RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 YIPF1Q9Y548 306 aa11.24□□□□□ -0.61
RFC1-203ENST00000418436 NCOR1O75376 2440 aa11.24□□□□□ -0.61
RFC1-203ENST00000418436 MYBPHLA2RUH7 354 aa11.23□□□□□ -0.61
RFC1-203ENST00000418436 C2CD4DB7Z1M9 353 aa11.23□□□□□ -0.61
RFC1-203ENST00000418436 TNFRSF10AO00220 468 aa11.23□□□□□ -0.61
RFC1-203ENST00000418436 DLL1O00548 723 aa11.23□□□□□ -0.61
RFC1-203ENST00000418436 N4BP1O75113 896 aaKnown RBP11.23□□□□□ -0.61
RFC1-203ENST00000418436 ATP2C2O75185 946 aa11.23□□□□□ -0.61
RFC1-203ENST00000418436 LRRN2O75325 713 aa11.23□□□□□ -0.61
RFC1-203ENST00000418436 FGFR1OPO95684 399 aaKnown RBP11.23□□□□□ -0.61
RFC1-203ENST00000418436 HAPLN1P10915 354 aaPredicted RBP11.23□□□□□ -0.61
RFC1-203ENST00000418436 P4HA1P13674 534 aa11.23□□□□□ -0.61
RFC1-203ENST00000418436 PTPN2P17706 415 aa11.23□□□□□ -0.61
RFC1-203ENST00000418436 ERCC5P28715 1186 aaPredicted RBP11.23□□□□□ -0.61
RFC1-203ENST00000418436 ASPAP45381 313 aa11.23□□□□□ -0.61
RFC1-203ENST00000418436 TUFMP49411 452 aaKnown RBP11.23□□□□□ -0.61
RFC1-203ENST00000418436 EPHA5P54756 1037 aa11.23□□□□□ -0.61
RFC1-203ENST00000418436 CDH8P55286 799 aa11.23□□□□□ -0.61
RFC1-203ENST00000418436 TWF1Q12792 350 aa11.23□□□□□ -0.61
RFC1-203ENST00000418436 PLD1Q13393 1074 aa11.23□□□□□ -0.61
RFC1-203ENST00000418436 CCDC40Q4G0X9 1142 aa11.23□□□□□ -0.61
RFC1-203ENST00000418436 DCAF17Q5H9S7 520 aaPredicted RBP11.23□□□□□ -0.61
RFC1-203ENST00000418436 CCDC183Q5T5S1 534 aa11.23□□□□□ -0.61
RFC1-203ENST00000418436 TCERG1LQ5VWI1 586 aa11.23□□□□□ -0.61
RFC1-203ENST00000418436 SPOPLQ6IQ16 392 aa11.23□□□□□ -0.61
RFC1-203ENST00000418436 OTOP3Q7RTS5 596 aa11.23□□□□□ -0.61
RFC1-203ENST00000418436 IRF2BP1Q8IU81 584 aa11.23□□□□□ -0.61
RFC1-203ENST00000418436 ZDHHC14Q8IZN3 488 aa11.23□□□□□ -0.61
RFC1-203ENST00000418436 TTC9BQ8N6N2 239 aa11.23□□□□□ -0.61
RFC1-203ENST00000418436 SYT15Q9BQS2 421 aa11.23□□□□□ -0.61
RFC1-203ENST00000418436 PI4K2AQ9BTU6 479 aa11.23□□□□□ -0.61
RFC1-203ENST00000418436 BCO2Q9BYV7 579 aa11.23□□□□□ -0.61
RFC1-203ENST00000418436 DNAJC25Q9H1X3 360 aa11.23□□□□□ -0.61
RFC1-203ENST00000418436 SNX25Q9H3E2 840 aa11.23□□□□□ -0.61
RFC1-203ENST00000418436 SMYD3Q9H7B4 428 aa11.23□□□□□ -0.61
RFC1-203ENST00000418436 MMRN2Q9H8L6 949 aa11.23□□□□□ -0.61
RFC1-203ENST00000418436 APOBEC3GQ9HC16 384 aaKnown RBP11.23□□□□□ -0.61
RFC1-203ENST00000418436 ABCB6Q9NP58 842 aa11.23□□□□□ -0.61
RFC1-203ENST00000418436 CRTAC1Q9NQ79 661 aa11.23□□□□□ -0.61
RFC1-203ENST00000418436 HCFC1R1Q9NWW0 138 aa11.23□□□□□ -0.61
RFC1-203ENST00000418436 RAB20Q9NX57 234 aa11.23□□□□□ -0.61
RFC1-203ENST00000418436 CEP72Q9P209 647 aa11.23□□□□□ -0.61
RFC1-203ENST00000418436 DACH1Q9UI36 760 aa11.23□□□□□ -0.61
RFC1-203ENST00000418436 GTF3C4Q9UKN8 822 aa11.23□□□□□ -0.61
RFC1-203ENST00000418436 PCDHB5Q9Y5E4 795 aa11.23□□□□□ -0.61
RFC1-203ENST00000418436 MUC3AQ02505 3323 aa11.23□□□□□ -0.61
RFC1-203ENST00000418436 GREB1Q4ZG55 1949 aa11.23□□□□□ -0.61
RFC1-203ENST00000418436 BDP1A6H8Y1 2624 aa11.22□□□□□ -0.61
RFC1-203ENST00000418436 RHOP08100 348 aa11.22□□□□□ -0.61
RFC1-203ENST00000418436 PDGFRBP09619 1106 aa11.22□□□□□ -0.61
RFC1-203ENST00000418436 FSHRP23945 695 aa11.22□□□□□ -0.61
RFC1-203ENST00000418436 SSTR3P32745 418 aaPredicted RBP11.22□□□□□ -0.61
RFC1-203ENST00000418436 CLCN1P35523 988 aa11.22□□□□□ -0.61
RFC1-203ENST00000418436 RAP1GAPP47736 663 aa11.22□□□□□ -0.61
RFC1-203ENST00000418436 ALDH1A3P47895 512 aa11.22□□□□□ -0.61
RFC1-203ENST00000418436 FMO5P49326 533 aa11.22□□□□□ -0.61
RFC1-203ENST00000418436 NOP14P78316 857 aaKnown RBP11.22□□□□□ -0.61
RFC1-203ENST00000418436 NTHL1P78549 312 aa11.22□□□□□ -0.61
RFC1-203ENST00000418436 CCDC142Q17RM4 750 aa11.22□□□□□ -0.61
RFC1-203ENST00000418436 CFAP221Q4G0U5 840 aa11.22□□□□□ -0.61
RFC1-203ENST00000418436 DENND4CQ5VZ89 1909 aa11.22□□□□□ -0.61
RFC1-203ENST00000418436 RNF135Q8IUD6 432 aa11.22□□□□□ -0.61
RFC1-203ENST00000418436 OR6B3Q8NGW1 331 aa11.22□□□□□ -0.61
RFC1-203ENST00000418436 MYCBPAPQ8TBZ2 947 aa11.22□□□□□ -0.61
RFC1-203ENST00000418436 TTC28Q96AY4 2481 aa11.22□□□□□ -0.61
RFC1-203ENST00000418436 ACSF2Q96CM8 615 aaPredicted RBP11.22□□□□□ -0.61
RFC1-203ENST00000418436 FUBP3Q96I24 572 aaKnown RBP eCLIP11.22□□□□□ -0.61
RFC1-203ENST00000418436 ZNF512Q96ME7 567 aaPredicted RBP11.22□□□□□ -0.61
RFC1-203ENST00000418436 MYADMQ96S97 322 aa11.22□□□□□ -0.61
RFC1-203ENST00000418436 SPSB2Q99619 263 aa11.22□□□□□ -0.61
RFC1-203ENST00000418436 LRRC3Q9BY71 257 aa11.22□□□□□ -0.61
RFC1-203ENST00000418436 IMPG2Q9BZV3 1241 aa11.22□□□□□ -0.61
RFC1-203ENST00000418436 SLC6A16Q9GZN6 736 aa11.22□□□□□ -0.61
RFC1-203ENST00000418436 CYP3A43Q9HB55 503 aa11.22□□□□□ -0.61
RFC1-203ENST00000418436 MYO10Q9HD67 2058 aa11.22□□□□□ -0.61
RFC1-203ENST00000418436 ABI2Q9NYB9 513 aaPredicted RBP11.22□□□□□ -0.61
RFC1-203ENST00000418436 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.22□□□□□ -0.61
RFC1-203ENST00000418436 TMEM63CQ9P1W3 806 aa11.22□□□□□ -0.61
RFC1-203ENST00000418436 EPS15L1Q9UBC2 864 aa11.22□□□□□ -0.61
RFC1-203ENST00000418436 ASB3Q9Y575 518 aa11.22□□□□□ -0.61
RFC1-203ENST00000418436 A8MXQ7 604 aa11.21□□□□□ -0.61
RFC1-203ENST00000418436 P4HA2O15460 535 aa11.21□□□□□ -0.61
RFC1-203ENST00000418436 SOAT2O75908 522 aa11.21□□□□□ -0.61
RFC1-203ENST00000418436 MICAL2O94851 1124 aa11.21□□□□□ -0.61
RFC1-203ENST00000418436 CCDC192P0DO97 292 aa11.21□□□□□ -0.61
RFC1-203ENST00000418436 PTPN1P18031 435 aaKnown RBP11.21□□□□□ -0.61
RFC1-203ENST00000418436 ATF6P18850 670 aa11.21□□□□□ -0.61
RFC1-203ENST00000418436 MAGEA11P43364 429 aa11.21□□□□□ -0.61
RFC1-203ENST00000418436 EPHB3P54753 998 aa11.21□□□□□ -0.61
RFC1-203ENST00000418436 PSMC1P62191 440 aaKnown RBP11.21□□□□□ -0.61
RFC1-203ENST00000418436 INCA1Q0VD86 236 aa11.21□□□□□ -0.61
RFC1-203ENST00000418436 KCNH2Q12809 1159 aa11.21□□□□□ -0.61
RFC1-203ENST00000418436 MAPRE1Q15691 268 aaKnown RBP11.21□□□□□ -0.61
RFC1-203ENST00000418436 SLC5A9Q2M3M2 681 aa11.21□□□□□ -0.61
RFC1-203ENST00000418436 MGAT5BQ3V5L5 792 aa11.21□□□□□ -0.61
RFC1-203ENST00000418436 PABPC1LQ4VXU2 614 aaKnown RBP11.21□□□□□ -0.61
RFC1-203ENST00000418436 PRSS36Q5K4E3 855 aa11.21□□□□□ -0.61
RFC1-203ENST00000418436 IQCEQ6IPM2 695 aa11.21□□□□□ -0.61
RFC1-203ENST00000418436 SCARA5Q6ZMJ2 495 aa11.21□□□□□ -0.61
RFC1-203ENST00000418436 C4orf50Q6ZRC1 276 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms