RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 MT-ND3P03897 115 aa17.71■□□□□ 0.43
SYNGAP1-202ENST00000418600 CCND3P30281 292 aaPredicted RBP17.71■□□□□ 0.43
SYNGAP1-202ENST00000418600 UBXN2BQ14CS0 331 aa17.71■□□□□ 0.43
SYNGAP1-202ENST00000418600 VSIG10LQ86VR7 867 aa17.71■□□□□ 0.43
SYNGAP1-202ENST00000418600 EIF4BP23588 611 aaKnown RBP17.71■□□□□ 0.43
SYNGAP1-202ENST00000418600 APBA1Q02410 837 aa17.71■□□□□ 0.43
SYNGAP1-202ENST00000418600 BST2Q10589 180 aaKnown RBP17.71■□□□□ 0.43
SYNGAP1-202ENST00000418600 FOXR1Q6PIV2 292 aa17.71■□□□□ 0.43
SYNGAP1-202ENST00000418600 PURBQ96QR8 312 aaKnown RBP17.71■□□□□ 0.43
SYNGAP1-202ENST00000418600 OSGEPL1Q9H4B0 414 aa17.71■□□□□ 0.43
SYNGAP1-202ENST00000418600 ZNF142P52746 1687 aaPredicted RBP17.71■□□□□ 0.43
SYNGAP1-202ENST00000418600 SMIM35A0A1B0GVV1 85 aa17.71■□□□□ 0.42
SYNGAP1-202ENST00000418600 PAX3P23760 479 aa17.71■□□□□ 0.42
SYNGAP1-202ENST00000418600 INPP1P49441 399 aa17.71■□□□□ 0.42
SYNGAP1-202ENST00000418600 ACLYP53396 1101 aa17.71■□□□□ 0.42
SYNGAP1-202ENST00000418600 BYSLQ13895 437 aaKnown RBP17.71■□□□□ 0.42
SYNGAP1-202ENST00000418600 PIGHQ14442 188 aaPredicted RBP17.71■□□□□ 0.42
SYNGAP1-202ENST00000418600 BRD3Q15059 726 aa17.71■□□□□ 0.42
SYNGAP1-202ENST00000418600 APODP05090 189 aa17.7■□□□□ 0.42
SYNGAP1-202ENST00000418600 CENPCQ03188 943 aa17.7■□□□□ 0.42
SYNGAP1-202ENST00000418600 DCLRE1AQ6PJP8 1040 aa17.7■□□□□ 0.42
SYNGAP1-202ENST00000418600 ZC3H18Q86VM9 953 aaKnown RBP17.7■□□□□ 0.42
SYNGAP1-202ENST00000418600 ZNF513Q8N8E2 541 aaPredicted RBP17.7■□□□□ 0.42
SYNGAP1-202ENST00000418600 MAGEB10Q96LZ2 347 aaPredicted RBP17.7■□□□□ 0.42
SYNGAP1-202ENST00000418600 CSH1P0DML2 217 aa17.7■□□□□ 0.42
SYNGAP1-202ENST00000418600 CSH2P0DML3 217 aa17.7■□□□□ 0.42
SYNGAP1-202ENST00000418600 PBLDP30039 288 aaPredicted RBP17.7■□□□□ 0.42
SYNGAP1-202ENST00000418600 THOP1P52888 689 aa17.7■□□□□ 0.42
SYNGAP1-202ENST00000418600 OLFML2BQ68BL8 750 aa17.7■□□□□ 0.42
SYNGAP1-202ENST00000418600 PRR23BQ6ZRT6 265 aa17.7■□□□□ 0.42
SYNGAP1-202ENST00000418600 CYP2C18P33260 490 aa17.7■□□□□ 0.42
SYNGAP1-202ENST00000418600 DPYDQ12882 1025 aa17.7■□□□□ 0.42
SYNGAP1-202ENST00000418600 ATL2Q8NHH9 583 aa17.7■□□□□ 0.42
SYNGAP1-202ENST00000418600 MORC4Q8TE76 937 aa17.7■□□□□ 0.42
SYNGAP1-202ENST00000418600 CYP3A43Q9HB55 503 aa17.7■□□□□ 0.42
SYNGAP1-202ENST00000418600 NRBP1Q9UHY1 535 aa17.7■□□□□ 0.42
SYNGAP1-202ENST00000418600 SIGLEC1Q9BZZ2 1709 aa17.7■□□□□ 0.42
SYNGAP1-202ENST00000418600 NT5C1B-RDH14C9J2C7 533 aa17.7■□□□□ 0.42
SYNGAP1-202ENST00000418600 EPHB2P29323 1055 aa17.7■□□□□ 0.42
SYNGAP1-202ENST00000418600 PDK1Q15118 436 aa17.7■□□□□ 0.42
SYNGAP1-202ENST00000418600 FLCNQ8NFG4 579 aa17.7■□□□□ 0.42
SYNGAP1-202ENST00000418600 LACTBL1A8MY62 500 aa17.69■□□□□ 0.42
SYNGAP1-202ENST00000418600 PFKMP08237 780 aa17.69■□□□□ 0.42
SYNGAP1-202ENST00000418600 SLC1A1P43005 524 aa17.69■□□□□ 0.42
SYNGAP1-202ENST00000418600 TAF11Q15544 211 aa17.69■□□□□ 0.42
SYNGAP1-202ENST00000418600 DR1Q01658 176 aa17.69■□□□□ 0.42
SYNGAP1-202ENST00000418600 PDAP1Q13442 181 aaKnown RBP17.69■□□□□ 0.42
SYNGAP1-202ENST00000418600 NPAS4Q8IUM7 802 aa17.69■□□□□ 0.42
SYNGAP1-202ENST00000418600 LENG1Q96BZ8 264 aaPredicted RBP17.69■□□□□ 0.42
SYNGAP1-202ENST00000418600 SHDQ96IW2 340 aa17.69■□□□□ 0.42
SYNGAP1-202ENST00000418600 ABCG4Q9H172 646 aa17.69■□□□□ 0.42
SYNGAP1-202ENST00000418600 TMEM63CQ9P1W3 806 aa17.69■□□□□ 0.42
SYNGAP1-202ENST00000418600 IQANK1A0A1B0GTG1 560 aa17.69■□□□□ 0.42
SYNGAP1-202ENST00000418600 USP17L7P0C7H9 530 aa17.69■□□□□ 0.42
SYNGAP1-202ENST00000418600 RETSATQ6NUM9 610 aa17.69■□□□□ 0.42
SYNGAP1-202ENST00000418600 SLC24A5Q71RS6 500 aa17.69■□□□□ 0.42
SYNGAP1-202ENST00000418600 ZNF677Q86XU0 584 aa17.69■□□□□ 0.42
SYNGAP1-202ENST00000418600 VGLL2Q8N8G2 317 aa17.69■□□□□ 0.42
SYNGAP1-202ENST00000418600 STK33Q9BYT3 514 aa17.69■□□□□ 0.42
SYNGAP1-202ENST00000418600 KCNN4O15554 427 aa17.69■□□□□ 0.42
SYNGAP1-202ENST00000418600 CCL14Q16627 93 aa17.69■□□□□ 0.42
SYNGAP1-202ENST00000418600 FASTKD1Q53R41 847 aaKnown RBP17.69■□□□□ 0.42
SYNGAP1-202ENST00000418600 HABP4Q5JVS0 413 aaKnown RBP17.69■□□□□ 0.42
SYNGAP1-202ENST00000418600 CNKSR3Q6P9H4 555 aa17.69■□□□□ 0.42
SYNGAP1-202ENST00000418600 SLC30A5Q8TAD4 765 aa17.69■□□□□ 0.42
SYNGAP1-202ENST00000418600 TMA16Q96EY4 203 aaKnown RBP17.69■□□□□ 0.42
SYNGAP1-202ENST00000418600 AGPAT3Q9NRZ7 376 aa17.69■□□□□ 0.42
SYNGAP1-202ENST00000418600 LOC102724159A0A0B4J2E5 919 aa17.69■□□□□ 0.42
SYNGAP1-202ENST00000418600 KPNA7A9QM74 516 aa17.69■□□□□ 0.42
SYNGAP1-202ENST00000418600 PWP2Q15269 919 aaKnown RBP17.69■□□□□ 0.42
SYNGAP1-202ENST00000418600 C6orf118Q5T5N4 469 aa17.69■□□□□ 0.42
SYNGAP1-202ENST00000418600 DLK2Q6UY11 383 aa17.69■□□□□ 0.42
SYNGAP1-202ENST00000418600 ACRBPQ8NEB7 543 aa17.69■□□□□ 0.42
SYNGAP1-202ENST00000418600 CCDC124Q96CT7 223 aaKnown RBP17.69■□□□□ 0.42
SYNGAP1-202ENST00000418600 TTPALQ9BTX7 342 aa17.69■□□□□ 0.42
SYNGAP1-202ENST00000418600 SPATA31C2B4DYI2 1134 aa17.68■□□□□ 0.42
SYNGAP1-202ENST00000418600 RENBPP51606 427 aa17.68■□□□□ 0.42
SYNGAP1-202ENST00000418600 EIF3EP60228 445 aaKnown RBP17.68■□□□□ 0.42
SYNGAP1-202ENST00000418600 RASGRP2Q7LDG7 609 aa17.68■□□□□ 0.42
SYNGAP1-202ENST00000418600 DACT3Q96B18 629 aaPredicted RBP17.68■□□□□ 0.42
SYNGAP1-202ENST00000418600 MKNK1Q9BUB5 465 aa17.68■□□□□ 0.42
SYNGAP1-202ENST00000418600 ASB7Q9H672 318 aa17.68■□□□□ 0.42
SYNGAP1-202ENST00000418600 OPLAHO14841 1288 aa17.68■□□□□ 0.42
SYNGAP1-202ENST00000418600 TATDN1Q6P1N9 297 aa17.68■□□□□ 0.42
SYNGAP1-202ENST00000418600 LBX2Q6XYB7 198 aa17.68■□□□□ 0.42
SYNGAP1-202ENST00000418600 FOSL2P15408 326 aa17.68■□□□□ 0.42
SYNGAP1-202ENST00000418600 PRKAA1Q13131 559 aa17.68■□□□□ 0.42
SYNGAP1-202ENST00000418600 EDRF1Q3B7T1 1238 aa17.68■□□□□ 0.42
SYNGAP1-202ENST00000418600 ZCCHC17Q9NP64 241 aaKnown RBP17.68■□□□□ 0.42
SYNGAP1-202ENST00000418600 TRMT13Q9NUP7 481 aaKnown RBP17.68■□□□□ 0.42
SYNGAP1-202ENST00000418600 PLTPP55058 493 aa17.68■□□□□ 0.42
SYNGAP1-202ENST00000418600 POU5F1BQ06416 359 aa17.68■□□□□ 0.42
SYNGAP1-202ENST00000418600 LATS2Q9NRM7 1088 aa17.68■□□□□ 0.42
SYNGAP1-202ENST00000418600 ORC6Q9Y5N6 252 aa17.68■□□□□ 0.42
SYNGAP1-202ENST00000418600 SMIM24O75264 130 aa17.67■□□□□ 0.42
SYNGAP1-202ENST00000418600 SMPD1P17405 629 aa17.67■□□□□ 0.42
SYNGAP1-202ENST00000418600 HDCP19113 662 aa17.67■□□□□ 0.42
SYNGAP1-202ENST00000418600 GFPT1Q06210 699 aaPredicted RBP17.67■□□□□ 0.42
SYNGAP1-202ENST00000418600 FGD4Q96M96 766 aa17.67■□□□□ 0.42
SYNGAP1-202ENST00000418600 AGAP3Q96P47 875 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms