RNA–Protein interactions for RNA: ENST00000420239.6

CHD2-202, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-202ENST00000420239 FYB2Q5VWT5 728 aa6.41□□□□□ -1.38
CHD2-202ENST00000420239 SPTY2D1Q68D10 685 aaPredicted RBP6.41□□□□□ -1.38
CHD2-202ENST00000420239 CYP4F22Q6NT55 531 aa6.41□□□□□ -1.38
CHD2-202ENST00000420239 KLHL35Q6PF15 583 aa6.41□□□□□ -1.38
CHD2-202ENST00000420239 CCDC174Q6PII3 467 aa6.41□□□□□ -1.38
CHD2-202ENST00000420239 LVRNQ6Q4G3 990 aa6.41□□□□□ -1.38
CHD2-202ENST00000420239 UGT2A3Q6UWM9 527 aa6.41□□□□□ -1.38
CHD2-202ENST00000420239 C16orf86Q6ZW13 317 aa6.41□□□□□ -1.38
CHD2-202ENST00000420239 CYP2U1Q7Z449 544 aa6.41□□□□□ -1.38
CHD2-202ENST00000420239 NET1Q7Z628 596 aaPredicted RBP6.41□□□□□ -1.38
CHD2-202ENST00000420239 LRRC6Q86X45 466 aa6.41□□□□□ -1.38
CHD2-202ENST00000420239 SLC25A41Q8N5S1 370 aa6.41□□□□□ -1.38
CHD2-202ENST00000420239 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.41□□□□□ -1.38
CHD2-202ENST00000420239 PSPC1Q8WXF1 523 aaKnown RBP6.41□□□□□ -1.38
CHD2-202ENST00000420239 DGCR14Q96DF8 476 aaKnown RBP6.41□□□□□ -1.38
CHD2-202ENST00000420239 BTBD6Q96KE9 485 aa6.41□□□□□ -1.38
CHD2-202ENST00000420239 CORO1BQ9BR76 489 aa6.41□□□□□ -1.38
CHD2-202ENST00000420239 TMEM120AQ9BXJ8 343 aa6.41□□□□□ -1.38
CHD2-202ENST00000420239 C12orf65Q9H3J6 166 aaKnown RBP6.41□□□□□ -1.38
CHD2-202ENST00000420239 ZNF287Q9HBT7 754 aa6.41□□□□□ -1.38
CHD2-202ENST00000420239 SSU72Q9NP77 194 aaKnown RBP6.41□□□□□ -1.38
CHD2-202ENST00000420239 ACP6Q9NPH0 428 aa6.41□□□□□ -1.38
CHD2-202ENST00000420239 SEPT11Q9NVA2 429 aaKnown RBP6.41□□□□□ -1.38
CHD2-202ENST00000420239 DDX18Q9NVP1 670 aaKnown RBP6.41□□□□□ -1.38
CHD2-202ENST00000420239 SENP1Q9P0U3 644 aa6.41□□□□□ -1.38
CHD2-202ENST00000420239 ANKFY1Q9P2R3 1169 aa6.41□□□□□ -1.38
CHD2-202ENST00000420239 ANAPC5Q9UJX4 755 aa6.41□□□□□ -1.38
CHD2-202ENST00000420239 BARX2Q9UMQ3 279 aaPredicted RBP6.41□□□□□ -1.38
CHD2-202ENST00000420239 SMG5Q9UPR3 1016 aaKnown RBP6.41□□□□□ -1.38
CHD2-202ENST00000420239 TAF1LQ8IZX4 1826 aa6.41□□□□□ -1.38
CHD2-202ENST00000420239 DOT1LQ8TEK3 1739 aa6.4□□□□□ -1.38
CHD2-202ENST00000420239 UBE4BO95155 1302 aa6.4□□□□□ -1.38
CHD2-202ENST00000420239 WDR91A4D1P6 747 aa6.4□□□□□ -1.38
CHD2-202ENST00000420239 POTECB2RU33 542 aa6.4□□□□□ -1.38
CHD2-202ENST00000420239 FCHO1O14526 889 aa6.4□□□□□ -1.38
CHD2-202ENST00000420239 TGFB1I1O43294 461 aa6.4□□□□□ -1.38
CHD2-202ENST00000420239 MED24O75448 989 aa6.4□□□□□ -1.38
CHD2-202ENST00000420239 GAS8O95995 478 aa6.4□□□□□ -1.38
CHD2-202ENST00000420239 GNRH1P01148 92 aa6.4□□□□□ -1.38
CHD2-202ENST00000420239 CYP1A2P05177 515 aa6.4□□□□□ -1.38
CHD2-202ENST00000420239 TFAP2AP05549 437 aa6.4□□□□□ -1.38
CHD2-202ENST00000420239 ESRRAP11474 423 aaPredicted RBP6.4□□□□□ -1.38
CHD2-202ENST00000420239 GYS1P13807 737 aa6.4□□□□□ -1.38
CHD2-202ENST00000420239 UQCRBP14927 111 aa6.4□□□□□ -1.38
CHD2-202ENST00000420239 ALOX15P16050 662 aaPredicted RBP6.4□□□□□ -1.38
CHD2-202ENST00000420239 CA4P22748 312 aa6.4□□□□□ -1.38
CHD2-202ENST00000420239 ADRA1DP25100 572 aa6.4□□□□□ -1.38
CHD2-202ENST00000420239 PCSK6P29122 969 aa6.4□□□□□ -1.38
CHD2-202ENST00000420239 PSMC2P35998 433 aaKnown RBP6.4□□□□□ -1.38
CHD2-202ENST00000420239 MLH1P40692 756 aa6.4□□□□□ -1.38
CHD2-202ENST00000420239 AQP4P55087 323 aa6.4□□□□□ -1.38
CHD2-202ENST00000420239 ACTR3P61158 418 aa6.4□□□□□ -1.38
CHD2-202ENST00000420239 PLCB3Q01970 1234 aa6.4□□□□□ -1.38
CHD2-202ENST00000420239 ASPRV1Q53RT3 343 aa6.4□□□□□ -1.38
CHD2-202ENST00000420239 PPP1R26Q5T8A7 1209 aaPredicted RBP6.4□□□□□ -1.38
CHD2-202ENST00000420239 SH3PXD2AQ5TCZ1 1133 aa6.4□□□□□ -1.38
CHD2-202ENST00000420239 ALKBH2Q6NS38 261 aa6.4□□□□□ -1.38
CHD2-202ENST00000420239 SFR1Q86XK3 245 aa6.4□□□□□ -1.38
CHD2-202ENST00000420239 TREML1Q86YW5 311 aa6.4□□□□□ -1.38
CHD2-202ENST00000420239 BBOF1Q8ND07 529 aa6.4□□□□□ -1.38
CHD2-202ENST00000420239 RIN3Q8TB24 985 aa6.4□□□□□ -1.38
CHD2-202ENST00000420239 FAM172AQ8WUF8 416 aa6.4□□□□□ -1.38
CHD2-202ENST00000420239 HSPBAP1Q96EW2 488 aa6.4□□□□□ -1.38
CHD2-202ENST00000420239 SMC6Q96SB8 1091 aa6.4□□□□□ -1.38
CHD2-202ENST00000420239 CCDC77Q9BR77 488 aa6.4□□□□□ -1.38
CHD2-202ENST00000420239 SIKE1Q9BRV8 207 aa6.4□□□□□ -1.38
CHD2-202ENST00000420239 MAK16Q9BXY0 300 aaKnown RBP6.4□□□□□ -1.38
CHD2-202ENST00000420239 IKZF4Q9H2S9 585 aa6.4□□□□□ -1.38
CHD2-202ENST00000420239 BCAS3Q9H6U6 928 aa6.4□□□□□ -1.38
CHD2-202ENST00000420239 PPCSQ9HAB8 311 aa6.4□□□□□ -1.38
CHD2-202ENST00000420239 GPAMQ9HCL2 828 aa6.4□□□□□ -1.38
CHD2-202ENST00000420239 OLFML3Q9NRN5 406 aa6.4□□□□□ -1.38
CHD2-202ENST00000420239 DMAC2Q9NW81 257 aa6.4□□□□□ -1.38
CHD2-202ENST00000420239 ARMCX1Q9P291 453 aa6.4□□□□□ -1.38
CHD2-202ENST00000420239 APEX2Q9UBZ4 518 aa6.4□□□□□ -1.38
CHD2-202ENST00000420239 DNAJB4Q9UDY4 337 aa6.4□□□□□ -1.38
CHD2-202ENST00000420239 PAIP2BQ9ULR5 123 aaKnown RBP6.4□□□□□ -1.38
CHD2-202ENST00000420239 R3HDM2Q9Y2K5 976 aaKnown RBP6.4□□□□□ -1.38
CHD2-202ENST00000420239 FOCADQ5VW36 1801 aa6.4□□□□□ -1.39
CHD2-202ENST00000420239 RBBP6Q7Z6E9 1792 aaKnown RBP6.4□□□□□ -1.39
CHD2-202ENST00000420239 C15orf38-AP3S2A0A0A6YYH1 394 aa6.4□□□□□ -1.39
CHD2-202ENST00000420239 EXOC1LA0A1B0GW35 172 aa6.4□□□□□ -1.39
CHD2-202ENST00000420239 TRIM43BA6NCK2 446 aa6.4□□□□□ -1.39
CHD2-202ENST00000420239 AP1G1O43747 822 aa6.4□□□□□ -1.39
CHD2-202ENST00000420239 ALDH2P05091 517 aa6.4□□□□□ -1.39
CHD2-202ENST00000420239 GAP43P17677 238 aa6.4□□□□□ -1.39
CHD2-202ENST00000420239 PRDX5P30044 214 aa6.4□□□□□ -1.39
CHD2-202ENST00000420239 RFC4P35249 363 aa6.4□□□□□ -1.39
CHD2-202ENST00000420239 CHN2P52757 468 aa6.4□□□□□ -1.39
CHD2-202ENST00000420239 ARL4CP56559 192 aa6.4□□□□□ -1.39
CHD2-202ENST00000420239 GEMIN4P57678 1058 aaKnown RBP6.4□□□□□ -1.39
CHD2-202ENST00000420239 AP2B1P63010 937 aa6.4□□□□□ -1.39
CHD2-202ENST00000420239 SPIRE1Q08AE8 756 aa6.4□□□□□ -1.39
CHD2-202ENST00000420239 ASPHQ12797 758 aa6.4□□□□□ -1.39
CHD2-202ENST00000420239 DCTN2Q13561 401 aaKnown RBP6.4□□□□□ -1.39
CHD2-202ENST00000420239 CYLC2Q14093 348 aaPredicted RBP6.4□□□□□ -1.39
CHD2-202ENST00000420239 PDK3Q15120 406 aa6.4□□□□□ -1.39
CHD2-202ENST00000420239 MYLK3Q32MK0 819 aa6.4□□□□□ -1.39
CHD2-202ENST00000420239 TRMT5Q32P41 509 aaKnown RBP6.4□□□□□ -1.39
CHD2-202ENST00000420239 NADK2Q4G0N4 442 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms