RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 TRMT1Q9NXH9 659 aaKnown RBP7.28□□□□□ -1.24
CPS1-202ENST00000417946 ZMYND8Q9ULU4 1186 aaPredicted RBP7.28□□□□□ -1.24
CPS1-202ENST00000417946 PCDHGC3Q9UN70 934 aa7.28□□□□□ -1.24
CPS1-202ENST00000417946 STXBP5LQ9Y2K9 1186 aa7.28□□□□□ -1.24
CPS1-202ENST00000417946 PCDHB7Q9Y5E2 793 aa7.28□□□□□ -1.24
CPS1-202ENST00000417946 PCDHA13Q9Y5I0 950 aa7.28□□□□□ -1.24
CPS1-202ENST00000417946 BZW2Q9Y6E2 419 aaKnown RBP7.28□□□□□ -1.24
CPS1-202ENST00000417946 MRPL42Q9Y6G3 142 aaKnown RBP7.28□□□□□ -1.24
CPS1-202ENST00000417946 WASF2Q9Y6W5 498 aa7.28□□□□□ -1.24
CPS1-202ENST00000417946 DUSP10Q9Y6W6 482 aa7.28□□□□□ -1.24
CPS1-202ENST00000417946 TCRBV5S1A1TA0A578 114 aa7.27□□□□□ -1.25
CPS1-202ENST00000417946 J3QL48 77 aa7.27□□□□□ -1.25
CPS1-202ENST00000417946 CYB561D2O14569 222 aa7.27□□□□□ -1.25
CPS1-202ENST00000417946 NRP1O14786 923 aa7.27□□□□□ -1.25
CPS1-202ENST00000417946 ATP2C2O75185 946 aa7.27□□□□□ -1.25
CPS1-202ENST00000417946 B3GAT3O94766 335 aa7.27□□□□□ -1.25
CPS1-202ENST00000417946 ARHGEF15O94989 841 aa7.27□□□□□ -1.25
CPS1-202ENST00000417946 CCDC175P0C221 793 aa7.27□□□□□ -1.25
CPS1-202ENST00000417946 FAM163BP0C2L3 166 aa7.27□□□□□ -1.25
CPS1-202ENST00000417946 ACAT1P24752 427 aaKnown RBP7.27□□□□□ -1.25
CPS1-202ENST00000417946 GNA15P30679 374 aa7.27□□□□□ -1.25
CPS1-202ENST00000417946 CYLC1P35663 651 aaPredicted RBP7.27□□□□□ -1.25
CPS1-202ENST00000417946 PDE6CP51160 858 aa7.27□□□□□ -1.25
CPS1-202ENST00000417946 CENPCQ03188 943 aa7.27□□□□□ -1.25
CPS1-202ENST00000417946 PPIGQ13427 754 aaKnown RBP eCLIP7.27□□□□□ -1.25
CPS1-202ENST00000417946 ARHGAP17Q68EM7 881 aa7.27□□□□□ -1.25
CPS1-202ENST00000417946 LLGL2Q6P1M3 1020 aa7.27□□□□□ -1.25
CPS1-202ENST00000417946 ALKBH5Q6P6C2 394 aaKnown RBP7.27□□□□□ -1.25
CPS1-202ENST00000417946 DCLRE1AQ6PJP8 1040 aa7.27□□□□□ -1.25
CPS1-202ENST00000417946 PAQR9Q6ZVX9 377 aa7.27□□□□□ -1.25
CPS1-202ENST00000417946 OTOP2Q7RTS6 562 aa7.27□□□□□ -1.25
CPS1-202ENST00000417946 ACOT1Q86TX2 421 aa7.27□□□□□ -1.25
CPS1-202ENST00000417946 UNC93AQ86WB7 457 aa7.27□□□□□ -1.25
CPS1-202ENST00000417946 ZNF677Q86XU0 584 aa7.27□□□□□ -1.25
CPS1-202ENST00000417946 CMTR2Q8IYT2 770 aaKnown RBP7.27□□□□□ -1.25
CPS1-202ENST00000417946 ADGRF2Q8IZF7 708 aa7.27□□□□□ -1.25
CPS1-202ENST00000417946 CRYBG2Q8N1P7 616 aa7.27□□□□□ -1.25
CPS1-202ENST00000417946 C12orf29Q8N999 325 aa7.27□□□□□ -1.25
CPS1-202ENST00000417946 URGCPQ8TCY9 931 aa7.27□□□□□ -1.25
CPS1-202ENST00000417946 HERVK_113Q902F9 699 aa7.27□□□□□ -1.25
CPS1-202ENST00000417946 TMEM176AQ96HP8 235 aa7.27□□□□□ -1.25
CPS1-202ENST00000417946 MMS19Q96T76 1030 aa7.27□□□□□ -1.25
CPS1-202ENST00000417946 TMEM175Q9BSA9 504 aa7.27□□□□□ -1.25
CPS1-202ENST00000417946 MRPL9Q9BYD2 267 aaKnown RBP7.27□□□□□ -1.25
CPS1-202ENST00000417946 GPR62Q9BZJ7 368 aa7.27□□□□□ -1.25
CPS1-202ENST00000417946 ISCUQ9H1K1 167 aa7.27□□□□□ -1.25
CPS1-202ENST00000417946 KANSL3Q9P2N6 904 aa7.27□□□□□ -1.25
CPS1-202ENST00000417946 TJP2Q9UDY2 1190 aa7.27□□□□□ -1.25
CPS1-202ENST00000417946 PRKAG2Q9UGJ0 569 aa7.27□□□□□ -1.25
CPS1-202ENST00000417946 LRFN2Q9ULH4 789 aa7.27□□□□□ -1.25
CPS1-202ENST00000417946 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.27□□□□□ -1.25
CPS1-202ENST00000417946 PRG3Q9Y2Y8 225 aaPredicted RBP7.27□□□□□ -1.25
CPS1-202ENST00000417946 TIMM13Q9Y5L4 95 aaPredicted RBP7.27□□□□□ -1.25
CPS1-202ENST00000417946 GREB1Q4ZG55 1949 aa7.27□□□□□ -1.25
CPS1-202ENST00000417946 PLXNA3P51805 1871 aa7.26□□□□□ -1.25
CPS1-202ENST00000417946 TULP2O00295 520 aa7.26□□□□□ -1.25
CPS1-202ENST00000417946 THAP12O43422 761 aa7.26□□□□□ -1.25
CPS1-202ENST00000417946 TBC1D4O60343 1298 aa7.26□□□□□ -1.25
CPS1-202ENST00000417946 EFCAB14O75071 495 aa7.26□□□□□ -1.25
CPS1-202ENST00000417946 MICAL2O94851 1124 aa7.26□□□□□ -1.25
CPS1-202ENST00000417946 UPP2O95045 317 aa7.26□□□□□ -1.25
CPS1-202ENST00000417946 VNN2O95498 520 aa7.26□□□□□ -1.25
CPS1-202ENST00000417946 AMHP03971 560 aa7.26□□□□□ -1.25
CPS1-202ENST00000417946 TMEM253P0C7T8 217 aa7.26□□□□□ -1.25
CPS1-202ENST00000417946 VDRP11473 427 aa7.26□□□□□ -1.25
CPS1-202ENST00000417946 GZMAP12544 262 aa7.26□□□□□ -1.25
CPS1-202ENST00000417946 P4HA1P13674 534 aa7.26□□□□□ -1.25
CPS1-202ENST00000417946 TYMPP19971 482 aa7.26□□□□□ -1.25
CPS1-202ENST00000417946 TNFAIP3P21580 790 aa7.26□□□□□ -1.25
CPS1-202ENST00000417946 FGFR3P22607 806 aa7.26□□□□□ -1.25
CPS1-202ENST00000417946 MAGEA1P43355 309 aa7.26□□□□□ -1.25
CPS1-202ENST00000417946 CACNA2D1P54289 1103 aa7.26□□□□□ -1.25
CPS1-202ENST00000417946 GALCP54803 685 aa7.26□□□□□ -1.25
CPS1-202ENST00000417946 BCAR1P56945 870 aa7.26□□□□□ -1.25
CPS1-202ENST00000417946 BPIFB4P59827 614 aa7.26□□□□□ -1.25
CPS1-202ENST00000417946 PSMC1P62191 440 aaKnown RBP7.26□□□□□ -1.25
CPS1-202ENST00000417946 YWHAEP62258 255 aaKnown RBP7.26□□□□□ -1.25
CPS1-202ENST00000417946 MRPL58Q14197 206 aaKnown RBP7.26□□□□□ -1.25
CPS1-202ENST00000417946 TCEAL1Q15170 157 aa7.26□□□□□ -1.25
CPS1-202ENST00000417946 PTPN20Q4JDL3 420 aa7.26□□□□□ -1.25
CPS1-202ENST00000417946 C9orf50Q5SZB4 431 aa7.26□□□□□ -1.25
CPS1-202ENST00000417946 PPP1R26Q5T8A7 1209 aaPredicted RBP7.26□□□□□ -1.25
CPS1-202ENST00000417946 NAA35Q5VZE5 725 aa7.26□□□□□ -1.25
CPS1-202ENST00000417946 FAM117BQ6P1L5 589 aa7.26□□□□□ -1.25
CPS1-202ENST00000417946 LCLAT1Q6UWP7 414 aa7.26□□□□□ -1.25
CPS1-202ENST00000417946 RSPO2Q6UXX9 243 aaPredicted RBP7.26□□□□□ -1.25
CPS1-202ENST00000417946 MON1BQ7L1V2 547 aa7.26□□□□□ -1.25
CPS1-202ENST00000417946 DPH6Q7L8W6 267 aa7.26□□□□□ -1.25
CPS1-202ENST00000417946 TAS1R1Q7RTX1 841 aa7.26□□□□□ -1.25
CPS1-202ENST00000417946 SPRED2Q7Z698 418 aa7.26□□□□□ -1.25
CPS1-202ENST00000417946 LRRTM3Q86VH5 581 aa7.26□□□□□ -1.25
CPS1-202ENST00000417946 TTC30AQ86WT1 665 aa7.26□□□□□ -1.25
CPS1-202ENST00000417946 PHF13Q86YI8 300 aaPredicted RBP7.26□□□□□ -1.25
CPS1-202ENST00000417946 PASD1Q8IV76 773 aa7.26□□□□□ -1.25
CPS1-202ENST00000417946 FMNL3Q8IVF7 1028 aa7.26□□□□□ -1.25
CPS1-202ENST00000417946 FUKQ8N0W3 1084 aa7.26□□□□□ -1.25
CPS1-202ENST00000417946 SLC39A11Q8N1S5 342 aa7.26□□□□□ -1.25
CPS1-202ENST00000417946 TTC39CQ8N584 583 aa7.26□□□□□ -1.25
CPS1-202ENST00000417946 C1orf131Q8NDD1 294 aaKnown RBP7.26□□□□□ -1.25
CPS1-202ENST00000417946 APPL2Q8NEU8 664 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms