RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 VSTM1Q6UX27 236 aa19.87■□□□□ 0.77
PTCD3-204ENST00000418628 PAQR9Q6ZVX9 377 aa19.87■□□□□ 0.77
PTCD3-204ENST00000418628 TTC39CQ8N584 583 aa19.87■□□□□ 0.77
PTCD3-204ENST00000418628 TNIP3Q96KP6 325 aa19.87■□□□□ 0.77
PTCD3-204ENST00000418628 SEPT5Q99719 369 aaPredicted RBP19.87■□□□□ 0.77
PTCD3-204ENST00000418628 NR2E1Q9Y466 385 aa19.87■□□□□ 0.77
PTCD3-204ENST00000418628 MOSPD3O75425 235 aa19.86■□□□□ 0.77
PTCD3-204ENST00000418628 MICAL2O94851 1124 aa19.86■□□□□ 0.77
PTCD3-204ENST00000418628 CLSTN1O94985 981 aa19.86■□□□□ 0.77
PTCD3-204ENST00000418628 LETM1O95202 739 aaPredicted RBP19.86■□□□□ 0.77
PTCD3-204ENST00000418628 CCR2P41597 374 aa19.86■□□□□ 0.77
PTCD3-204ENST00000418628 CDR1P51861 262 aa19.86■□□□□ 0.77
PTCD3-204ENST00000418628 EPHB3P54753 998 aa19.86■□□□□ 0.77
PTCD3-204ENST00000418628 GCNT1Q02742 428 aa19.86■□□□□ 0.77
PTCD3-204ENST00000418628 MGAT5BQ3V5L5 792 aa19.86■□□□□ 0.77
PTCD3-204ENST00000418628 ANO6Q4KMQ2 910 aa19.86■□□□□ 0.77
PTCD3-204ENST00000418628 POTEHQ6S545 545 aa19.86■□□□□ 0.77
PTCD3-204ENST00000418628 SPATA2LQ8IUW3 424 aaPredicted RBP19.86■□□□□ 0.77
PTCD3-204ENST00000418628 ZDHHC14Q8IZN3 488 aa19.86■□□□□ 0.77
PTCD3-204ENST00000418628 GJD3Q8N144 294 aa19.86■□□□□ 0.77
PTCD3-204ENST00000418628 LEMD2Q8NC56 503 aa19.86■□□□□ 0.77
PTCD3-204ENST00000418628 EHBP1Q8NDI1 1231 aa19.86■□□□□ 0.77
PTCD3-204ENST00000418628 CEP295NLQ96MC4 621 aa19.86■□□□□ 0.77
PTCD3-204ENST00000418628 NT5C1BQ96P26 610 aa19.86■□□□□ 0.77
PTCD3-204ENST00000418628 MYADMQ96S97 322 aa19.86■□□□□ 0.77
PTCD3-204ENST00000418628 TUBGCP2Q9BSJ2 902 aa19.86■□□□□ 0.77
PTCD3-204ENST00000418628 B3GNT5Q9BYG0 378 aa19.86■□□□□ 0.77
PTCD3-204ENST00000418628 ELOVL4Q9GZR5 314 aa19.86■□□□□ 0.77
PTCD3-204ENST00000418628 INTS2Q9H0H0 1204 aaKnown RBP19.86■□□□□ 0.77
PTCD3-204ENST00000418628 CISHQ9NSE2 258 aa19.86■□□□□ 0.77
PTCD3-204ENST00000418628 GCNT4Q9P109 453 aa19.86■□□□□ 0.77
PTCD3-204ENST00000418628 EPS15L1Q9UBC2 864 aa19.86■□□□□ 0.77
PTCD3-204ENST00000418628 TICRRQ7Z2Z1 1910 aa19.85■□□□□ 0.77
PTCD3-204ENST00000418628 SYCE3A1L190 88 aa19.85■□□□□ 0.77
PTCD3-204ENST00000418628 HMGA1P17096 107 aaKnown RBP19.85■□□□□ 0.77
PTCD3-204ENST00000418628 ACO1P21399 889 aaKnown RBP19.85■□□□□ 0.77
PTCD3-204ENST00000418628 TBXAS1P24557 533 aaPredicted RBP19.85■□□□□ 0.77
PTCD3-204ENST00000418628 MTIF2P46199 727 aaKnown RBP19.85■□□□□ 0.77
PTCD3-204ENST00000418628 ALDH1A3P47895 512 aa19.85■□□□□ 0.77
PTCD3-204ENST00000418628 GPR15P49685 360 aa19.85■□□□□ 0.77
PTCD3-204ENST00000418628 CETN1Q12798 172 aa19.85■□□□□ 0.77
PTCD3-204ENST00000418628 DPY19L2P1Q6NXN4 242 aa19.85■□□□□ 0.77
PTCD3-204ENST00000418628 TRIM65Q6PJ69 517 aa19.85■□□□□ 0.77
PTCD3-204ENST00000418628 OTOP3Q7RTS5 596 aa19.85■□□□□ 0.77
PTCD3-204ENST00000418628 ACOT1Q86TX2 421 aa19.85■□□□□ 0.77
PTCD3-204ENST00000418628 ARHGEF19Q8IW93 802 aa19.85■□□□□ 0.77
PTCD3-204ENST00000418628 HS6ST3Q8IZP7 471 aa19.85■□□□□ 0.77
PTCD3-204ENST00000418628 FUKQ8N0W3 1084 aa19.85■□□□□ 0.77
PTCD3-204ENST00000418628 ELMOD1Q8N336 334 aa19.85■□□□□ 0.77
PTCD3-204ENST00000418628 TDRD5Q8NAT2 981 aaKnown RBP19.85■□□□□ 0.77
PTCD3-204ENST00000418628 ITFG1Q8TB96 612 aa19.85■□□□□ 0.77
PTCD3-204ENST00000418628 RPGRIP1Q96KN7 1286 aa19.85■□□□□ 0.77
PTCD3-204ENST00000418628 NT5C1AQ9BXI3 368 aa19.85■□□□□ 0.77
PTCD3-204ENST00000418628 ZNF518BQ9C0D4 1074 aa19.85■□□□□ 0.77
PTCD3-204ENST00000418628 IL21Q9HBE4 155 aa19.85■□□□□ 0.77
PTCD3-204ENST00000418628 ZNF334Q9HCZ1 680 aaPredicted RBP19.85■□□□□ 0.77
PTCD3-204ENST00000418628 FANCLQ9NW38 375 aa19.85■□□□□ 0.77
PTCD3-204ENST00000418628 MAGEC2Q9UBF1 373 aaPredicted RBP19.85■□□□□ 0.77
PTCD3-204ENST00000418628 NOL4O94818 638 aa19.84■□□□□ 0.77
PTCD3-204ENST00000418628 CD58P19256 250 aa19.84■□□□□ 0.77
PTCD3-204ENST00000418628 FSHRP23945 695 aa19.84■□□□□ 0.77
PTCD3-204ENST00000418628 CACNA2D1P54289 1103 aa19.84■□□□□ 0.77
PTCD3-204ENST00000418628 RAD23BP54727 409 aa19.84■□□□□ 0.77
PTCD3-204ENST00000418628 ORC1Q13415 861 aa19.84■□□□□ 0.77
PTCD3-204ENST00000418628 NFKBIBQ15653 356 aa19.84■□□□□ 0.77
PTCD3-204ENST00000418628 HSP90AA4PQ58FG1 418 aa19.84■□□□□ 0.77
PTCD3-204ENST00000418628 APTXQ7Z2E3 356 aaKnown RBP19.84■□□□□ 0.77
PTCD3-204ENST00000418628 DNAJB7Q7Z6W7 309 aaPredicted RBP19.84■□□□□ 0.77
PTCD3-204ENST00000418628 ITIH5Q86UX2 942 aa19.84■□□□□ 0.77
PTCD3-204ENST00000418628 FAM35AQ86V20 835 aa19.84■□□□□ 0.77
PTCD3-204ENST00000418628 DHX40Q8IX18 779 aaKnown RBP19.84■□□□□ 0.77
PTCD3-204ENST00000418628 NPAS3Q8IXF0 933 aa19.84■□□□□ 0.77
PTCD3-204ENST00000418628 SLC4A11Q8NBS3 891 aa19.84■□□□□ 0.77
PTCD3-204ENST00000418628 SPATA17Q96L03 361 aa19.84■□□□□ 0.77
PTCD3-204ENST00000418628 ZNF512Q96ME7 567 aaPredicted RBP19.84■□□□□ 0.77
PTCD3-204ENST00000418628 KREMEN1Q96MU8 473 aa19.84■□□□□ 0.77
PTCD3-204ENST00000418628 CORO1BQ9BR76 489 aa19.84■□□□□ 0.77
PTCD3-204ENST00000418628 NDST4Q9H3R1 872 aa19.84■□□□□ 0.77
PTCD3-204ENST00000418628 ASAH2Q9NR71 780 aa19.84■□□□□ 0.77
PTCD3-204ENST00000418628 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.84■□□□□ 0.77
PTCD3-204ENST00000418628 PRKCSHP14314 528 aaPredicted RBP19.83■□□□□ 0.77
PTCD3-204ENST00000418628 BDNFP23560 247 aa19.83■□□□□ 0.77
PTCD3-204ENST00000418628 RPL10AP62906 217 aaKnown RBP19.83■□□□□ 0.77
PTCD3-204ENST00000418628 CYP27A1Q02318 531 aa19.83■□□□□ 0.77
PTCD3-204ENST00000418628 LRMPQ12912 555 aa19.83■□□□□ 0.77
PTCD3-204ENST00000418628 KRT31Q15323 416 aa19.83■□□□□ 0.77
PTCD3-204ENST00000418628 ZSCAN23Q3MJ62 389 aa19.83■□□□□ 0.77
PTCD3-204ENST00000418628 VWA3BQ502W6 1294 aa19.83■□□□□ 0.77
PTCD3-204ENST00000418628 SMYD5Q6GMV2 418 aa19.83■□□□□ 0.77
PTCD3-204ENST00000418628 IQCEQ6IPM2 695 aa19.83■□□□□ 0.77
PTCD3-204ENST00000418628 PHLDB3Q6NSJ2 640 aa19.83■□□□□ 0.77
PTCD3-204ENST00000418628 GAREM2Q75VX8 874 aa19.83■□□□□ 0.77
PTCD3-204ENST00000418628 GET4Q7L5D6 327 aaPredicted RBP19.83■□□□□ 0.77
PTCD3-204ENST00000418628 FGF13Q92913 245 aa19.83■□□□□ 0.77
PTCD3-204ENST00000418628 KAT5Q92993 513 aa19.83■□□□□ 0.77
PTCD3-204ENST00000418628 TCEAL4Q96EI5 215 aa19.83■□□□□ 0.77
PTCD3-204ENST00000418628 TRMT2BQ96GJ1 504 aaKnown RBP19.83■□□□□ 0.77
PTCD3-204ENST00000418628 C8orf48Q96LL4 319 aa19.83■□□□□ 0.77
PTCD3-204ENST00000418628 MYRFLQ96LU7 910 aa19.83■□□□□ 0.77
PTCD3-204ENST00000418628 SIX2Q9NPC8 291 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms