RNA–Protein interactions for RNA: ENST00000417658.5

PRPF18-203, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 1,062 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-203ENST00000417658 USP17L7P0C7H9 530 aa17.57■□□□□ 0.4
PRPF18-203ENST00000417658 NR1H3Q13133 447 aa17.57■□□□□ 0.4
PRPF18-203ENST00000417658 DHX8Q14562 1220 aaKnown RBP17.57■□□□□ 0.4
PRPF18-203ENST00000417658 POSTNQ15063 836 aa17.57■□□□□ 0.4
PRPF18-203ENST00000417658 ZNF77Q15935 545 aa17.57■□□□□ 0.4
PRPF18-203ENST00000417658 USP39Q53GS9 565 aaKnown RBP17.57■□□□□ 0.4
PRPF18-203ENST00000417658 NAIF1Q69YI7 327 aaPredicted RBP17.57■□□□□ 0.4
PRPF18-203ENST00000417658 CRELD2Q6UXH1 353 aaPredicted RBP17.57■□□□□ 0.4
PRPF18-203ENST00000417658 ZHX3Q9H4I2 956 aa17.57■□□□□ 0.4
PRPF18-203ENST00000417658 ABCA7Q8IZY2 2146 aa17.57■□□□□ 0.4
PRPF18-203ENST00000417658 TCHHQ07283 1943 aa17.57■□□□□ 0.4
PRPF18-203ENST00000417658 FRYQ5TBA9 3013 aa17.56■□□□□ 0.4
PRPF18-203ENST00000417658 TRAV19A0A0A6YYK7 116 aa17.56■□□□□ 0.4
PRPF18-203ENST00000417658 LNP1A1A4G5 178 aa17.56■□□□□ 0.4
PRPF18-203ENST00000417658 TBCAO75347 108 aaKnown RBP17.56■□□□□ 0.4
PRPF18-203ENST00000417658 TADA3O75528 432 aa17.56■□□□□ 0.4
PRPF18-203ENST00000417658 GPR15P49685 360 aa17.56■□□□□ 0.4
PRPF18-203ENST00000417658 MCM6Q14566 821 aa17.56■□□□□ 0.4
PRPF18-203ENST00000417658 DDR2Q16832 855 aa17.56■□□□□ 0.4
PRPF18-203ENST00000417658 EML3Q32P44 896 aa17.56■□□□□ 0.4
PRPF18-203ENST00000417658 ZC2HC1CQ53FD0 456 aaPredicted RBP17.56■□□□□ 0.4
PRPF18-203ENST00000417658 EFCAB13Q8IY85 973 aa17.56■□□□□ 0.4
PRPF18-203ENST00000417658 TMEM86AQ8N2M4 240 aa17.56■□□□□ 0.4
PRPF18-203ENST00000417658 PDCL2Q8N4E4 241 aa17.56■□□□□ 0.4
PRPF18-203ENST00000417658 KDF1Q8NAX2 398 aaPredicted RBP17.56■□□□□ 0.4
PRPF18-203ENST00000417658 LRRC15Q8TF66 581 aa17.56■□□□□ 0.4
PRPF18-203ENST00000417658 RAD54LQ92698 747 aa17.56■□□□□ 0.4
PRPF18-203ENST00000417658 CYP2S1Q96SQ9 504 aa17.56■□□□□ 0.4
PRPF18-203ENST00000417658 WASF3Q9UPY6 502 aa17.56■□□□□ 0.4
PRPF18-203ENST00000417658 OBSL1O75147 1896 aa17.56■□□□□ 0.4
PRPF18-203ENST00000417658 TISP43B9A030 160 aa17.55■□□□□ 0.4
PRPF18-203ENST00000417658 KHNYNO15037 678 aaKnown RBP17.55■□□□□ 0.4
PRPF18-203ENST00000417658 CEACAM1P13688 526 aa17.55■□□□□ 0.4
PRPF18-203ENST00000417658 TCF3P15923 654 aa17.55■□□□□ 0.4
PRPF18-203ENST00000417658 CSRP1P21291 193 aaKnown RBP17.55■□□□□ 0.4
PRPF18-203ENST00000417658 CYP2F1P24903 491 aa17.55■□□□□ 0.4
PRPF18-203ENST00000417658 GBP1P32455 592 aa17.55■□□□□ 0.4
PRPF18-203ENST00000417658 IFNAR2P48551 515 aa17.55■□□□□ 0.4
PRPF18-203ENST00000417658 DGKEP52429 567 aa17.55■□□□□ 0.4
PRPF18-203ENST00000417658 PSMD2Q13200 908 aa17.55■□□□□ 0.4
PRPF18-203ENST00000417658 SDHAF4Q5VUM1 108 aa17.55■□□□□ 0.4
PRPF18-203ENST00000417658 PMS2CLQ68D20 193 aa17.55■□□□□ 0.4
PRPF18-203ENST00000417658 UNQ6494/PRO21346Q6UXR6 183 aa17.55■□□□□ 0.4
PRPF18-203ENST00000417658 ZNF720Q7Z2F6 126 aa17.55■□□□□ 0.4
PRPF18-203ENST00000417658 FSIP1Q8NA03 581 aa17.55■□□□□ 0.4
PRPF18-203ENST00000417658 TSTD1Q8NFU3 115 aa17.55■□□□□ 0.4
PRPF18-203ENST00000417658 SPATA18Q8TC71 538 aa17.55■□□□□ 0.4
PRPF18-203ENST00000417658 POMGNT1Q8WZA1 660 aa17.55■□□□□ 0.4
PRPF18-203ENST00000417658 HVCN1Q96D96 273 aa17.55■□□□□ 0.4
PRPF18-203ENST00000417658 SLC22A12Q96S37 553 aa17.55■□□□□ 0.4
PRPF18-203ENST00000417658 PKMYT1Q99640 499 aa17.55■□□□□ 0.4
PRPF18-203ENST00000417658 KIF2CQ99661 725 aa17.55■□□□□ 0.4
PRPF18-203ENST00000417658 WNT6Q9Y6F9 365 aa17.55■□□□□ 0.4
PRPF18-203ENST00000417658 NUP205Q92621 2012 aa17.54■□□□□ 0.4
PRPF18-203ENST00000417658 GIPC1O14908 333 aa17.54■□□□□ 0.4
PRPF18-203ENST00000417658 HUS1O60921 280 aa17.54■□□□□ 0.4
PRPF18-203ENST00000417658 CKMP06732 381 aa17.54■□□□□ 0.4
PRPF18-203ENST00000417658 PLCG1P19174 1290 aa17.54■□□□□ 0.4
PRPF18-203ENST00000417658 ADSSP30520 456 aa17.54■□□□□ 0.4
PRPF18-203ENST00000417658 DDIT3P35638 169 aa17.54■□□□□ 0.4
PRPF18-203ENST00000417658 MYL7Q01449 175 aa17.54■□□□□ 0.4
PRPF18-203ENST00000417658 USP4Q13107 963 aa17.54■□□□□ 0.4
PRPF18-203ENST00000417658 CFAP221Q4G0U5 840 aa17.54■□□□□ 0.4
PRPF18-203ENST00000417658 INTS6LQ5JSJ4 861 aaKnown RBP17.54■□□□□ 0.4
PRPF18-203ENST00000417658 SH3PXD2AQ5TCZ1 1133 aa17.54■□□□□ 0.4
PRPF18-203ENST00000417658 RASSF3Q86WH2 238 aa17.54■□□□□ 0.4
PRPF18-203ENST00000417658 STKLD1Q8NE28 680 aa17.54■□□□□ 0.4
PRPF18-203ENST00000417658 USP33Q8TEY7 942 aa17.54■□□□□ 0.4
PRPF18-203ENST00000417658 CACTINQ8WUQ7 758 aaKnown RBP17.54■□□□□ 0.4
PRPF18-203ENST00000417658 FUBP3Q96I24 572 aaKnown RBP eCLIP17.54■□□□□ 0.4
PRPF18-203ENST00000417658 TRPC7Q9HCX4 862 aa17.54■□□□□ 0.4
PRPF18-203ENST00000417658 TMEM9BQ9NQ34 198 aa17.54■□□□□ 0.4
PRPF18-203ENST00000417658 GDAP2Q9NXN4 497 aa17.54■□□□□ 0.4
PRPF18-203ENST00000417658 DDX43Q9NXZ2 648 aaKnown RBP17.54■□□□□ 0.4
PRPF18-203ENST00000417658 GCNT4Q9P109 453 aa17.54■□□□□ 0.4
PRPF18-203ENST00000417658 L1RE1Q9UN81 338 aa17.54■□□□□ 0.4
PRPF18-203ENST00000417658 ATRXP46100 2492 aa17.54■□□□□ 0.4
PRPF18-203ENST00000417658 TMEM8BA6NDV4 472 aa17.53■□□□□ 0.4
PRPF18-203ENST00000417658 C1QTNF9BB2RNN3 333 aa17.53■□□□□ 0.4
PRPF18-203ENST00000417658 CDX4O14627 284 aaPredicted RBP17.53■□□□□ 0.4
PRPF18-203ENST00000417658 C1QTNF9P0C862 333 aa17.53■□□□□ 0.4
PRPF18-203ENST00000417658 PFKLP17858 780 aa17.53■□□□□ 0.4
PRPF18-203ENST00000417658 HDCP19113 662 aa17.53■□□□□ 0.4
PRPF18-203ENST00000417658 LONP1P36776 959 aaKnown RBP17.53■□□□□ 0.4
PRPF18-203ENST00000417658 PDE6CP51160 858 aa17.53■□□□□ 0.4
PRPF18-203ENST00000417658 ZNF252P-AS1Q0IIN9 211 aa17.53■□□□□ 0.4
PRPF18-203ENST00000417658 LRRC52Q8N7C0 313 aa17.53■□□□□ 0.4
PRPF18-203ENST00000417658 KIAA1958Q8N8K9 716 aa17.53■□□□□ 0.4
PRPF18-203ENST00000417658 ARL14EPQ8N8R7 260 aaPredicted RBP17.53■□□□□ 0.4
PRPF18-203ENST00000417658 KRI1Q8N9T8 703 aaKnown RBP17.53■□□□□ 0.4
PRPF18-203ENST00000417658 SH3RF2Q8TEC5 729 aa17.53■□□□□ 0.4
PRPF18-203ENST00000417658 LARP4BQ92615 738 aaKnown RBP17.53■□□□□ 0.4
PRPF18-203ENST00000417658 CNOT6LQ96LI5 555 aaKnown RBP17.53■□□□□ 0.4
PRPF18-203ENST00000417658 CEP295NLQ96MC4 621 aa17.53■□□□□ 0.4
PRPF18-203ENST00000417658 LINC00597Q9H2U6 94 aa17.53■□□□□ 0.4
PRPF18-203ENST00000417658 GTF3C4Q9UKN8 822 aa17.53■□□□□ 0.4
PRPF18-203ENST00000417658 ZMIZ1Q9ULJ6 1067 aa17.53■□□□□ 0.4
PRPF18-203ENST00000417658 ARHGAP26Q9UNA1 814 aa17.53■□□□□ 0.4
PRPF18-203ENST00000417658 AGAP1Q9UPQ3 857 aa17.53■□□□□ 0.4
PRPF18-203ENST00000417658 H3BQV1 296 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms