RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 TUFMP49411 452 aaKnown RBP13.89□□□□□ -0.19
LINC00339-202ENST00000416769 TAF6P49848 677 aa13.89□□□□□ -0.19
LINC00339-202ENST00000416769 GTF2BQ00403 316 aa13.89□□□□□ -0.19
LINC00339-202ENST00000416769 PLCB2Q00722 1185 aa13.89□□□□□ -0.19
LINC00339-202ENST00000416769 PLK5Q496M5 336 aa13.89□□□□□ -0.19
LINC00339-202ENST00000416769 C1orf228Q6PIY5 440 aa13.89□□□□□ -0.19
LINC00339-202ENST00000416769 CACNA2D4Q7Z3S7 1137 aa13.89□□□□□ -0.19
LINC00339-202ENST00000416769 SFR1Q86XK3 245 aa13.89□□□□□ -0.19
LINC00339-202ENST00000416769 SFTPA1Q8IWL2 248 aa13.89□□□□□ -0.19
LINC00339-202ENST00000416769 PDCL2Q8N4E4 241 aa13.89□□□□□ -0.19
LINC00339-202ENST00000416769 KRI1Q8N9T8 703 aaKnown RBP13.89□□□□□ -0.19
LINC00339-202ENST00000416769 C12orf50Q8NA57 414 aaPredicted RBP13.89□□□□□ -0.19
LINC00339-202ENST00000416769 RPLP0P6Q8NHW5 317 aa13.89□□□□□ -0.19
LINC00339-202ENST00000416769 RAD54LQ92698 747 aa13.89□□□□□ -0.19
LINC00339-202ENST00000416769 SAAL1Q96ER3 474 aa13.89□□□□□ -0.19
LINC00339-202ENST00000416769 GCNAQ96QF7 691 aa13.89□□□□□ -0.19
LINC00339-202ENST00000416769 TBC1D7Q9P0N9 293 aa13.89□□□□□ -0.19
LINC00339-202ENST00000416769 HSFX1Q9UBD0 423 aa13.89□□□□□ -0.19
LINC00339-202ENST00000416769 PCDHA7Q9UN72 937 aa13.89□□□□□ -0.19
LINC00339-202ENST00000416769 L1RE1Q9UN81 338 aa13.89□□□□□ -0.19
LINC00339-202ENST00000416769 SLC8A2Q9UPR5 921 aa13.89□□□□□ -0.19
LINC00339-202ENST00000416769 ZFYVE26Q68DK2 2539 aa13.89□□□□□ -0.19
LINC00339-202ENST00000416769 MYOFQ9NZM1 2061 aa13.88□□□□□ -0.19
LINC00339-202ENST00000416769 KPNA7A9QM74 516 aa13.88□□□□□ -0.19
LINC00339-202ENST00000416769 H0YCG3 227 aa13.88□□□□□ -0.19
LINC00339-202ENST00000416769 SCAMP3O14828 347 aaKnown RBP13.88□□□□□ -0.19
LINC00339-202ENST00000416769 PRPF40AO75400 957 aaKnown RBP13.88□□□□□ -0.19
LINC00339-202ENST00000416769 FGF19O95750 216 aa13.88□□□□□ -0.19
LINC00339-202ENST00000416769 KRT18P05783 430 aaKnown RBP13.88□□□□□ -0.19
LINC00339-202ENST00000416769 SPINK2P20155 84 aa13.88□□□□□ -0.19
LINC00339-202ENST00000416769 POLR2BP30876 1174 aaKnown RBP13.88□□□□□ -0.19
LINC00339-202ENST00000416769 GJA4P35212 333 aa13.88□□□□□ -0.19
LINC00339-202ENST00000416769 AVPR1AP37288 418 aa13.88□□□□□ -0.19
LINC00339-202ENST00000416769 GRSF1Q12849 480 aaKnown RBP eCLIP13.88□□□□□ -0.19
LINC00339-202ENST00000416769 BFSP1Q12934 665 aa13.88□□□□□ -0.19
LINC00339-202ENST00000416769 TAF12Q16514 161 aa13.88□□□□□ -0.19
LINC00339-202ENST00000416769 SYNPOQ8N3V7 929 aa13.88□□□□□ -0.19
LINC00339-202ENST00000416769 AK8Q96MA6 479 aa13.88□□□□□ -0.19
LINC00339-202ENST00000416769 PKMYT1Q99640 499 aa13.88□□□□□ -0.19
LINC00339-202ENST00000416769 DUSP15Q9H1R2 295 aaPredicted RBP13.88□□□□□ -0.19
LINC00339-202ENST00000416769 LINC00597Q9H2U6 94 aa13.88□□□□□ -0.19
LINC00339-202ENST00000416769 GDPD2Q9HCC8 539 aa13.88□□□□□ -0.19
LINC00339-202ENST00000416769 TRPC7Q9HCX4 862 aa13.88□□□□□ -0.19
LINC00339-202ENST00000416769 TDP1Q9NUW8 608 aa13.88□□□□□ -0.19
LINC00339-202ENST00000416769 THG1LQ9NWX6 298 aaKnown RBP13.88□□□□□ -0.19
LINC00339-202ENST00000416769 AGO2Q9UKV8 859 aaKnown RBP13.88□□□□□ -0.19
LINC00339-202ENST00000416769 C2CD2Q9Y426 696 aa13.88□□□□□ -0.19
LINC00339-202ENST00000416769 ASCC3Q8N3C0 2202 aaKnown RBP13.88□□□□□ -0.19
LINC00339-202ENST00000416769 PTPRDP23468 1912 aa13.88□□□□□ -0.19
LINC00339-202ENST00000416769 THADAQ6YHU6 1953 aa13.87□□□□□ -0.19
LINC00339-202ENST00000416769 GOLGA8IPA6NC78 632 aa13.87□□□□□ -0.19
LINC00339-202ENST00000416769 C2orf78A6NCI8 922 aa13.87□□□□□ -0.19
LINC00339-202ENST00000416769 GOLGA8JA6NMD2 632 aa13.87□□□□□ -0.19
LINC00339-202ENST00000416769 TBCAO75347 108 aaKnown RBP13.87□□□□□ -0.19
LINC00339-202ENST00000416769 KCNK5O95279 499 aa13.87□□□□□ -0.19
LINC00339-202ENST00000416769 BCKDHBP21953 392 aa13.87□□□□□ -0.19
LINC00339-202ENST00000416769 ME1P48163 572 aa13.87□□□□□ -0.19
LINC00339-202ENST00000416769 CASP5P51878 434 aa13.87□□□□□ -0.19
LINC00339-202ENST00000416769 LIMK1P53667 647 aa13.87□□□□□ -0.19
LINC00339-202ENST00000416769 ZXDBP98169 803 aa13.87□□□□□ -0.19
LINC00339-202ENST00000416769 MESP2Q0VG99 397 aa13.87□□□□□ -0.19
LINC00339-202ENST00000416769 ZNF77Q15935 545 aa13.87□□□□□ -0.19
LINC00339-202ENST00000416769 KYAT1Q16773 422 aa13.87□□□□□ -0.19
LINC00339-202ENST00000416769 LMBRD2Q68DH5 695 aaPredicted RBP13.87□□□□□ -0.19
LINC00339-202ENST00000416769 PSAPL1Q6NUJ1 521 aa13.87□□□□□ -0.19
LINC00339-202ENST00000416769 DYMQ7RTS9 669 aa13.87□□□□□ -0.19
LINC00339-202ENST00000416769 MON1AQ86VX9 555 aa13.87□□□□□ -0.19
LINC00339-202ENST00000416769 METTL23Q86XA0 190 aa13.87□□□□□ -0.19
LINC00339-202ENST00000416769 CD302Q8IX05 232 aa13.87□□□□□ -0.19
LINC00339-202ENST00000416769 THEM5Q8N1Q8 247 aa13.87□□□□□ -0.19
LINC00339-202ENST00000416769 C1orf127Q8N9H9 656 aa13.87□□□□□ -0.19
LINC00339-202ENST00000416769 CXorf38Q8TB03 319 aa13.87□□□□□ -0.19
LINC00339-202ENST00000416769 SPPL2BQ8TCT7 592 aa13.87□□□□□ -0.19
LINC00339-202ENST00000416769 EPSTI1Q96J88 318 aa13.87□□□□□ -0.19
LINC00339-202ENST00000416769 CLIC6Q96NY7 704 aa13.87□□□□□ -0.19
LINC00339-202ENST00000416769 P2RY13Q9BPV8 354 aa13.87□□□□□ -0.19
LINC00339-202ENST00000416769 TPSD1Q9BZJ3 242 aa13.87□□□□□ -0.19
LINC00339-202ENST00000416769 CCSER1Q9C0I3 900 aa13.87□□□□□ -0.19
LINC00339-202ENST00000416769 ASB7Q9H672 318 aa13.87□□□□□ -0.19
LINC00339-202ENST00000416769 ANGPTL2Q9UKU9 493 aa13.87□□□□□ -0.19
LINC00339-202ENST00000416769 DERAQ9Y315 318 aa13.87□□□□□ -0.19
LINC00339-202ENST00000416769 PCDHB5Q9Y5E4 795 aa13.87□□□□□ -0.19
LINC00339-202ENST00000416769 STYXL1Q9Y6J8 313 aa13.87□□□□□ -0.19
LINC00339-202ENST00000416769 C1QTNF9BB2RNN3 333 aa13.86□□□□□ -0.19
LINC00339-202ENST00000416769 PATE3B3GLJ2 98 aa13.86□□□□□ -0.19
LINC00339-202ENST00000416769 ATP2C2O75185 946 aa13.86□□□□□ -0.19
LINC00339-202ENST00000416769 PPP1R37O75864 691 aa13.86□□□□□ -0.19
LINC00339-202ENST00000416769 ITGB3P05106 788 aa13.86□□□□□ -0.19
LINC00339-202ENST00000416769 C1QTNF9P0C862 333 aa13.86□□□□□ -0.19
LINC00339-202ENST00000416769 HNRNPLP14866 589 aaKnown RBP eCLIP13.86□□□□□ -0.19
LINC00339-202ENST00000416769 UBA7P41226 1012 aa13.86□□□□□ -0.19
LINC00339-202ENST00000416769 SEC13P55735 322 aa13.86□□□□□ -0.19
LINC00339-202ENST00000416769 TFAMQ00059 246 aaKnown RBP13.86□□□□□ -0.19
LINC00339-202ENST00000416769 CREB5Q02930 508 aa13.86□□□□□ -0.19
LINC00339-202ENST00000416769 PSMD2Q13200 908 aa13.86□□□□□ -0.19
LINC00339-202ENST00000416769 MTF1Q14872 753 aa13.86□□□□□ -0.19
LINC00339-202ENST00000416769 GAB4Q2WGN9 574 aa13.86□□□□□ -0.19
LINC00339-202ENST00000416769 ARL14EPQ8N8R7 260 aaPredicted RBP13.86□□□□□ -0.19
LINC00339-202ENST00000416769 POMGNT1Q8WZA1 660 aa13.86□□□□□ -0.19
LINC00339-202ENST00000416769 CALML4Q96GE6 196 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms