RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 SLC46A2Q9BY10 475 aa22.85■■□□□ 1.25
PTPN4-202ENST00000420482 SLC39A2Q9NP94 309 aa22.85■■□□□ 1.25
PTPN4-202ENST00000420482 USP25Q9UHP3 1055 aa22.85■■□□□ 1.25
PTPN4-202ENST00000420482 COL4A2P08572 1712 aa22.85■■□□□ 1.25
PTPN4-202ENST00000420482 FRYLO94915 3013 aa22.84■■□□□ 1.25
PTPN4-202ENST00000420482 NCANO14594 1321 aa22.84■■□□□ 1.25
PTPN4-202ENST00000420482 SLC38A8A6NNN8 435 aa22.84■■□□□ 1.25
PTPN4-202ENST00000420482 F11P03951 625 aa22.84■■□□□ 1.25
PTPN4-202ENST00000420482 HMGA1P17096 107 aaKnown RBP22.84■■□□□ 1.25
PTPN4-202ENST00000420482 CYP2F1P24903 491 aa22.84■■□□□ 1.25
PTPN4-202ENST00000420482 FZD5Q13467 585 aa22.84■■□□□ 1.25
PTPN4-202ENST00000420482 TRPC3Q13507 836 aa22.84■■□□□ 1.25
PTPN4-202ENST00000420482 DGKKQ5KSL6 1271 aa22.84■■□□□ 1.25
PTPN4-202ENST00000420482 CC2D1AQ6P1N0 951 aaPredicted RBP22.84■■□□□ 1.25
PTPN4-202ENST00000420482 SCN4BQ8IWT1 228 aa22.84■■□□□ 1.25
PTPN4-202ENST00000420482 C12orf56Q8IXR9 622 aa22.84■■□□□ 1.25
PTPN4-202ENST00000420482 RUBCNQ92622 972 aa22.84■■□□□ 1.25
PTPN4-202ENST00000420482 CCDC127Q96BQ5 260 aa22.84■■□□□ 1.25
PTPN4-202ENST00000420482 CEP295NLQ96MC4 621 aa22.84■■□□□ 1.25
PTPN4-202ENST00000420482 SYT15Q9BQS2 421 aa22.84■■□□□ 1.25
PTPN4-202ENST00000420482 PRMT8Q9NR22 394 aaPredicted RBP22.84■■□□□ 1.25
PTPN4-202ENST00000420482 EXOC1Q9NV70 894 aa22.84■■□□□ 1.25
PTPN4-202ENST00000420482 EHD2Q9NZN4 543 aa22.84■■□□□ 1.25
PTPN4-202ENST00000420482 MAGEC2Q9UBF1 373 aaPredicted RBP22.84■■□□□ 1.25
PTPN4-202ENST00000420482 PTPRJQ12913 1337 aa22.83■■□□□ 1.25
PTPN4-202ENST00000420482 MYBPHLA2RUH7 354 aa22.83■■□□□ 1.25
PTPN4-202ENST00000420482 SHISA7A6NL88 538 aa22.83■■□□□ 1.25
PTPN4-202ENST00000420482 SPECC1L-ADORA2AF8WAN1 911 aa22.83■■□□□ 1.25
PTPN4-202ENST00000420482 EXOC3O60645 756 aa22.83■■□□□ 1.25
PTPN4-202ENST00000420482 PRAMEF12O95522 483 aa22.83■■□□□ 1.25
PTPN4-202ENST00000420482 MYL1P05976 194 aa22.83■■□□□ 1.25
PTPN4-202ENST00000420482 FAM163BP0C2L3 166 aa22.83■■□□□ 1.25
PTPN4-202ENST00000420482 MAGEA11P43364 429 aa22.83■■□□□ 1.25
PTPN4-202ENST00000420482 TNNC1P63316 161 aa22.83■■□□□ 1.25
PTPN4-202ENST00000420482 KRT85P78386 507 aa22.83■■□□□ 1.25
PTPN4-202ENST00000420482 AMPD2Q01433 879 aa22.83■■□□□ 1.25
PTPN4-202ENST00000420482 CYP24A1Q07973 514 aa22.83■■□□□ 1.25
PTPN4-202ENST00000420482 PSMD2Q13200 908 aa22.83■■□□□ 1.25
PTPN4-202ENST00000420482 CUL4BQ13620 913 aa22.83■■□□□ 1.25
PTPN4-202ENST00000420482 DDR2Q16832 855 aa22.83■■□□□ 1.25
PTPN4-202ENST00000420482 ITPRIPL2Q3MIP1 535 aa22.83■■□□□ 1.25
PTPN4-202ENST00000420482 VSTM1Q6UX27 236 aa22.83■■□□□ 1.25
PTPN4-202ENST00000420482 OSTM1Q86WC4 334 aa22.83■■□□□ 1.25
PTPN4-202ENST00000420482 ZNF687Q8N1G0 1237 aa22.83■■□□□ 1.25
PTPN4-202ENST00000420482 SECISBP2LQ93073 1101 aaKnown RBP22.83■■□□□ 1.25
PTPN4-202ENST00000420482 FAM84AQ96KN4 292 aa22.83■■□□□ 1.25
PTPN4-202ENST00000420482 MYRFLQ96LU7 910 aa22.83■■□□□ 1.25
PTPN4-202ENST00000420482 SNX25Q9H3E2 840 aa22.83■■□□□ 1.25
PTPN4-202ENST00000420482 TDP1Q9NUW8 608 aa22.83■■□□□ 1.25
PTPN4-202ENST00000420482 ATP6V1DQ9Y5K8 247 aa22.83■■□□□ 1.25
PTPN4-202ENST00000420482 NOL4O94818 638 aa22.82■■□□□ 1.24
PTPN4-202ENST00000420482 WARSP23381 471 aaKnown RBP22.82■■□□□ 1.24
PTPN4-202ENST00000420482 ANXA13P27216 316 aa22.82■■□□□ 1.24
PTPN4-202ENST00000420482 CASP1P29466 404 aa22.82■■□□□ 1.24
PTPN4-202ENST00000420482 CTHP32929 405 aa22.82■■□□□ 1.24
PTPN4-202ENST00000420482 AP3M2P53677 418 aa22.82■■□□□ 1.24
PTPN4-202ENST00000420482 PKP1Q13835 747 aa22.82■■□□□ 1.24
PTPN4-202ENST00000420482 FAM171BQ6P995 826 aa22.82■■□□□ 1.24
PTPN4-202ENST00000420482 MON1AQ86VX9 555 aa22.82■■□□□ 1.24
PTPN4-202ENST00000420482 ZBTB44Q8NCP5 570 aa22.82■■□□□ 1.24
PTPN4-202ENST00000420482 CCDC47Q96A33 483 aaKnown RBP22.82■■□□□ 1.24
PTPN4-202ENST00000420482 EXOC4Q96A65 974 aa22.82■■□□□ 1.24
PTPN4-202ENST00000420482 ZFYVE19Q96K21 471 aa22.82■■□□□ 1.24
PTPN4-202ENST00000420482 PKMYT1Q99640 499 aa22.82■■□□□ 1.24
PTPN4-202ENST00000420482 GTSE1Q9NYZ3 720 aa22.82■■□□□ 1.24
PTPN4-202ENST00000420482 PHACTR2O75167 634 aa22.81■■□□□ 1.24
PTPN4-202ENST00000420482 CHRNB1P11230 501 aa22.81■■□□□ 1.24
PTPN4-202ENST00000420482 CMA1P23946 247 aa22.81■■□□□ 1.24
PTPN4-202ENST00000420482 GPR15P49685 360 aa22.81■■□□□ 1.24
PTPN4-202ENST00000420482 PDE6CP51160 858 aa22.81■■□□□ 1.24
PTPN4-202ENST00000420482 LIMS2Q7Z4I7 341 aa22.81■■□□□ 1.24
PTPN4-202ENST00000420482 SYAP1Q96A49 352 aaPredicted RBP22.81■■□□□ 1.24
PTPN4-202ENST00000420482 SPATA32Q96LK8 384 aa22.81■■□□□ 1.24
PTPN4-202ENST00000420482 SERTAD1Q9UHV2 236 aa22.81■■□□□ 1.24
PTPN4-202ENST00000420482 TACC1O75410 805 aa22.8■■□□□ 1.24
PTPN4-202ENST00000420482 CLSTN1O94985 981 aa22.8■■□□□ 1.24
PTPN4-202ENST00000420482 KIF20AO95235 890 aa22.8■■□□□ 1.24
PTPN4-202ENST00000420482 ATICP31939 592 aa22.8■■□□□ 1.24
PTPN4-202ENST00000420482 GNL1P36915 607 aaPredicted RBP22.8■■□□□ 1.24
PTPN4-202ENST00000420482 GRIK1P39086 918 aa22.8■■□□□ 1.24
PTPN4-202ENST00000420482 CXCL12P48061 93 aa22.8■■□□□ 1.24
PTPN4-202ENST00000420482 CYP27A1Q02318 531 aa22.8■■□□□ 1.24
PTPN4-202ENST00000420482 ZNF268Q14587 947 aaPredicted RBP22.8■■□□□ 1.24
PTPN4-202ENST00000420482 WDR72Q3MJ13 1102 aa22.8■■□□□ 1.24
PTPN4-202ENST00000420482 SDHAF4Q5VUM1 108 aa22.8■■□□□ 1.24
PTPN4-202ENST00000420482 TXNDC8Q6A555 127 aa22.8■■□□□ 1.24
PTPN4-202ENST00000420482 TMEM150AQ86TG1 271 aa22.8■■□□□ 1.24
PTPN4-202ENST00000420482 SYNPOQ8N3V7 929 aa22.8■■□□□ 1.24
PTPN4-202ENST00000420482 SPEM1Q8N4L4 309 aa22.8■■□□□ 1.24
PTPN4-202ENST00000420482 KBTBD7Q8WVZ9 684 aa22.8■■□□□ 1.24
PTPN4-202ENST00000420482 PAGE5Q96GU1 130 aa22.8■■□□□ 1.24
PTPN4-202ENST00000420482 LRRC3BQ96PB8 259 aa22.8■■□□□ 1.24
PTPN4-202ENST00000420482 SMG9Q9H0W8 520 aaKnown RBP22.8■■□□□ 1.24
PTPN4-202ENST00000420482 GKN1Q9NS71 199 aa22.8■■□□□ 1.24
PTPN4-202ENST00000420482 NCDNQ9UBB6 729 aa22.8■■□□□ 1.24
PTPN4-202ENST00000420482 GPR179Q6PRD1 2367 aa22.8■■□□□ 1.24
PTPN4-202ENST00000420482 TRAV19A0A0A6YYK7 116 aa22.79■■□□□ 1.24
PTPN4-202ENST00000420482 TRIM66O15016 1216 aa22.79■■□□□ 1.24
PTPN4-202ENST00000420482 STAU1O95793 577 aaKnown RBP22.79■■□□□ 1.24
PTPN4-202ENST00000420482 PDGFRBP09619 1106 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms