RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 ACO1P21399 889 aaKnown RBP8.98□□□□□ -0.97
TRIM48-201ENST00000417545 TNFAIP3P21580 790 aa8.98□□□□□ -0.97
TRIM48-201ENST00000417545 GRIK1P39086 918 aa8.98□□□□□ -0.97
TRIM48-201ENST00000417545 ALDH1A3P47895 512 aa8.98□□□□□ -0.97
TRIM48-201ENST00000417545 ADKP55263 362 aaKnown RBP8.98□□□□□ -0.97
TRIM48-201ENST00000417545 GSDMDP57764 484 aa8.98□□□□□ -0.97
TRIM48-201ENST00000417545 RPL10AP62906 217 aaKnown RBP8.98□□□□□ -0.97
TRIM48-201ENST00000417545 GPR17Q13304 367 aa8.98□□□□□ -0.97
TRIM48-201ENST00000417545 PLD1Q13393 1074 aa8.98□□□□□ -0.97
TRIM48-201ENST00000417545 MRPL58Q14197 206 aaKnown RBP8.98□□□□□ -0.97
TRIM48-201ENST00000417545 GRIN2CQ14957 1233 aa8.98□□□□□ -0.97
TRIM48-201ENST00000417545 VEPH1Q14D04 833 aa8.98□□□□□ -0.97
TRIM48-201ENST00000417545 TAF3Q5VWG9 929 aa8.98□□□□□ -0.97
TRIM48-201ENST00000417545 TPGS2Q68CL5 300 aa8.98□□□□□ -0.97
TRIM48-201ENST00000417545 SMYD5Q6GMV2 418 aa8.98□□□□□ -0.97
TRIM48-201ENST00000417545 SLC8B1Q6J4K2 584 aa8.98□□□□□ -0.97
TRIM48-201ENST00000417545 RNF19BQ6ZMZ0 732 aa8.98□□□□□ -0.97
TRIM48-201ENST00000417545 LIMS2Q7Z4I7 341 aa8.98□□□□□ -0.97
TRIM48-201ENST00000417545 FAM35AQ86V20 835 aa8.98□□□□□ -0.97
TRIM48-201ENST00000417545 ZNF677Q86XU0 584 aa8.98□□□□□ -0.97
TRIM48-201ENST00000417545 FAM71AQ8IYT1 594 aa8.98□□□□□ -0.97
TRIM48-201ENST00000417545 SLC4A11Q8NBS3 891 aa8.98□□□□□ -0.97
TRIM48-201ENST00000417545 OR8K1Q8NGG5 319 aa8.98□□□□□ -0.97
TRIM48-201ENST00000417545 SLC2A14Q8TDB8 520 aa8.98□□□□□ -0.97
TRIM48-201ENST00000417545 SMARCD1Q96GM5 515 aa8.98□□□□□ -0.97
TRIM48-201ENST00000417545 NOX5Q96PH1 765 aa8.98□□□□□ -0.97
TRIM48-201ENST00000417545 TWNKQ96RR1 684 aa8.98□□□□□ -0.97
TRIM48-201ENST00000417545 CDCA3Q99618 268 aaPredicted RBP8.98□□□□□ -0.97
TRIM48-201ENST00000417545 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.98□□□□□ -0.97
TRIM48-201ENST00000417545 RXFP1Q9HBX9 757 aa8.98□□□□□ -0.97
TRIM48-201ENST00000417545 KRT82Q9NSB4 513 aa8.98□□□□□ -0.97
TRIM48-201ENST00000417545 LMCD1Q9NZU5 365 aa8.98□□□□□ -0.97
TRIM48-201ENST00000417545 AFF4Q9UHB7 1163 aaKnown RBP8.98□□□□□ -0.97
TRIM48-201ENST00000417545 PCDHGC5Q9Y5F6 944 aa8.98□□□□□ -0.97
TRIM48-201ENST00000417545 IRAK3Q9Y616 596 aa8.98□□□□□ -0.97
TRIM48-201ENST00000417545 ATG2AQ2TAZ0 1938 aa8.98□□□□□ -0.97
TRIM48-201ENST00000417545 WDR27A2RRH5 827 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 MYBPHLA2RUH7 354 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 MTMR11A4FU01 709 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 CLDN5O00501 218 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 TRIM66O15016 1216 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 PER2O15055 1255 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 EFEMP2O95967 443 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 FOSL2P15408 326 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 BDNFP23560 247 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 SSTR3P32745 418 aaPredicted RBP8.97□□□□□ -0.97
TRIM48-201ENST00000417545 TUFMP49411 452 aaKnown RBP8.97□□□□□ -0.97
TRIM48-201ENST00000417545 FXR1P51114 621 aaKnown RBP eCLIP8.97□□□□□ -0.97
TRIM48-201ENST00000417545 BCAT1P54687 386 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 JAM2P57087 298 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 SNX16P57768 344 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 IFRD2Q12894 506 aaPredicted RBP8.97□□□□□ -0.97
TRIM48-201ENST00000417545 RAB33AQ14088 237 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 SKIV2LQ15477 1246 aaKnown RBP8.97□□□□□ -0.97
TRIM48-201ENST00000417545 PPM1LQ5SGD2 360 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 PPP1R26Q5T8A7 1209 aaPredicted RBP8.97□□□□□ -0.97
TRIM48-201ENST00000417545 GPR153Q6NV75 609 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 SLC47A2Q86VL8 602 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 CRYBG2Q8N1P7 616 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 DEFB123Q8N688 67 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 UBR7Q8N806 425 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 C12orf29Q8N999 325 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 KREMEN2Q8NCW0 462 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 ZNF461Q8TAF7 563 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 BAP1Q92560 729 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 CASP10Q92851 521 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 PCED1BQ96HM7 432 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 FUBP3Q96I24 572 aaKnown RBP eCLIP8.97□□□□□ -0.97
TRIM48-201ENST00000417545 RTP3Q9BQQ7 232 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 CLSTN3Q9BQT9 956 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 TTYH3Q9C0H2 523 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 TTYH1Q9H313 450 aaPredicted RBP8.97□□□□□ -0.97
TRIM48-201ENST00000417545 SYNCQ9H7C4 482 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 CRTAC1Q9NQ79 661 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 ABHD10Q9NUJ1 306 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 TSPAN16Q9UKR8 245 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 BZW2Q9Y6E2 419 aaKnown RBP8.97□□□□□ -0.97
TRIM48-201ENST00000417545 RNF225M0QZC1 329 aaPredicted RBP8.97□□□□□ -0.97
TRIM48-201ENST00000417545 ADAM12O43184 909 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 TGM5O43548 720 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 CLASP2O75122 1294 aaKnown RBP8.97□□□□□ -0.97
TRIM48-201ENST00000417545 IPO7O95373 1038 aaKnown RBP8.97□□□□□ -0.97
TRIM48-201ENST00000417545 CALCAP01258 141 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 SERPING1P05155 500 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 SPATA31D3P0C874 917 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 SETSIPP0DME0 302 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 ATF2P15336 505 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 CYP11B1P15538 503 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 CLCN1P35523 988 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 ZNF132P52740 706 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 GOLGA8FQ08AF8 430 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 GOLGA8DPQ0D2H9 430 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 BST2Q10589 180 aaKnown RBP8.97□□□□□ -0.97
TRIM48-201ENST00000417545 DUSP4Q13115 394 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 TCEAL5Q5H9L2 206 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 ARHGAP17Q68EM7 881 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 VSTM1Q6UX27 236 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 RSPO2Q6UXX9 243 aaPredicted RBP8.97□□□□□ -0.97
TRIM48-201ENST00000417545 TRIM72Q6ZMU5 477 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 SPATA31D4Q6ZUB0 917 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms