RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 HOXA6P31267 233 aa15.49■□□□□ 0.07
PAF1-202ENST00000416728 AMPD2Q01433 879 aa15.49■□□□□ 0.07
PAF1-202ENST00000416728 MYO1EQ12965 1108 aa15.49■□□□□ 0.07
PAF1-202ENST00000416728 STK38Q15208 465 aa15.49■□□□□ 0.07
PAF1-202ENST00000416728 CFAP221Q4G0U5 840 aa15.49■□□□□ 0.07
PAF1-202ENST00000416728 TMEM196Q5HYL7 178 aa15.49■□□□□ 0.07
PAF1-202ENST00000416728 LMBRD2Q68DH5 695 aaPredicted RBP15.49■□□□□ 0.07
PAF1-202ENST00000416728 SCARA3Q6AZY7 606 aa15.49■□□□□ 0.07
PAF1-202ENST00000416728 TRIM68Q6AZZ1 485 aa15.49■□□□□ 0.07
PAF1-202ENST00000416728 CEP68Q76N32 757 aa15.49■□□□□ 0.07
PAF1-202ENST00000416728 OSTM1Q86WC4 334 aa15.49■□□□□ 0.07
PAF1-202ENST00000416728 TRMT2BQ96GJ1 504 aaKnown RBP15.49■□□□□ 0.07
PAF1-202ENST00000416728 FUBP3Q96I24 572 aaKnown RBP eCLIP15.49■□□□□ 0.07
PAF1-202ENST00000416728 RTKNQ9BST9 563 aa15.49■□□□□ 0.07
PAF1-202ENST00000416728 LRRC27Q9C0I9 530 aa15.49■□□□□ 0.07
PAF1-202ENST00000416728 INTS13Q9NVM9 706 aa15.49■□□□□ 0.07
PAF1-202ENST00000416728 DNAH14Q0VDD8 3507 aa15.49■□□□□ 0.07
PAF1-202ENST00000416728 OTOL1A6NHN0 477 aaPredicted RBP15.48■□□□□ 0.07
PAF1-202ENST00000416728 ZNF233A6NK53 670 aa15.48■□□□□ 0.07
PAF1-202ENST00000416728 GABRDO14764 452 aa15.48■□□□□ 0.07
PAF1-202ENST00000416728 TADA3O75528 432 aa15.48■□□□□ 0.07
PAF1-202ENST00000416728 TNNC2P02585 160 aa15.48■□□□□ 0.07
PAF1-202ENST00000416728 NASPP49321 788 aaPredicted RBP15.48■□□□□ 0.07
PAF1-202ENST00000416728 ZNF268Q14587 947 aaPredicted RBP15.48■□□□□ 0.07
PAF1-202ENST00000416728 PDGFRLQ15198 375 aa15.48■□□□□ 0.07
PAF1-202ENST00000416728 CCDC142Q17RM4 750 aa15.48■□□□□ 0.07
PAF1-202ENST00000416728 SOWAHAQ2M3V2 549 aa15.48■□□□□ 0.07
PAF1-202ENST00000416728 DPH6Q7L8W6 267 aa15.48■□□□□ 0.07
PAF1-202ENST00000416728 WDR5BQ86VZ2 330 aa15.48■□□□□ 0.07
PAF1-202ENST00000416728 SCN4BQ8IWT1 228 aa15.48■□□□□ 0.07
PAF1-202ENST00000416728 MYRFLQ96LU7 910 aa15.48■□□□□ 0.07
PAF1-202ENST00000416728 TNMDQ9H2S6 317 aa15.48■□□□□ 0.07
PAF1-202ENST00000416728 TRPC7Q9HCX4 862 aa15.48■□□□□ 0.07
PAF1-202ENST00000416728 FOXD4L1Q9NU39 408 aa15.48■□□□□ 0.07
PAF1-202ENST00000416728 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.48■□□□□ 0.07
PAF1-202ENST00000416728 TRDMT1O14717 391 aaKnown RBP15.47■□□□□ 0.07
PAF1-202ENST00000416728 HCRTO43612 131 aa15.47■□□□□ 0.07
PAF1-202ENST00000416728 STX6O43752 255 aa15.47■□□□□ 0.07
PAF1-202ENST00000416728 ATG13O75143 517 aa15.47■□□□□ 0.07
PAF1-202ENST00000416728 CKMP06732 381 aa15.47■□□□□ 0.07
PAF1-202ENST00000416728 ARSAP15289 507 aa15.47■□□□□ 0.07
PAF1-202ENST00000416728 FAM160A1Q05DH4 1040 aa15.47■□□□□ 0.07
PAF1-202ENST00000416728 MTF1Q14872 753 aa15.47■□□□□ 0.07
PAF1-202ENST00000416728 SURF1Q15526 300 aa15.47■□□□□ 0.07
PAF1-202ENST00000416728 DUOXA2Q1HG44 320 aa15.47■□□□□ 0.07
PAF1-202ENST00000416728 FSTL4Q6MZW2 842 aa15.47■□□□□ 0.07
PAF1-202ENST00000416728 C4orf50Q6ZRC1 276 aa15.47■□□□□ 0.07
PAF1-202ENST00000416728 CBWD2Q8IUF1 395 aa15.47■□□□□ 0.07
PAF1-202ENST00000416728 LINC00301Q8NCQ3 95 aa15.47■□□□□ 0.07
PAF1-202ENST00000416728 GLIS3Q8NEA6 775 aa15.47■□□□□ 0.07
PAF1-202ENST00000416728 TTC16Q8NEE8 873 aa15.47■□□□□ 0.07
PAF1-202ENST00000416728 OR5B17Q8NGF7 314 aa15.47■□□□□ 0.07
PAF1-202ENST00000416728 RIN3Q8TB24 985 aa15.47■□□□□ 0.07
PAF1-202ENST00000416728 HPDLQ96IR7 371 aa15.47■□□□□ 0.07
PAF1-202ENST00000416728 SEMA4GQ9NTN9 838 aa15.47■□□□□ 0.07
PAF1-202ENST00000416728 PTPRJQ12913 1337 aa15.46■□□□□ 0.07
PAF1-202ENST00000416728 TRAV19A0A0A6YYK7 116 aa15.46■□□□□ 0.07
PAF1-202ENST00000416728 USP17L7P0C7H9 530 aa15.46■□□□□ 0.07
PAF1-202ENST00000416728 HOXC13P31276 330 aa15.46■□□□□ 0.07
PAF1-202ENST00000416728 AMPD3Q01432 767 aa15.46■□□□□ 0.07
PAF1-202ENST00000416728 CSRP2Q16527 193 aa15.46■□□□□ 0.07
PAF1-202ENST00000416728 PKN3Q6P5Z2 889 aa15.46■□□□□ 0.07
PAF1-202ENST00000416728 FAM171BQ6P995 826 aa15.46■□□□□ 0.07
PAF1-202ENST00000416728 CPA6Q8N4T0 437 aa15.46■□□□□ 0.07
PAF1-202ENST00000416728 FAM160A2Q8N612 972 aaPredicted RBP15.46■□□□□ 0.07
PAF1-202ENST00000416728 FSIP1Q8NA03 581 aa15.46■□□□□ 0.07
PAF1-202ENST00000416728 NETO1Q8TDF5 533 aa15.46■□□□□ 0.07
PAF1-202ENST00000416728 HPS3Q969F9 1004 aa15.46■□□□□ 0.07
PAF1-202ENST00000416728 EXOC4Q96A65 974 aa15.46■□□□□ 0.07
PAF1-202ENST00000416728 CHFRQ96EP1 664 aa15.46■□□□□ 0.07
PAF1-202ENST00000416728 SYT15Q9BQS2 421 aa15.46■□□□□ 0.07
PAF1-202ENST00000416728 TRIM9Q9C026 710 aa15.46■□□□□ 0.07
PAF1-202ENST00000416728 CUEDC2Q9H467 287 aa15.46■□□□□ 0.07
PAF1-202ENST00000416728 KIAA1586Q9HCI6 787 aa15.46■□□□□ 0.07
PAF1-202ENST00000416728 KBTBD4Q9NVX7 518 aa15.46■□□□□ 0.07
PAF1-202ENST00000416728 HSPBP1Q9NZL4 362 aa15.46■□□□□ 0.07
PAF1-202ENST00000416728 CDH9Q9ULB4 789 aa15.46■□□□□ 0.07
PAF1-202ENST00000416728 SLC8A2Q9UPR5 921 aa15.46■□□□□ 0.07
PAF1-202ENST00000416728 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.45■□□□□ 0.06
PAF1-202ENST00000416728 DCDC2BA2VCK2 349 aa15.45■□□□□ 0.06
PAF1-202ENST00000416728 K7ELQ4 463 aaPredicted RBP15.45■□□□□ 0.06
PAF1-202ENST00000416728 SPTLC2O15270 562 aa15.45■□□□□ 0.06
PAF1-202ENST00000416728 EIF3DO15371 548 aaKnown RBP eCLIP15.45■□□□□ 0.06
PAF1-202ENST00000416728 FOXD2O60548 495 aaPredicted RBP15.45■□□□□ 0.06
PAF1-202ENST00000416728 RNF40O75150 1001 aa15.45■□□□□ 0.06
PAF1-202ENST00000416728 ATP2C2O75185 946 aa15.45■□□□□ 0.06
PAF1-202ENST00000416728 DRD1P21728 446 aa15.45■□□□□ 0.06
PAF1-202ENST00000416728 MAGEA11P43364 429 aa15.45■□□□□ 0.06
PAF1-202ENST00000416728 IFNAR2P48551 515 aa15.45■□□□□ 0.06
PAF1-202ENST00000416728 PSMC1P62191 440 aaKnown RBP15.45■□□□□ 0.06
PAF1-202ENST00000416728 ASIC1P78348 528 aa15.45■□□□□ 0.06
PAF1-202ENST00000416728 MAPRE1Q15691 268 aaKnown RBP15.45■□□□□ 0.06
PAF1-202ENST00000416728 ZNF77Q15935 545 aa15.45■□□□□ 0.06
PAF1-202ENST00000416728 E2F4Q16254 413 aa15.45■□□□□ 0.06
PAF1-202ENST00000416728 VSTM1Q6UX27 236 aa15.45■□□□□ 0.06
PAF1-202ENST00000416728 PRR23CQ6ZRP0 262 aa15.45■□□□□ 0.06
PAF1-202ENST00000416728 WDR49Q8IV35 697 aa15.45■□□□□ 0.06
PAF1-202ENST00000416728 KBTBD7Q8WVZ9 684 aa15.45■□□□□ 0.06
PAF1-202ENST00000416728 MYLPFQ96A32 169 aa15.45■□□□□ 0.06
PAF1-202ENST00000416728 DHX58Q96C10 678 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms