RNA–Protein interactions for RNA: ENST00000420515.1

FAAP20-207, Transcript of FA core complex associated protein 20, humanhuman

TSL 1 (best)

Gene FAAP20, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-207ENST00000420515 PABPC5Q96DU9 382 aaKnown RBP28.85■■■□□ 2.21
FAAP20-207ENST00000420515 FAM81BQ96LP2 452 aa28.85■■■□□ 2.21
FAAP20-207ENST00000420515 HEXIM2Q96MH2 286 aaKnown RBP28.85■■■□□ 2.21
FAAP20-207ENST00000420515 APOL5Q9BWW9 433 aa28.85■■■□□ 2.21
FAAP20-207ENST00000420515 F8VZ95 297 aa28.84■■■□□ 2.21
FAAP20-207ENST00000420515 BDNFP23560 247 aa28.84■■■□□ 2.21
FAAP20-207ENST00000420515 SKIV2LQ15477 1246 aaKnown RBP28.84■■■□□ 2.21
FAAP20-207ENST00000420515 NFE2Q16621 373 aaPredicted RBP28.84■■■□□ 2.21
FAAP20-207ENST00000420515 PPP1R26Q5T8A7 1209 aaPredicted RBP28.84■■■□□ 2.21
FAAP20-207ENST00000420515 TCEAL8Q8IYN2 117 aa28.84■■■□□ 2.21
FAAP20-207ENST00000420515 STKLD1Q8NE28 680 aa28.84■■■□□ 2.21
FAAP20-207ENST00000420515 SLC2A14Q8TDB8 520 aa28.84■■■□□ 2.21
FAAP20-207ENST00000420515 TFAP2BQ92481 460 aa28.84■■■□□ 2.21
FAAP20-207ENST00000420515 CASP10Q92851 521 aa28.84■■■□□ 2.21
FAAP20-207ENST00000420515 TTYH3Q9C0H2 523 aa28.84■■■□□ 2.21
FAAP20-207ENST00000420515 CDH22Q9UJ99 828 aa28.84■■■□□ 2.21
FAAP20-207ENST00000420515 RFX1P22670 979 aa28.84■■■□□ 2.21
FAAP20-207ENST00000420515 SYCE2Q6PIF2 218 aa28.84■■■□□ 2.21
FAAP20-207ENST00000420515 FAM35AQ86V20 835 aa28.84■■■□□ 2.21
FAAP20-207ENST00000420515 SPPL2BQ8TCT7 592 aa28.84■■■□□ 2.21
FAAP20-207ENST00000420515 SEPT5Q99719 369 aaPredicted RBP28.84■■■□□ 2.21
FAAP20-207ENST00000420515 STK33Q9BYT3 514 aa28.84■■■□□ 2.21
FAAP20-207ENST00000420515 TRIM5Q9C035 493 aa28.84■■■□□ 2.21
FAAP20-207ENST00000420515 PLEKHA4Q9H4M7 779 aa28.84■■■□□ 2.21
FAAP20-207ENST00000420515 PRDM6Q9NQX0 595 aa28.84■■■□□ 2.21
FAAP20-207ENST00000420515 YIPF1Q9Y548 306 aa28.84■■■□□ 2.21
FAAP20-207ENST00000420515 INSL5Q9Y5Q6 135 aa28.84■■■□□ 2.21
FAAP20-207ENST00000420515 PRRG1O14668 218 aa28.83■■■□□ 2.21
FAAP20-207ENST00000420515 CYP26A1O43174 497 aa28.83■■■□□ 2.21
FAAP20-207ENST00000420515 CBFA2T2O43439 604 aa28.83■■■□□ 2.21
FAAP20-207ENST00000420515 C1RP00736 705 aa28.83■■■□□ 2.21
FAAP20-207ENST00000420515 BRD2P25440 801 aaKnown RBP28.83■■■□□ 2.21
FAAP20-207ENST00000420515 ADORA2BP29275 332 aa28.83■■■□□ 2.21
FAAP20-207ENST00000420515 ELF1P32519 619 aa28.83■■■□□ 2.21
FAAP20-207ENST00000420515 SSTR3P32745 418 aaPredicted RBP28.83■■■□□ 2.21
FAAP20-207ENST00000420515 CLCN1P35523 988 aa28.83■■■□□ 2.21
FAAP20-207ENST00000420515 MAPRE1Q15691 268 aaKnown RBP28.83■■■□□ 2.21
FAAP20-207ENST00000420515 MGAT5BQ3V5L5 792 aa28.83■■■□□ 2.21
FAAP20-207ENST00000420515 CFAP221Q4G0U5 840 aa28.83■■■□□ 2.21
FAAP20-207ENST00000420515 SDHAF4Q5VUM1 108 aa28.83■■■□□ 2.21
FAAP20-207ENST00000420515 ANKRD54Q6NXT1 300 aa28.83■■■□□ 2.21
FAAP20-207ENST00000420515 CYFIP2Q96F07 1278 aa28.83■■■□□ 2.21
FAAP20-207ENST00000420515 CEP72Q9P209 647 aa28.83■■■□□ 2.21
FAAP20-207ENST00000420515 NOTCH4Q99466 2003 aa28.82■■■□□ 2.2
FAAP20-207ENST00000420515 ZMYND10O75800 440 aa28.82■■■□□ 2.2
FAAP20-207ENST00000420515 HAPLN1P10915 354 aaPredicted RBP28.82■■■□□ 2.2
FAAP20-207ENST00000420515 CD19P15391 556 aa28.82■■■□□ 2.2
FAAP20-207ENST00000420515 ATF6P18850 670 aa28.82■■■□□ 2.2
FAAP20-207ENST00000420515 TRIM21P19474 475 aaKnown RBP28.82■■■□□ 2.2
FAAP20-207ENST00000420515 SMARCB1Q12824 385 aa28.82■■■□□ 2.2
FAAP20-207ENST00000420515 LIN9Q5TKA1 542 aa28.82■■■□□ 2.2
FAAP20-207ENST00000420515 C4orf50Q6ZRC1 276 aa28.82■■■□□ 2.2
FAAP20-207ENST00000420515 FAM71AQ8IYT1 594 aa28.82■■■□□ 2.2
FAAP20-207ENST00000420515 C2orf15Q8WU43 125 aaKnown RBP28.82■■■□□ 2.2
FAAP20-207ENST00000420515 BAP1Q92560 729 aa28.82■■■□□ 2.2
FAAP20-207ENST00000420515 MED10Q9BTT4 135 aa28.82■■■□□ 2.2
FAAP20-207ENST00000420515 BEST1O76090 585 aa28.81■■■□□ 2.2
FAAP20-207ENST00000420515 PAEPP09466 180 aa28.81■■■□□ 2.2
FAAP20-207ENST00000420515 TWF1Q12792 350 aa28.81■■■□□ 2.2
FAAP20-207ENST00000420515 CLUL1Q15846 466 aa28.81■■■□□ 2.2
FAAP20-207ENST00000420515 UVSSAQ2YD98 709 aa28.81■■■□□ 2.2
FAAP20-207ENST00000420515 GPR152Q8TDT2 470 aa28.81■■■□□ 2.2
FAAP20-207ENST00000420515 FUBP3Q96I24 572 aaKnown RBP eCLIP28.81■■■□□ 2.2
FAAP20-207ENST00000420515 ZNF638Q14966 1978 aaKnown RBP28.81■■■□□ 2.2
FAAP20-207ENST00000420515 FSD2A1L4K1 749 aa28.8■■■□□ 2.2
FAAP20-207ENST00000420515 H3BQ06 376 aaPredicted RBP28.8■■■□□ 2.2
FAAP20-207ENST00000420515 CCL16O15467 120 aa28.8■■■□□ 2.2
FAAP20-207ENST00000420515 RARS2Q5T160 578 aaKnown RBP28.8■■■□□ 2.2
FAAP20-207ENST00000420515 TMC5Q6UXY8 1006 aa28.8■■■□□ 2.2
FAAP20-207ENST00000420515 SLC47A2Q86VL8 602 aa28.8■■■□□ 2.2
FAAP20-207ENST00000420515 HDAC7Q8WUI4 952 aa28.8■■■□□ 2.2
FAAP20-207ENST00000420515 ZNF707Q96C28 371 aaPredicted RBP28.8■■■□□ 2.2
FAAP20-207ENST00000420515 MSLNLQ96KJ4 702 aa28.8■■■□□ 2.2
FAAP20-207ENST00000420515 HNRNPABQ99729 332 aaKnown RBP28.8■■■□□ 2.2
FAAP20-207ENST00000420515 UBE2ZQ9H832 354 aaPredicted RBP28.8■■■□□ 2.2
FAAP20-207ENST00000420515 ABCB6Q9NP58 842 aa28.8■■■□□ 2.2
FAAP20-207ENST00000420515 KRT82Q9NSB4 513 aa28.8■■■□□ 2.2
FAAP20-207ENST00000420515 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP28.79■■■□□ 2.2
FAAP20-207ENST00000420515 CFHP08603 1231 aa28.79■■■□□ 2.2
FAAP20-207ENST00000420515 DDR2Q16832 855 aa28.79■■■□□ 2.2
FAAP20-207ENST00000420515 PPM1LQ5SGD2 360 aa28.79■■■□□ 2.2
FAAP20-207ENST00000420515 CCDC149Q6ZUS6 474 aa28.79■■■□□ 2.2
FAAP20-207ENST00000420515 VSTM4Q8IW00 320 aa28.79■■■□□ 2.2
FAAP20-207ENST00000420515 SPAG5Q96R06 1193 aa28.79■■■□□ 2.2
FAAP20-207ENST00000420515 KCNK16Q96T55 309 aa28.79■■■□□ 2.2
FAAP20-207ENST00000420515 DZANK1Q9NVP4 752 aa28.79■■■□□ 2.2
FAAP20-207ENST00000420515 CCDC195A0A1B0GUA6 201 aa28.79■■■□□ 2.2
FAAP20-207ENST00000420515 SPDYE4A6NLX3 237 aa28.79■■■□□ 2.2
FAAP20-207ENST00000420515 NCK2O43639 380 aa28.79■■■□□ 2.2
FAAP20-207ENST00000420515 GFPT2O94808 682 aa28.79■■■□□ 2.2
FAAP20-207ENST00000420515 TPM3P06753 285 aa28.79■■■□□ 2.2
FAAP20-207ENST00000420515 VDRP11473 427 aa28.79■■■□□ 2.2
FAAP20-207ENST00000420515 ZNF75DP51815 510 aa28.79■■■□□ 2.2
FAAP20-207ENST00000420515 SGO2Q562F6 1265 aa28.79■■■□□ 2.2
FAAP20-207ENST00000420515 ARHGAP17Q68EM7 881 aa28.79■■■□□ 2.2
FAAP20-207ENST00000420515 CACNA2D4Q7Z3S7 1137 aa28.79■■■□□ 2.2
FAAP20-207ENST00000420515 SCN4BQ8IWT1 228 aa28.79■■■□□ 2.2
FAAP20-207ENST00000420515 ZMIZ2Q8NF64 920 aa28.79■■■□□ 2.2
FAAP20-207ENST00000420515 SMOQ99835 787 aa28.79■■■□□ 2.2
FAAP20-207ENST00000420515 SFXN1Q9H9B4 322 aa28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms