RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 STARD13Q9Y3M8 1113 aa12.28□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 CSADQ9Y600 493 aa12.28□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 SIGLEC16A6NMB1 481 aa12.28□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 PRPF4O43172 522 aaKnown RBP eCLIP12.28□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 MSCO60682 206 aa12.28□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 ASMTLO95671 621 aa12.28□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 OASLQ15646 514 aaKnown RBP12.28□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 LY6KQ17RY6 165 aa12.28□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 DARS2Q6PI48 645 aaKnown RBP12.28□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 METTL5Q9NRN9 209 aaKnown RBP12.28□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 PCDHGC3Q9UN70 934 aa12.28□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 TTLL13PA6NNM8 815 aa12.27□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 ZWINTO95229 277 aa12.27□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 MT-ND3P03897 115 aa12.27□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 EDN1P05305 212 aa12.27□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 RBP3P10745 1247 aa12.27□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 SSTR1P30872 391 aa12.27□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 CLNS1AP54105 237 aaKnown RBP12.27□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 ZNF252P-AS1Q0IIN9 211 aa12.27□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 ZNF268Q14587 947 aaPredicted RBP12.27□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 TRIM50Q86XT4 487 aa12.27□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 ADPGKQ9BRR6 497 aa12.27□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 C10orf88Q9H8K7 445 aa12.27□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 ASNSD1Q9NWL6 643 aa12.27□□□□□ -0.44
CSPG4P3Y-201ENST00000418188 H7C0C1 242 aa12.27□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 M0QYV0 167 aa12.27□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 ZBTB7AO95365 584 aa12.27□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 INHBAP08476 426 aa12.27□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 RAP1GAPP47736 663 aa12.27□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 ATP5OP48047 213 aa12.27□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 YWHAGP61981 247 aaKnown RBP eCLIP12.27□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 ZBTB16Q05516 673 aa12.27□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 ORC1Q13415 861 aa12.27□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 PDK4Q16654 411 aa12.27□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 PTPN20Q4JDL3 420 aa12.27□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 FAM102AQ5T9C2 384 aaPredicted RBP12.27□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 ZNF449Q6P9G9 518 aa12.27□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 ECHDC2Q86YB7 292 aa12.27□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 NIPA2Q8N8Q9 360 aa12.27□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 FAM71DQ8N9W8 422 aa12.27□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 SPATA18Q8TC71 538 aa12.27□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 PRCCQ92733 491 aaPredicted RBP12.27□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 HEXIM2Q96MH2 286 aaKnown RBP12.27□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 SLCO1B3Q9NPD5 702 aa12.27□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 XPO7Q9UIA9 1087 aaKnown RBP12.27□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 POLIQ9UNA4 740 aa12.27□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 EFR3BQ9Y2G0 817 aa12.27□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 L3MBTL1Q9Y468 752 aa12.27□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 PPME1Q9Y570 386 aa12.27□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 BANF1O75531 89 aa12.27□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 PTPN7P35236 360 aa12.27□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 PSMC4P43686 418 aa12.27□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 ACVR2BQ13705 512 aa12.27□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 TARBP2Q15633 366 aaKnown RBP12.27□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 FAM228AQ86W67 206 aa12.27□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 FBXO36Q8NEA4 188 aa12.27□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 CPSF3Q9UKF6 684 aaKnown RBP12.27□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 ZNF646O15015 1829 aaPredicted RBP12.27□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 GOLGA8RI6L899 631 aa12.26□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 SMAPO00193 183 aa12.26□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 LRCH4O75427 683 aa12.26□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 UNC5CO95185 931 aa12.26□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 KRT16P08779 473 aa12.26□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 CCND1P24385 295 aa12.26□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 KDELR1P24390 212 aa12.26□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 ELF1P32519 619 aa12.26□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 CDH8P55286 799 aa12.26□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 IGBP1P78318 339 aa12.26□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 KRT81Q14533 505 aa12.26□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 GALNTL6Q49A17 601 aa12.26□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 WLSQ5T9L3 541 aa12.26□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 BBS12Q6ZW61 710 aa12.26□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 ZC3H18Q86VM9 953 aaKnown RBP12.26□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 MAP7D3Q8IWC1 876 aa12.26□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 JOSD2Q8TAC2 188 aa12.26□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 SLC35B2Q8TB61 432 aa12.26□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 SPOCK2Q92563 424 aa12.26□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 SPATA33Q96N06 139 aa12.26□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 CYTH2Q99418 400 aa12.26□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 PAFAH2Q99487 392 aa12.26□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 MYH9P35579 1960 aaKnown RBP12.26□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 IQANK1A0A1B0GTG1 560 aa12.26□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 NFKBIEO00221 500 aa12.26□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 ACKR2O00590 384 aa12.26□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 PEX10O60683 326 aa12.26□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 CXCL8P10145 99 aa12.26□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 SKIV2L2P42285 1042 aaKnown RBP12.26□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 NAA25Q14CX7 972 aa12.26□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 SCYL2Q6P3W7 929 aa12.26□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 CTAGE3PQ8IX95 158 aa12.26□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 ALKBH8Q96BT7 664 aaKnown RBP12.26□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 MIS12Q9H081 205 aa12.26□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 CXorf56Q9H5V9 222 aa12.26□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 IGKV6D-21A0A0A0MT36 114 aa12.26□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 A0A1W2PPM1 405 aa12.26□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 PRPSAP2O60256 369 aa12.26□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 IL18RAPO95256 599 aa12.26□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 CDH6P55285 790 aa12.26□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 ROR1Q01973 937 aa12.26□□□□□ -0.45
CSPG4P3Y-201ENST00000418188 RNASELQ05823 741 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms