P0C671 652 aaPredicted RBP9.27□□□□□ -0.93
SNCA-206ENST00000420646 DRG2P55039 364 aaKnown RBP9.27□□□□□ -0.93
SNCA-206ENST00000420646 GDF10P55107 478 aa9.27□□□□□ -0.93
SNCA-206ENST00000420646 SOX4Q06945 474 aaPredicted RBP9.27□□□□□ -0.93
SNCA-206ENST00000420646 P3H1Q32P28 736 aa9.27□□□□□ -0.93
SNCA-206ENST00000420646 OR6B2Q6IFH4 312 aa9.27□□□□□ -0.93
SNCA-206ENST00000420646 ZNF365Q70YC5 407 aa9.27□□□□□ -0.93
SNCA-206ENST00000420646 IFNLR1Q8IU57 520 aaPredicted RBP9.27□□□□□ -0.93
SNCA-206ENST00000420646 OR6B3Q8NGW1 331 aa9.27□□□□□ -0.93
SNCA-206ENST00000420646 ATL2Q8NHH9 583 aa9.27□□□□□ -0.93
SNCA-206ENST00000420646 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.27□□□□□ -0.93
SNCA-206ENST00000420646 MRRFQ96E11 262 aaKnown RBP9.27□□□□□ -0.93
SNCA-206ENST00000420646 CFAP57Q96MR6 1250 aa9.27□□□□□ -0.93
SNCA-206ENST00000420646 CALN1Q9BXU9 219 aa9.27□□□□□ -0.93
SNCA-206ENST00000420646 GCOM2Q9BZD3 368 aaPredicted RBP9.27□□□□□ -0.93
SNCA-206ENST00000420646 CDC42EP4Q9H3Q1 356 aaKnown RBP9.27□□□□□ -0.93
SNCA-206ENST00000420646 SLC15A5A6NIM6 579 aa9.27□□□□□ -0.93
SNCA-206ENST00000420646 EIF3HO15372 352 aaKnown RBP eCLIP9.27□□□□□ -0.93
SNCA-206ENST00000420646 RIPK2O43353 540 aa9.27□□□□□ -0.93
SNCA-206ENST00000420646 SHOX2O60902 331 aaPredicted RBP9.27□□□□□ -0.93
SNCA-206ENST00000420646 GABBR2O75899 941 aa9.27□□□□□ -0.93
SNCA-206ENST00000420646 CCDC130P13994 396 aa9.27□□□□□ -0.93
SNCA-206ENST00000420646 MIPP30301 263 aa9.27□□□□□ -0.93
SNCA-206ENST00000420646 CDH5P33151 784 aaPredicted RBP9.27□□□□□ -0.93
SNCA-206ENST00000420646 CDKN2BP42772 138 aa9.27□□□□□ -0.93
SNCA-206ENST00000420646 ATXN1P54253 815 aaKnown RBP9.27□□□□□ -0.93
SNCA-206ENST00000420646 POU5F1BQ06416 359 aa9.27□□□□□ -0.93
SNCA-206ENST00000420646 TRIM32Q13049 653 aa9.27□□□□□ -0.93
SNCA-206ENST00000420646 CXCL17Q6UXB2 119 aa9.27□□□□□ -0.93
SNCA-206ENST00000420646 TTC30AQ86WT1 665 aa9.27□□□□□ -0.93
SNCA-206ENST00000420646 NETO2Q8NC67 525 aa9.27□□□□□ -0.93
SNCA-206ENST00000420646 WNT8BQ93098 351 aa9.27□□□□□ -0.93
SNCA-206ENST00000420646 PEBP4Q96S96 227 aa9.27□□□□□ -0.93
SNCA-206ENST00000420646 MTRF1LQ9UGC7 380 aaKnown RBP9.27□□□□□ -0.93
SNCA-206ENST00000420646 TBK1Q9UHD2 729 aa9.27□□□□□ -0.93
SNCA-206ENST00000420646 ANAPC5Q9UJX4 755 aa9.27□□□□□ -0.93
SNCA-206ENST00000420646 BARX2Q9UMQ3 279 aaPredicted RBP9.27□□□□□ -0.93
SNCA-206ENST00000420646 SCN4AP35499 1836 aa9.26□□□□□ -0.93
SNCA-206ENST00000420646 BPTFQ12830 3046 aa9.26□□□□□ -0.93
SNCA-206ENST00000420646 LOC102724159A0A0B4J2E5 919 aa9.26□□□□□ -0.93
SNCA-206ENST00000420646 SIGLEC16A6NMB1 481 aa9.26□□□□□ -0.93
SNCA-206ENST00000420646 CST8O60676 142 aa9.26□□□□□ -0.93
SNCA-206ENST00000420646 ATP2C2O75185 946 aa9.26□□□□□ -0.93
SNCA-206ENST00000420646 FGFR1P11362 822 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms